RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 FGF8P55075 233 aaPredicted RBP13.74□□□□□ -0.21
DDB1-220ENST00000542337 STOML3Q8TAV4 291 aa13.74□□□□□ -0.21
DDB1-220ENST00000542337 ARL2-SNX15V9GYD0 113 aa13.74□□□□□ -0.21
DDB1-220ENST00000542337 LRP1BQ9NZR2 4599 aa13.74□□□□□ -0.21
DDB1-220ENST00000542337 IGHV3-38A0A0C4DH36 116 aa13.73□□□□□ -0.21
DDB1-220ENST00000542337 PGPEP1LA6NFU8 196 aa13.73□□□□□ -0.21
DDB1-220ENST00000542337 MGST1P10620 155 aaKnown RBP13.73□□□□□ -0.21
DDB1-220ENST00000542337 ASIPP42127 132 aa13.73□□□□□ -0.21
DDB1-220ENST00000542337 ZNF506Q5JVG8 444 aa13.73□□□□□ -0.21
DDB1-220ENST00000542337 MAP1LC3B2A6NCE7 125 aa13.72□□□□□ -0.21
DDB1-220ENST00000542337 FAM74A7A6NL05 159 aa13.72□□□□□ -0.21
DDB1-220ENST00000542337 RNASE3P12724 160 aaKnown RBP13.72□□□□□ -0.21
DDB1-220ENST00000542337 OR10J3Q5JRS4 329 aa13.72□□□□□ -0.21
DDB1-220ENST00000542337 DPPA3Q6W0C5 159 aa13.72□□□□□ -0.21
DDB1-220ENST00000542337 MAP1LC3BQ9GZQ8 125 aa13.72□□□□□ -0.21
DDB1-220ENST00000542337 A8MWV9 139 aa13.71□□□□□ -0.21
DDB1-220ENST00000542337 LGALSLQ3ZCW2 172 aaPredicted RBP13.71□□□□□ -0.21
DDB1-220ENST00000542337 CDPF1Q6NVV7 123 aa13.71□□□□□ -0.21
DDB1-220ENST00000542337 ZFP30Q9Y2G7 519 aa13.71□□□□□ -0.21
DDB1-220ENST00000542337 HSPG2P98160 4391 aa13.7□□□□□ -0.22
DDB1-220ENST00000542337 B4DEV8 164 aa13.7□□□□□ -0.22
DDB1-220ENST00000542337 UBE2G1P62253 170 aa13.7□□□□□ -0.22
DDB1-220ENST00000542337 PIK3CD-AS1Q5SR53 167 aa13.7□□□□□ -0.22
DDB1-220ENST00000542337 Q86TA4 180 aa13.7□□□□□ -0.22
DDB1-220ENST00000542337 A0A087WTM6 91 aa13.69□□□□□ -0.22
DDB1-220ENST00000542337 IGKV3D-20A0A0C4DH25 116 aa13.69□□□□□ -0.22
DDB1-220ENST00000542337 G3V3Q6 166 aa13.69□□□□□ -0.22
DDB1-220ENST00000542337 CST9LP1Q5W188 147 aa13.69□□□□□ -0.22
DDB1-220ENST00000542337 ZFP2Q6ZN57 461 aa13.69□□□□□ -0.22
DDB1-220ENST00000542337 SYT8Q8NBV8 401 aa13.69□□□□□ -0.22
DDB1-220ENST00000542337 ATP6V0E2Q8NHE4 81 aa13.69□□□□□ -0.22
DDB1-220ENST00000542337 FMC1Q96HJ9 113 aa13.69□□□□□ -0.22
DDB1-220ENST00000542337 TCEAL7Q9BRU2 100 aa13.69□□□□□ -0.22
DDB1-220ENST00000542337 CYTL1Q9NRR1 136 aa13.69□□□□□ -0.22
DDB1-220ENST00000542337 PSCAO43653 123 aa13.68□□□□□ -0.22
DDB1-220ENST00000542337 FHITP49789 147 aa13.68□□□□□ -0.22
DDB1-220ENST00000542337 LINC01556Q5JQF7 62 aa13.68□□□□□ -0.22
DDB1-220ENST00000542337 KRTAP4-5Q9BYR2 181 aa13.68□□□□□ -0.22
DDB1-220ENST00000542337 GTSF1LQ9H1H1 148 aa13.68□□□□□ -0.22
DDB1-220ENST00000542337 IL36BQ9NZH7 164 aa13.68□□□□□ -0.22
DDB1-220ENST00000542337 FAM162BQ5T6X4 162 aa13.67□□□□□ -0.22
DDB1-220ENST00000542337 LELP1Q5T871 98 aa13.67□□□□□ -0.22
DDB1-220ENST00000542337 Q8N1X5 172 aa13.67□□□□□ -0.22
DDB1-220ENST00000542337 PARLQ9H300 379 aa13.66□□□□□ -0.22
DDB1-220ENST00000542337 SCRT2Q9NQ03 307 aa13.66□□□□□ -0.22
DDB1-220ENST00000542337 DNAH5Q8TE73 4624 aa13.65□□□□□ -0.22
DDB1-220ENST00000542337 KRBOX1C9JBD0 128 aa13.65□□□□□ -0.22
DDB1-220ENST00000542337 SMLR1H3BR10 107 aa13.65□□□□□ -0.22
DDB1-220ENST00000542337 M0R036 132 aa13.65□□□□□ -0.22
DDB1-220ENST00000542337 ZNF345Q14585 488 aa13.65□□□□□ -0.22
DDB1-220ENST00000542337 COX8CQ7Z4L0 72 aa13.65□□□□□ -0.22
DDB1-220ENST00000542337 KCNRGQ8N5I3 272 aa13.65□□□□□ -0.22
DDB1-220ENST00000542337 ZC2HC1AQ96GY0 325 aa13.65□□□□□ -0.22
DDB1-220ENST00000542337 TRBV6-1A0A0K0K1D8 114 aa13.64□□□□□ -0.23
DDB1-220ENST00000542337 IBA57-AS1B1ANH7 110 aa13.64□□□□□ -0.23
DDB1-220ENST00000542337 UMAD1C9J7I0 102 aa13.64□□□□□ -0.23
DDB1-220ENST00000542337 H3BVH4 76 aa13.64□□□□□ -0.23
DDB1-220ENST00000542337 RHODO00212 210 aa13.64□□□□□ -0.23
DDB1-220ENST00000542337 SH2D1AO60880 128 aa13.64□□□□□ -0.23
DDB1-220ENST00000542337 ARMS2P0C7Q2 107 aa13.64□□□□□ -0.23
DDB1-220ENST00000542337 AKR1C3P42330 323 aa13.64□□□□□ -0.23
DDB1-220ENST00000542337 OR11H4Q8NGC9 324 aa13.64□□□□□ -0.23
DDB1-220ENST00000542337 SFT2D1Q8WV19 159 aa13.64□□□□□ -0.23
DDB1-220ENST00000542337 PHLDA3Q9Y5J5 127 aa13.64□□□□□ -0.23
DDB1-220ENST00000542337 A0A0D9SG52 128 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 KANTRA0A1W2PQU2 76 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 GAGE12JA6NER3 117 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 IGHV3-30P01768 117 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 IGHV3-33P01772 117 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 SEC11BP0C7V7 166 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 IGHV3-30-3P0DP02 117 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 IGHV3-30-5P0DP03 117 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 FUSP35637 526 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDB1-220ENST00000542337 CRIP1P50238 77 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 GAGE1Q13065 139 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 GAGE4Q13068 117 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 GAGE5Q13069 117 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 GAGE13Q4V321 117 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 DNLZQ5SXM8 178 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 DMRTA1Q5VZB9 504 aa13.63□□□□□ -0.23
DDB1-220ENST00000542337 GRIFINA4D1Z8 144 aa13.62□□□□□ -0.23
DDB1-220ENST00000542337 S100A9P06702 114 aaKnown RBP13.62□□□□□ -0.23
DDB1-220ENST00000542337 TPT1P13693 172 aaKnown RBP13.62□□□□□ -0.23
DDB1-220ENST00000542337 EIF5AP63241 154 aaKnown RBP13.62□□□□□ -0.23
DDB1-220ENST00000542337 Q6ZSN1 163 aa13.62□□□□□ -0.23
DDB1-220ENST00000542337 FAM213BQ8TBF2 198 aa13.62□□□□□ -0.23
DDB1-220ENST00000542337 Q9HAA7 133 aa13.62□□□□□ -0.23
DDB1-220ENST00000542337 HMSDA8MTL9 139 aa13.61□□□□□ -0.23
DDB1-220ENST00000542337 PAGE4O60829 102 aa13.61□□□□□ -0.23
DDB1-220ENST00000542337 PFDN1O60925 122 aa13.61□□□□□ -0.23
DDB1-220ENST00000542337 LTAP01374 205 aa13.61□□□□□ -0.23
DDB1-220ENST00000542337 ZNF674Q2M3X9 581 aa13.61□□□□□ -0.23
DDB1-220ENST00000542337 ZNF471Q9BX82 626 aaPredicted RBP13.61□□□□□ -0.23
DDB1-220ENST00000542337 APOBP04114 4563 aaKnown RBP13.61□□□□□ -0.23
DDB1-220ENST00000542337 ABCA13Q86UQ4 5058 aa13.6□□□□□ -0.23
DDB1-220ENST00000542337 A0A087WWC5 75 aa13.6□□□□□ -0.23
DDB1-220ENST00000542337 MBD3L1Q8WWY6 194 aa13.6□□□□□ -0.23
DDB1-220ENST00000542337 TM2D2Q9BX73 214 aa13.6□□□□□ -0.23
DDB1-220ENST00000542337 SAMD10Q9BYL1 202 aa13.6□□□□□ -0.23
DDB1-220ENST00000542337 JPT2Q9H910 190 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms