RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 H3BNG1 76 aa13.65□□□□□ -0.22
DDX55-207ENST00000540763 H3BVH4 76 aa13.65□□□□□ -0.22
DDX55-207ENST00000540763 CIDEAO60543 219 aa13.65□□□□□ -0.22
DDX55-207ENST00000540763 RPS20P60866 119 aaKnown RBP13.65□□□□□ -0.22
DDX55-207ENST00000540763 ZNF876PQ49A33 203 aa13.65□□□□□ -0.22
DDX55-207ENST00000540763 FAM74A3Q4VXF1 159 aa13.65□□□□□ -0.22
DDX55-207ENST00000540763 TMEM88Q6PEY1 159 aa13.65□□□□□ -0.22
DDX55-207ENST00000540763 GRIFINA4D1Z8 144 aa13.64□□□□□ -0.23
DDX55-207ENST00000540763 P01737 135 aa13.64□□□□□ -0.23
DDX55-207ENST00000540763 ARMS2P0C7Q2 107 aa13.64□□□□□ -0.23
DDX55-207ENST00000540763 HOXA5P20719 270 aa13.64□□□□□ -0.23
DDX55-207ENST00000540763 CEBPGP53567 150 aa13.64□□□□□ -0.23
DDX55-207ENST00000540763 RPL19P84098 196 aaKnown RBP13.64□□□□□ -0.23
DDX55-207ENST00000540763 SLAQ13239 276 aa13.64□□□□□ -0.23
DDX55-207ENST00000540763 OCC1Q8TAD7 63 aa13.64□□□□□ -0.23
DDX55-207ENST00000540763 LYSTQ99698 3801 aa13.63□□□□□ -0.23
DDX55-207ENST00000540763 TMSB15BA0A087X1C1 80 aa13.63□□□□□ -0.23
DDX55-207ENST00000540763 XKRY2A2RUG3 117 aa13.63□□□□□ -0.23
DDX55-207ENST00000540763 ZNF727A8MUV8 499 aa13.63□□□□□ -0.23
DDX55-207ENST00000540763 K7EN84 100 aa13.63□□□□□ -0.23
DDX55-207ENST00000540763 SYT8Q8NBV8 401 aa13.63□□□□□ -0.23
DDX55-207ENST00000540763 SNAI2O43623 268 aa13.62□□□□□ -0.23
DDX55-207ENST00000540763 OR5AL1P0C617 328 aa13.62□□□□□ -0.23
DDX55-207ENST00000540763 LGALS9CQ6DKI2 356 aa13.62□□□□□ -0.23
DDX55-207ENST00000540763 POM121L12Q8N7R1 296 aa13.62□□□□□ -0.23
DDX55-207ENST00000540763 OR4C5Q8NGB2 326 aa13.62□□□□□ -0.23
DDX55-207ENST00000540763 LINC00476Q8WZB0 136 aa13.62□□□□□ -0.23
DDX55-207ENST00000540763 SSBP4Q9BWG4 385 aaPredicted RBP13.62□□□□□ -0.23
DDX55-207ENST00000540763 PHLDA3Q9Y5J5 127 aa13.62□□□□□ -0.23
DDX55-207ENST00000540763 PLECQ15149 4684 aaKnown RBP13.62□□□□□ -0.23
DDX55-207ENST00000540763 A8MWV9 139 aa13.61□□□□□ -0.23
DDX55-207ENST00000540763 RS1O15537 224 aa13.61□□□□□ -0.23
DDX55-207ENST00000540763 SRSF3P84103 164 aaKnown RBP13.61□□□□□ -0.23
DDX55-207ENST00000540763 FHL2Q14192 279 aa13.61□□□□□ -0.23
DDX55-207ENST00000540763 FAM231DQ6ZW35 169 aa13.61□□□□□ -0.23
DDX55-207ENST00000540763 ZFP82Q8N141 532 aa13.61□□□□□ -0.23
DDX55-207ENST00000540763 OR2D3Q8NGH3 330 aa13.61□□□□□ -0.23
DDX55-207ENST00000540763 ZNF479Q96JC4 524 aa13.61□□□□□ -0.23
DDX55-207ENST00000540763 PRO0255Q9UI72 69 aa13.61□□□□□ -0.23
DDX55-207ENST00000540763 SACSQ9NZJ4 4579 aa13.6□□□□□ -0.23
DDX55-207ENST00000540763 TRAV26-1A0A087WT03 109 aa13.6□□□□□ -0.23
DDX55-207ENST00000540763 C9JQL5 133 aa13.6□□□□□ -0.23
DDX55-207ENST00000540763 NXPH4O95158 308 aa13.6□□□□□ -0.23
DDX55-207ENST00000540763 LINC01551Q86U37 167 aa13.6□□□□□ -0.23
DDX55-207ENST00000540763 NUDT10Q8NFP7 164 aa13.6□□□□□ -0.23
DDX55-207ENST00000540763 NUDT11Q96G61 164 aa13.6□□□□□ -0.23
DDX55-207ENST00000540763 TRGV4A0A0C4DH28 118 aa13.59□□□□□ -0.23
DDX55-207ENST00000540763 IGHV3-53P01767 116 aa13.59□□□□□ -0.23
DDX55-207ENST00000540763 SFTA3P0C7M3 94 aa13.59□□□□□ -0.23
DDX55-207ENST00000540763 CFAP126Q5VTH2 177 aa13.59□□□□□ -0.23
DDX55-207ENST00000540763 RPP21Q9H633 154 aaKnown RBP13.59□□□□□ -0.23
DDX55-207ENST00000540763 IGLC6P0CF74 106 aa13.58□□□□□ -0.24
DDX55-207ENST00000540763 P0DMU3 169 aa13.58□□□□□ -0.24
DDX55-207ENST00000540763 FAM231AP0DMU4 169 aa13.58□□□□□ -0.24
DDX55-207ENST00000540763 FAM231CP0DMU5 169 aa13.58□□□□□ -0.24
DDX55-207ENST00000540763 DMRTA1Q5VZB9 504 aa13.58□□□□□ -0.24
DDX55-207ENST00000540763 ZFP2Q6ZN57 461 aa13.58□□□□□ -0.24
DDX55-207ENST00000540763 RNASE7Q9H1E1 156 aaKnown RBP13.58□□□□□ -0.24
DDX55-207ENST00000540763 HHLA3Q9XRX5 114 aa13.58□□□□□ -0.24
DDX55-207ENST00000540763 ALMS1Q8TCU4 4167 aa13.57□□□□□ -0.24
DDX55-207ENST00000540763 CRYBA4P53673 196 aa13.57□□□□□ -0.24
DDX55-207ENST00000540763 TMEM241Q24JQ0 296 aa13.57□□□□□ -0.24
DDX55-207ENST00000540763 CT83Q5H943 113 aa13.57□□□□□ -0.24
DDX55-207ENST00000540763 SOHLH1Q5JUK2 328 aa13.57□□□□□ -0.24
DDX55-207ENST00000540763 FER1L6-AS1Q8NA97 138 aa13.57□□□□□ -0.24
DDX55-207ENST00000540763 VSIG2Q96IQ7 327 aa13.57□□□□□ -0.24
DDX55-207ENST00000540763 NAT8Q9UHE5 227 aa13.57□□□□□ -0.24
DDX55-207ENST00000540763 DNAH1Q9P2D7 4330 aa13.57□□□□□ -0.24
DDX55-207ENST00000540763 A0A1W2PPQ1 181 aa13.56□□□□□ -0.24
DDX55-207ENST00000540763 RHODO00212 210 aa13.56□□□□□ -0.24
DDX55-207ENST00000540763 PAX4O43316 350 aa13.56□□□□□ -0.24
DDX55-207ENST00000540763 A0A0J9YY99 117 aa13.55□□□□□ -0.24
DDX55-207ENST00000540763 F2Z2F3 143 aa13.55□□□□□ -0.24
DDX55-207ENST00000540763 M0R381 172 aa13.55□□□□□ -0.24
DDX55-207ENST00000540763 GATA1P15976 413 aaPredicted RBP13.55□□□□□ -0.24
DDX55-207ENST00000540763 OR10AG1Q8NH19 301 aa13.55□□□□□ -0.24
DDX55-207ENST00000540763 SFRP2Q96HF1 295 aa13.55□□□□□ -0.24
DDX55-207ENST00000540763 OSTCQ9NRP0 149 aa13.55□□□□□ -0.24
DDX55-207ENST00000540763 GATCO43716 136 aaKnown RBP13.54□□□□□ -0.24
DDX55-207ENST00000540763 LY6G6CO95867 125 aa13.54□□□□□ -0.24
DDX55-207ENST00000540763 NUDT3O95989 172 aa13.54□□□□□ -0.24
DDX55-207ENST00000540763 ERVFC1-1P60608 527 aa13.54□□□□□ -0.24
DDX55-207ENST00000540763 UFSP1Q6NVU6 142 aa13.54□□□□□ -0.24
DDX55-207ENST00000540763 UQCC3Q6UW78 93 aa13.54□□□□□ -0.24
DDX55-207ENST00000540763 EPPK1P58107 5090 aaKnown RBP13.53□□□□□ -0.24
DDX55-207ENST00000540763 TRBV6-4A0A1B0GX49 114 aa13.53□□□□□ -0.24
DDX55-207ENST00000540763 A8MWL6 223 aa13.53□□□□□ -0.24
DDX55-207ENST00000540763 GZMBP10144 247 aa13.53□□□□□ -0.24
DDX55-207ENST00000540763 CTRLP40313 264 aa13.53□□□□□ -0.24
DDX55-207ENST00000540763 RPL23P62829 140 aaKnown RBP13.53□□□□□ -0.24
DDX55-207ENST00000540763 CACNG7P62955 275 aa13.53□□□□□ -0.24
DDX55-207ENST00000540763 RNF212Q495C1 297 aa13.53□□□□□ -0.24
DDX55-207ENST00000540763 SPANXN1Q5VSR9 72 aa13.53□□□□□ -0.24
DDX55-207ENST00000540763 ISOC2Q96AB3 205 aa13.53□□□□□ -0.24
DDX55-207ENST00000540763 ICOSQ9Y6W8 199 aa13.53□□□□□ -0.24
DDX55-207ENST00000540763 WDR73Q6P4I2 378 aa13.52□□□□□ -0.25
DDX55-207ENST00000540763 C15orf54Q8N8G6 183 aa13.52□□□□□ -0.25
DDX55-207ENST00000540763 CNFNQ9BYD5 112 aa13.52□□□□□ -0.25
DDX55-207ENST00000540763 A0A096LPF7 62 aa13.51□□□□□ -0.25
DDX55-207ENST00000540763 FAM3BP58499 235 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms