RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 PGLYRP4Q96LB8 373 aa7.74□□□□□ -1.17
LEMD3-202ENST00000539442 SSBP4Q9BWG4 385 aaPredicted RBP7.74□□□□□ -1.17
LEMD3-202ENST00000539442 CNFNQ9BYD5 112 aa7.74□□□□□ -1.17
LEMD3-202ENST00000539442 TP53TG3Q9ULZ0 132 aa7.74□□□□□ -1.17
LEMD3-202ENST00000539442 A0A1B0GW15 77 aa7.73□□□□□ -1.17
LEMD3-202ENST00000539442 GNRH2O43555 120 aa7.73□□□□□ -1.17
LEMD3-202ENST00000539442 RNASE3P12724 160 aaKnown RBP7.73□□□□□ -1.17
LEMD3-202ENST00000539442 COX19Q49B96 90 aa7.73□□□□□ -1.17
LEMD3-202ENST00000539442 RASL11AQ6T310 242 aa7.73□□□□□ -1.17
LEMD3-202ENST00000539442 LYZL1Q6UWQ5 148 aa7.73□□□□□ -1.17
LEMD3-202ENST00000539442 Q6ZWC4 215 aa7.73□□□□□ -1.17
LEMD3-202ENST00000539442 TPPP3Q9BW30 176 aa7.73□□□□□ -1.17
LEMD3-202ENST00000539442 SCRT2Q9NQ03 307 aa7.73□□□□□ -1.17
LEMD3-202ENST00000539442 MGAM2Q2M2H8 2515 aa7.73□□□□□ -1.17
LEMD3-202ENST00000539442 DNAH3Q8TD57 4116 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 IGHV3OR16-12A0A075B7B8 117 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 TGIF2-C20orf24A0A0A6YYL0 155 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 A0A1B0GUT8 65 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 SMIM9A6NGZ8 99 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 COLCA2A8K830 154 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 H3BVH4 76 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 ARMS2P0C7Q2 107 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 FRMD6-AS1P0C7T7 363 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 CACNG7P62955 275 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 ZNF415Q09FC8 603 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 RIGQ13278 110 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 ZNF493Q6ZR52 646 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 TMEM263Q8WUH6 116 aaKnown RBP7.72□□□□□ -1.17
LEMD3-202ENST00000539442 FAM210BQ96KR6 192 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 C9orf85Q96MD7 179 aa7.72□□□□□ -1.17
LEMD3-202ENST00000539442 IGHV4-4A0A075B6R2 117 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 A0A1B0GXF2 115 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 K7EIL1 84 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 S100A8P05109 93 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 HTN1P15515 57 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 HBBP68871 147 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 RRN3P1Q2M238 152 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 MRPL54Q6P161 138 aaKnown RBP7.71□□□□□ -1.18
LEMD3-202ENST00000539442 C11orf72Q8NBR9 251 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 C16orf74Q96GX8 76 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 RCHY1Q96PM5 261 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 MDFICQ9P1T7 246 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 TP53TG1Q9Y2A0 90 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 PHLDA3Q9Y5J5 127 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 DNHD1Q96M86 4753 aa7.71□□□□□ -1.18
LEMD3-202ENST00000539442 SPINK4O60575 86 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 NXPH4O95158 308 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 TNP2Q05952 138 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 DEFB135Q30KP9 77 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 PIK3CD-AS1Q5SR53 167 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 SPANXN1Q5VSR9 72 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 ZFP82Q8N141 532 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 SYT8Q8NBV8 401 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 OR10AG1Q8NH19 301 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 IL17DQ8TAD2 202 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 RNASE8Q8TDE3 154 aaKnown RBP7.7□□□□□ -1.18
LEMD3-202ENST00000539442 PTH2Q96A98 100 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 RNF183Q96D59 192 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 SPXQ9BT56 116 aa7.7□□□□□ -1.18
LEMD3-202ENST00000539442 TIMM8BQ9Y5J9 83 aaPredicted RBP7.7□□□□□ -1.18
LEMD3-202ENST00000539442 MT-ND6P03923 174 aa7.69□□□□□ -1.18
LEMD3-202ENST00000539442 AZU1P20160 251 aa7.69□□□□□ -1.18
LEMD3-202ENST00000539442 RAB5AP20339 215 aa7.69□□□□□ -1.18
LEMD3-202ENST00000539442 NTF3P20783 257 aa7.69□□□□□ -1.18
LEMD3-202ENST00000539442 KRTAP5-3Q6L8H2 238 aa7.69□□□□□ -1.18
LEMD3-202ENST00000539442 GATD1Q8NB37 220 aa7.69□□□□□ -1.18
LEMD3-202ENST00000539442 NDUFAF3Q9BU61 184 aa7.69□□□□□ -1.18
LEMD3-202ENST00000539442 X6R8D5 127 aa7.69□□□□□ -1.18
LEMD3-202ENST00000539442 SNURFLB1AK76 121 aa7.68□□□□□ -1.18
LEMD3-202ENST00000539442 M0R2P5 195 aa7.68□□□□□ -1.18
LEMD3-202ENST00000539442 M0R381 172 aa7.68□□□□□ -1.18
LEMD3-202ENST00000539442 SPRY2O43597 315 aa7.68□□□□□ -1.18
LEMD3-202ENST00000539442 HLA-DQA1P01909 254 aa7.68□□□□□ -1.18
LEMD3-202ENST00000539442 PRB2P02812 416 aaPredicted RBP7.68□□□□□ -1.18
LEMD3-202ENST00000539442 TRGC1P0CF51 173 aa7.68□□□□□ -1.18
LEMD3-202ENST00000539442 MIFP14174 115 aa7.68□□□□□ -1.18
LEMD3-202ENST00000539442 DAZ2Q13117 558 aaKnown RBP7.68□□□□□ -1.18
LEMD3-202ENST00000539442 TWIST1Q15672 202 aa7.68□□□□□ -1.18
LEMD3-202ENST00000539442 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.68□□□□□ -1.18
LEMD3-202ENST00000539442 GNB1LQ9BYB4 327 aa7.68□□□□□ -1.18
LEMD3-202ENST00000539442 GSN-AS1Q9NRJ2 163 aa7.68□□□□□ -1.18
LEMD3-202ENST00000539442 NOTCH1P46531 2555 aa7.67□□□□□ -1.18
LEMD3-202ENST00000539442 MUC21A0A0G2JKD1 596 aa7.67□□□□□ -1.18
LEMD3-202ENST00000539442 MUC21A0A140T8X8 626 aa7.67□□□□□ -1.18
LEMD3-202ENST00000539442 PRM2P04554 102 aa7.67□□□□□ -1.18
LEMD3-202ENST00000539442 RPS10P46783 165 aaKnown RBP7.67□□□□□ -1.18
LEMD3-202ENST00000539442 CAMPP49913 170 aa7.67□□□□□ -1.18
LEMD3-202ENST00000539442 TMEM136Q6ZRR5 245 aa7.67□□□□□ -1.18
LEMD3-202ENST00000539442 SMIM15Q7Z3B0 74 aa7.67□□□□□ -1.18
LEMD3-202ENST00000539442 OR11H2Q8NH07 326 aa7.67□□□□□ -1.18
LEMD3-202ENST00000539442 AP1S3Q96PC3 154 aa7.67□□□□□ -1.18
LEMD3-202ENST00000539442 NBEAL1Q6ZS30 2694 aa7.67□□□□□ -1.18
LEMD3-202ENST00000539442 PLAC8L1A1L4L8 177 aa7.66□□□□□ -1.18
LEMD3-202ENST00000539442 RAB4BP61018 213 aa7.66□□□□□ -1.18
LEMD3-202ENST00000539442 LGALS9BQ3B8N2 356 aa7.66□□□□□ -1.18
LEMD3-202ENST00000539442 ZNF876PQ49A33 203 aa7.66□□□□□ -1.18
LEMD3-202ENST00000539442 DEFB121Q5J5C9 76 aa7.66□□□□□ -1.18
LEMD3-202ENST00000539442 OVOL2Q9BRP0 275 aa7.66□□□□□ -1.18
LEMD3-202ENST00000539442 TMEM191AQ9H0A3 160 aa7.66□□□□□ -1.18
LEMD3-202ENST00000539442 MSRB1Q9NZV6 116 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms