RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 GRIFINA4D1Z8 144 aa12.64□□□□□ -0.39
SNRPA1-203ENST00000540017 TEX46H3BTG2 121 aa12.64□□□□□ -0.39
SNRPA1-203ENST00000540017 ASIPP42127 132 aa12.64□□□□□ -0.39
SNRPA1-203ENST00000540017 RPL35P42766 123 aaKnown RBP12.64□□□□□ -0.39
SNRPA1-203ENST00000540017 SLAQ13239 276 aa12.64□□□□□ -0.39
SNRPA1-203ENST00000540017 PTH2Q96A98 100 aa12.64□□□□□ -0.39
SNRPA1-203ENST00000540017 TMSB15BA0A087X1C1 80 aa12.63□□□□□ -0.39
SNRPA1-203ENST00000540017 RS1O15537 224 aa12.63□□□□□ -0.39
SNRPA1-203ENST00000540017 DNLZQ5SXM8 178 aa12.63□□□□□ -0.39
SNRPA1-203ENST00000540017 CFAP126Q5VTH2 177 aa12.63□□□□□ -0.39
SNRPA1-203ENST00000540017 ICOSQ9Y6W8 199 aa12.63□□□□□ -0.39
SNRPA1-203ENST00000540017 H3BVH4 76 aa12.62□□□□□ -0.39
SNRPA1-203ENST00000540017 BCL2P10415 239 aa12.62□□□□□ -0.39
SNRPA1-203ENST00000540017 S100A4P26447 101 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-203ENST00000540017 MEF2BQ02080 365 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-203ENST00000540017 LINC01559Q495D7 138 aa12.62□□□□□ -0.39
SNRPA1-203ENST00000540017 TXNDC17Q9BRA2 123 aa12.62□□□□□ -0.39
SNRPA1-203ENST00000540017 IL36BQ9NZH7 164 aa12.62□□□□□ -0.39
SNRPA1-203ENST00000540017 LOC100131303A0A0U1RQF7 123 aa12.61□□□□□ -0.39
SNRPA1-203ENST00000540017 ARMS2P0C7Q2 107 aa12.61□□□□□ -0.39
SNRPA1-203ENST00000540017 GATA1P15976 413 aaPredicted RBP12.61□□□□□ -0.39
SNRPA1-203ENST00000540017 IGHV3-73A0A0B4J1V6 119 aa12.6□□□□□ -0.39
SNRPA1-203ENST00000540017 RAB19A4D1S5 217 aa12.6□□□□□ -0.39
SNRPA1-203ENST00000540017 K7EQD1 137 aa12.6□□□□□ -0.39
SNRPA1-203ENST00000540017 RTL8CO15255 209 aa12.6□□□□□ -0.39
SNRPA1-203ENST00000540017 IFNA1P01562 189 aa12.6□□□□□ -0.39
SNRPA1-203ENST00000540017 GYPEP15421 78 aa12.6□□□□□ -0.39
SNRPA1-203ENST00000540017 RPL19P84098 196 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-203ENST00000540017 Q9H8V8 135 aa12.6□□□□□ -0.39
SNRPA1-203ENST00000540017 JPT2Q9H910 190 aa12.6□□□□□ -0.39
SNRPA1-203ENST00000540017 MRPS16Q9Y3D3 137 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-203ENST00000540017 FAT2Q9NYQ8 4349 aa12.6□□□□□ -0.39
SNRPA1-203ENST00000540017 DNAH17Q9UFH2 4485 aa12.59□□□□□ -0.39
SNRPA1-203ENST00000540017 NBDYA0A0U1RRE5 68 aa12.59□□□□□ -0.39
SNRPA1-203ENST00000540017 IGLV2-8P01709 118 aa12.59□□□□□ -0.39
SNRPA1-203ENST00000540017 MRPL23Q16540 153 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-203ENST00000540017 DMRTA1Q5VZB9 504 aa12.59□□□□□ -0.39
SNRPA1-203ENST00000540017 PRR27Q6MZM9 219 aa12.59□□□□□ -0.39
SNRPA1-203ENST00000540017 UPK3BQ9BT76 320 aa12.59□□□□□ -0.39
SNRPA1-203ENST00000540017 SCRT2Q9NQ03 307 aa12.59□□□□□ -0.39
SNRPA1-203ENST00000540017 VAX2Q9UIW0 290 aa12.59□□□□□ -0.39
SNRPA1-203ENST00000540017 PDE6DO43924 150 aa12.58□□□□□ -0.4
SNRPA1-203ENST00000540017 BLOC1S1P78537 153 aa12.58□□□□□ -0.4
SNRPA1-203ENST00000540017 CENPWQ5EE01 88 aa12.58□□□□□ -0.4
SNRPA1-203ENST00000540017 LYPD5Q6UWN5 251 aa12.58□□□□□ -0.4
SNRPA1-203ENST00000540017 LYPD6BQ8NI32 183 aa12.58□□□□□ -0.4
SNRPA1-203ENST00000540017 TRBV20OR9-2A0A075B6H5 130 aa12.57□□□□□ -0.4
SNRPA1-203ENST00000540017 PIK3CD-AS1Q5SR53 167 aa12.57□□□□□ -0.4
SNRPA1-203ENST00000540017 Q6ZSN1 163 aa12.57□□□□□ -0.4
SNRPA1-203ENST00000540017 NEGR1Q7Z3B1 354 aa12.57□□□□□ -0.4
SNRPA1-203ENST00000540017 SLC25A29Q8N8R3 303 aa12.57□□□□□ -0.4
SNRPA1-203ENST00000540017 SAMD10Q9BYL1 202 aa12.57□□□□□ -0.4
SNRPA1-203ENST00000540017 PARLQ9H300 379 aa12.57□□□□□ -0.4
SNRPA1-203ENST00000540017 MED9Q9NWA0 146 aa12.57□□□□□ -0.4
SNRPA1-203ENST00000540017 UFSP1Q6NVU6 142 aa12.56□□□□□ -0.4
SNRPA1-203ENST00000540017 KRTAP1-5Q9BYS1 174 aa12.56□□□□□ -0.4
SNRPA1-203ENST00000540017 CIDEAO60543 219 aa12.55□□□□□ -0.4
SNRPA1-203ENST00000540017 SRIP30626 198 aa12.55□□□□□ -0.4
SNRPA1-203ENST00000540017 PCNPQ8WW12 178 aaKnown RBP12.55□□□□□ -0.4
SNRPA1-203ENST00000540017 TRBV6-4A0A1B0GX49 114 aa12.54□□□□□ -0.4
SNRPA1-203ENST00000540017 A8MWV9 139 aa12.54□□□□□ -0.4
SNRPA1-203ENST00000540017 MGST1P10620 155 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-203ENST00000540017 TAGLN2P37802 199 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-203ENST00000540017 GNG4P50150 75 aa12.54□□□□□ -0.4
SNRPA1-203ENST00000540017 C1orf134Q5TEV5 83 aa12.54□□□□□ -0.4
SNRPA1-203ENST00000540017 PHLDA3Q9Y5J5 127 aa12.54□□□□□ -0.4
SNRPA1-203ENST00000540017 RBFOX3A6NFN3 312 aa12.53□□□□□ -0.4
SNRPA1-203ENST00000540017 M0R381 172 aa12.53□□□□□ -0.4
SNRPA1-203ENST00000540017 NXPH4O95158 308 aa12.53□□□□□ -0.4
SNRPA1-203ENST00000540017 ZFP2Q6ZN57 461 aa12.53□□□□□ -0.4
SNRPA1-203ENST00000540017 LINC00336Q6ZUF6 198 aa12.53□□□□□ -0.4
SNRPA1-203ENST00000540017 SYT8Q8NBV8 401 aa12.53□□□□□ -0.4
SNRPA1-203ENST00000540017 Q9UF83 564 aa12.53□□□□□ -0.4
SNRPA1-203ENST00000540017 HECTD4Q9Y4D8 3996 aa12.53□□□□□ -0.4
SNRPA1-203ENST00000540017 C19orf71A6NCJ1 209 aa12.52□□□□□ -0.41
SNRPA1-203ENST00000540017 CXCL1P09341 107 aa12.52□□□□□ -0.41
SNRPA1-203ENST00000540017 MED14OSP0DP75 135 aa12.52□□□□□ -0.41
SNRPA1-203ENST00000540017 OR10AG1Q8NH19 301 aa12.52□□□□□ -0.41
SNRPA1-203ENST00000540017 SFRP2Q96HF1 295 aa12.52□□□□□ -0.41
SNRPA1-203ENST00000540017 A0A087WWL8 130 aa12.51□□□□□ -0.41
SNRPA1-203ENST00000540017 MUC21A0A0G2JKD1 596 aa12.51□□□□□ -0.41
SNRPA1-203ENST00000540017 MUC21A0A140T8X8 626 aa12.51□□□□□ -0.41
SNRPA1-203ENST00000540017 PRSS29PA6NIE9 313 aa12.51□□□□□ -0.41
SNRPA1-203ENST00000540017 CRYGDP07320 174 aa12.51□□□□□ -0.41
SNRPA1-203ENST00000540017 RHOHQ15669 191 aa12.51□□□□□ -0.41
SNRPA1-203ENST00000540017 SMIM12Q96EX1 92 aa12.51□□□□□ -0.41
SNRPA1-203ENST00000540017 PRADC1Q9BSG0 188 aa12.51□□□□□ -0.41
SNRPA1-203ENST00000540017 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
SNRPA1-203ENST00000540017 A0A1B0GVY2 172 aa12.5□□□□□ -0.41
SNRPA1-203ENST00000540017 SIVA1O15304 175 aa12.5□□□□□ -0.41
SNRPA1-203ENST00000540017 SNAI2O43623 268 aa12.5□□□□□ -0.41
SNRPA1-203ENST00000540017 GZMBP10144 247 aa12.5□□□□□ -0.41
SNRPA1-203ENST00000540017 ZFP82Q8N141 532 aa12.5□□□□□ -0.41
SNRPA1-203ENST00000540017 C14orf178Q8N769 122 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-203ENST00000540017 TOR2AQ5JU69 321 aa12.49□□□□□ -0.41
SNRPA1-203ENST00000540017 FAM74A4Q5TZK3 123 aa12.49□□□□□ -0.41
SNRPA1-203ENST00000540017 WFDC10BQ8IUB3 73 aa12.49□□□□□ -0.41
SNRPA1-203ENST00000540017 C6orf223Q8N319 242 aa12.49□□□□□ -0.41
SNRPA1-203ENST00000540017 K7EN84 100 aa12.48□□□□□ -0.41
SNRPA1-203ENST00000540017 OR5AL1P0C617 328 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms