RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 IGHV3-33P01772 117 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 PFN1P07737 140 aaKnown RBP7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 H2AFB1P0C5Y9 115 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 IGHV3-30-3P0DP02 117 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 IGHV3-30-5P0DP03 117 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 CDC34P49427 236 aaPredicted RBP7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 ZNF138P52744 262 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 LAGE3Q14657 143 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 ZNF726P1Q15940 193 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 GCSAMLQ5JQS6 135 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 OR10J3Q5JRS4 329 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 MUC21Q5SSG8 566 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 LYPD6BQ8NI32 183 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 MBD3L1Q8WWY6 194 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 CHAC1Q9BUX1 264 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 MED9Q9NWA0 146 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 TRAV1-1A0A0B4J248 108 aa7.66□□□□□ -1.18
CLSTN3-209ENST00000539982 CTXND1A0A1B0GTU2 59 aa7.66□□□□□ -1.18
CLSTN3-209ENST00000539982 PYYP10082 97 aa7.66□□□□□ -1.18
CLSTN3-209ENST00000539982 COMMD7Q86VX2 200 aa7.66□□□□□ -1.18
CLSTN3-209ENST00000539982 SFT2D1Q8WV19 159 aa7.66□□□□□ -1.18
CLSTN3-209ENST00000539982 RAB24Q969Q5 203 aa7.66□□□□□ -1.18
CLSTN3-209ENST00000539982 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.65□□□□□ -1.18
CLSTN3-209ENST00000539982 TRGV11A0A075B6L2 103 aa7.65□□□□□ -1.18
CLSTN3-209ENST00000539982 MAP1LC3B2A6NCE7 125 aa7.65□□□□□ -1.18
CLSTN3-209ENST00000539982 LECT2O14960 151 aa7.65□□□□□ -1.18
CLSTN3-209ENST00000539982 TMEM183BQ1AE95 376 aa7.65□□□□□ -1.18
CLSTN3-209ENST00000539982 LINC01620Q4KN68 170 aa7.65□□□□□ -1.18
CLSTN3-209ENST00000539982 LELP1Q5T871 98 aa7.65□□□□□ -1.18
CLSTN3-209ENST00000539982 FAM159AQ6UWV7 190 aa7.65□□□□□ -1.18
CLSTN3-209ENST00000539982 TMEM183AQ8IXX5 376 aa7.65□□□□□ -1.18
CLSTN3-209ENST00000539982 SLC7A5P1Q8MH63 180 aa7.65□□□□□ -1.18
CLSTN3-209ENST00000539982 CIRBP-AS1Q8TBR5 109 aa7.65□□□□□ -1.18
CLSTN3-209ENST00000539982 MAP1LC3BQ9GZQ8 125 aa7.65□□□□□ -1.18
CLSTN3-209ENST00000539982 IGHV3-16A0A0C4DH30 117 aa7.64□□□□□ -1.19
CLSTN3-209ENST00000539982 A0A1B0GV50 99 aa7.64□□□□□ -1.19
CLSTN3-209ENST00000539982 M0R2P5 195 aa7.64□□□□□ -1.19
CLSTN3-209ENST00000539982 GATA1P15976 413 aaPredicted RBP7.64□□□□□ -1.19
CLSTN3-209ENST00000539982 TAS2R45P59539 299 aa7.64□□□□□ -1.19
CLSTN3-209ENST00000539982 MIR17HGQ75NE6 70 aa7.64□□□□□ -1.19
CLSTN3-209ENST00000539982 Q8TAT8 98 aa7.64□□□□□ -1.19
CLSTN3-209ENST00000539982 TRAV8-3A0A0A6YYJ7 113 aa7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 RAB19A4D1S5 217 aa7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 RBFOX3A6NFN3 312 aa7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 HMGB3O15347 200 aaKnown RBP7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 RS1O15537 224 aa7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 EIF3GO75821 320 aaKnown RBP eCLIP7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 CXorf1O96002 111 aa7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 NBEAP1P0C6P0 100 aa7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 STAG3L2P0CL84 134 aa7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 STAG3L3P0CL85 134 aa7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 FGF8P55075 233 aaPredicted RBP7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 CCL20P78556 96 aa7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 KHDC3LQ587J8 217 aa7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 Q6AWC8 147 aa7.63□□□□□ -1.19
CLSTN3-209ENST00000539982 RBAKDNA6NC62 111 aa7.62□□□□□ -1.19
CLSTN3-209ENST00000539982 IGLV2-8P01709 118 aa7.62□□□□□ -1.19
CLSTN3-209ENST00000539982 ARL14EPLP0DKL9 152 aa7.62□□□□□ -1.19
CLSTN3-209ENST00000539982 SLC25A29Q8N8R3 303 aa7.62□□□□□ -1.19
CLSTN3-209ENST00000539982 BAALCQ8WXS3 180 aa7.62□□□□□ -1.19
CLSTN3-209ENST00000539982 PRADC1Q9BSG0 188 aa7.62□□□□□ -1.19
CLSTN3-209ENST00000539982 SLC25A2Q9BXI2 301 aa7.62□□□□□ -1.19
CLSTN3-209ENST00000539982 GTSF1LQ9H1H1 148 aa7.62□□□□□ -1.19
CLSTN3-209ENST00000539982 COX11Q9Y6N1 276 aa7.62□□□□□ -1.19
CLSTN3-209ENST00000539982 TRBV6-4A0A1B0GX49 114 aa7.61□□□□□ -1.19
CLSTN3-209ENST00000539982 FBLL1A6NHQ2 334 aaKnown RBP7.61□□□□□ -1.19
CLSTN3-209ENST00000539982 GNRH2O43555 120 aa7.61□□□□□ -1.19
CLSTN3-209ENST00000539982 IFNA1P01562 189 aa7.61□□□□□ -1.19
CLSTN3-209ENST00000539982 GCHFRP30047 84 aa7.61□□□□□ -1.19
CLSTN3-209ENST00000539982 TOR2AQ5JU69 321 aa7.61□□□□□ -1.19
CLSTN3-209ENST00000539982 UQCC3Q6UW78 93 aa7.61□□□□□ -1.19
CLSTN3-209ENST00000539982 PQLC2Q6ZP29 291 aa7.61□□□□□ -1.19
CLSTN3-209ENST00000539982 Q8N976 141 aa7.61□□□□□ -1.19
CLSTN3-209ENST00000539982 FAM167A-AS1Q96KT0 104 aa7.61□□□□□ -1.19
CLSTN3-209ENST00000539982 FAM210AQ96ND0 272 aa7.61□□□□□ -1.19
CLSTN3-209ENST00000539982 GNG13Q9P2W3 67 aa7.61□□□□□ -1.19
CLSTN3-209ENST00000539982 RNF213Q63HN8 5207 aa7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 OR7C2O60412 319 aa7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 CIDEAO60543 219 aa7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 CSN1S1P47710 185 aa7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 PEA15Q15121 130 aa7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 RHOHQ15669 191 aa7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 ATP6V0E2Q8NHE4 81 aa7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 EIF5A2Q9GZV4 153 aaKnown RBP7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 OR51M1Q9H341 326 aa7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 MANBALQ9NQG1 85 aa7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 TMEM167BQ9NRX6 74 aa7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 NAGKQ9UJ70 344 aa7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 LENEPQ9Y5L5 61 aa7.6□□□□□ -1.19
CLSTN3-209ENST00000539982 IGLV2-11P01706 119 aa7.59□□□□□ -1.19
CLSTN3-209ENST00000539982 BCL2P10415 239 aa7.59□□□□□ -1.19
CLSTN3-209ENST00000539982 TAGLN2P37802 199 aaKnown RBP7.59□□□□□ -1.19
CLSTN3-209ENST00000539982 RPL37AP61513 92 aaKnown RBP7.59□□□□□ -1.19
CLSTN3-209ENST00000539982 ZNF506Q5JVG8 444 aa7.59□□□□□ -1.19
CLSTN3-209ENST00000539982 Q8N3U1 123 aa7.59□□□□□ -1.19
CLSTN3-209ENST00000539982 DAZAP1Q96EP5 407 aaKnown RBP7.59□□□□□ -1.19
CLSTN3-209ENST00000539982 PAXXQ9BUH6 204 aa7.59□□□□□ -1.19
CLSTN3-209ENST00000539982 TREM1Q9NP99 234 aa7.59□□□□□ -1.19
CLSTN3-209ENST00000539982 VAX2Q9UIW0 290 aa7.59□□□□□ -1.19
CLSTN3-209ENST00000539982 GGTLC3B5MD39 225 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms