RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 COX11Q9Y6N1 276 aa13.4□□□□□ -0.26
GNE-204ENST00000539208 ZFYVE26Q68DK2 2539 aa13.4□□□□□ -0.26
GNE-204ENST00000539208 PRRC2AP48634 2157 aaKnown RBP13.4□□□□□ -0.26
GNE-204ENST00000539208 PPP1R17O96001 155 aa13.39□□□□□ -0.27
GNE-204ENST00000539208 SUMO2P61956 95 aaKnown RBP13.39□□□□□ -0.27
GNE-204ENST00000539208 USP9YO00507 2555 aaPredicted RBP13.39□□□□□ -0.27
GNE-204ENST00000539208 C7orf71A4D174 169 aa13.39□□□□□ -0.27
GNE-204ENST00000539208 ZNF688P0C7X2 276 aa13.39□□□□□ -0.27
GNE-204ENST00000539208 HOXD3P31249 432 aaPredicted RBP13.39□□□□□ -0.27
GNE-204ENST00000539208 FAM208BQ5VWN6 2430 aa13.39□□□□□ -0.27
GNE-204ENST00000539208 SIVA1O15304 175 aa13.38□□□□□ -0.27
GNE-204ENST00000539208 SPRY2O43597 315 aa13.38□□□□□ -0.27
GNE-204ENST00000539208 NPSP0C0P6 89 aa13.38□□□□□ -0.27
GNE-204ENST00000539208 ORMDL2Q53FV1 153 aa13.38□□□□□ -0.27
GNE-204ENST00000539208 Q96MF0 132 aa13.38□□□□□ -0.27
GNE-204ENST00000539208 LRRK2Q5S007 2527 aa13.38□□□□□ -0.27
GNE-204ENST00000539208 OR9G4Q8NGQ1 327 aa13.38□□□□□ -0.27
GNE-204ENST00000539208 HHLA3Q9XRX5 114 aa13.38□□□□□ -0.27
GNE-204ENST00000539208 KIF25-AS1Q9Y6Z4 181 aa13.38□□□□□ -0.27
GNE-204ENST00000539208 CSMD2Q7Z408 3487 aa13.37□□□□□ -0.27
GNE-204ENST00000539208 KRTAP1-3Q8IUG1 177 aa13.37□□□□□ -0.27
GNE-204ENST00000539208 FOXC2Q99958 501 aa13.37□□□□□ -0.27
GNE-204ENST00000539208 TRAV12-3A0A0B4J271 114 aa13.36□□□□□ -0.27
GNE-204ENST00000539208 IGKCP01834 107 aa13.36□□□□□ -0.27
GNE-204ENST00000539208 DPM2O94777 84 aa13.35□□□□□ -0.27
GNE-204ENST00000539208 DUSP14O95147 198 aaKnown RBP13.35□□□□□ -0.27
GNE-204ENST00000539208 LINC00315P59091 139 aa13.35□□□□□ -0.27
GNE-204ENST00000539208 POLQO75417 2590 aa13.35□□□□□ -0.27
GNE-204ENST00000539208 MGPP08493 103 aa13.35□□□□□ -0.27
GNE-204ENST00000539208 RPL39LQ96EH5 51 aaKnown RBP13.35□□□□□ -0.27
GNE-204ENST00000539208 CD7P09564 240 aa13.34□□□□□ -0.27
GNE-204ENST00000539208 RPL32P62910 135 aaKnown RBP13.34□□□□□ -0.27
GNE-204ENST00000539208 TMEM97Q5BJF2 176 aa13.34□□□□□ -0.27
GNE-204ENST00000539208 TOMM6Q96B49 74 aa13.34□□□□□ -0.27
GNE-204ENST00000539208 ZANQ9Y493 2812 aa13.34□□□□□ -0.27
GNE-204ENST00000539208 CDKN1BP46527 198 aa13.34□□□□□ -0.27
GNE-204ENST00000539208 ZNF124Q15973 351 aa13.34□□□□□ -0.27
GNE-204ENST00000539208 FOXI2Q6ZQN5 318 aa13.34□□□□□ -0.27
GNE-204ENST00000539208 WFDC12Q8WWY7 111 aa13.34□□□□□ -0.27
GNE-204ENST00000539208 C9orf85Q96MD7 179 aa13.34□□□□□ -0.27
GNE-204ENST00000539208 A0A087WX48 190 aa13.33□□□□□ -0.28
GNE-204ENST00000539208 TRAV12-1A0A0B4J245 112 aa13.33□□□□□ -0.28
GNE-204ENST00000539208 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.33□□□□□ -0.28
GNE-204ENST00000539208 TAX1BP3O14907 124 aa13.33□□□□□ -0.28
GNE-204ENST00000539208 IGHV3-16A0A0C4DH30 117 aa13.32□□□□□ -0.28
GNE-204ENST00000539208 SEC11AP67812 179 aa13.32□□□□□ -0.28
GNE-204ENST00000539208 TCTEX1D4Q5JR98 221 aa13.32□□□□□ -0.28
GNE-204ENST00000539208 ADAMTSL5Q6ZMM2 481 aa13.32□□□□□ -0.28
GNE-204ENST00000539208 Q6ZVH6 145 aa13.32□□□□□ -0.28
GNE-204ENST00000539208 DUX5Q96PT3 197 aa13.32□□□□□ -0.28
GNE-204ENST00000539208 MUC4Q99102 2169 aa13.32□□□□□ -0.28
GNE-204ENST00000539208 CENPEQ02224 2701 aa13.32□□□□□ -0.28
GNE-204ENST00000539208 NMUP48645 174 aa13.32□□□□□ -0.28
GNE-204ENST00000539208 TMEM86BQ8N661 226 aa13.32□□□□□ -0.28
GNE-204ENST00000539208 PTPN13Q12923 2485 aa13.31□□□□□ -0.28
GNE-204ENST00000539208 PCP2Q8IVA1 136 aa13.31□□□□□ -0.28
GNE-204ENST00000539208 TEX29Q8N6K0 151 aa13.31□□□□□ -0.28
GNE-204ENST00000539208 HLA-DRB4P13762 266 aa13.31□□□□□ -0.28
GNE-204ENST00000539208 MRPL35Q9NZE8 188 aaKnown RBP13.31□□□□□ -0.28
GNE-204ENST00000539208 HLA-DRB4X5D2U9 266 aa13.31□□□□□ -0.28
GNE-204ENST00000539208 HSD52Q0P140 79 aa13.3□□□□□ -0.28
GNE-204ENST00000539208 AMTNQ6UX39 209 aa13.3□□□□□ -0.28
GNE-204ENST00000539208 MXRA5Q9NR99 2828 aa13.3□□□□□ -0.28
GNE-204ENST00000539208 IGHV1OR15-1A0A075B7D0 117 aa13.3□□□□□ -0.28
GNE-204ENST00000539208 TRAV2A0A0B4J234 112 aa13.3□□□□□ -0.28
GNE-204ENST00000539208 LINC01619G3V211 115 aa13.3□□□□□ -0.28
GNE-204ENST00000539208 IGKV3-20P01619 116 aa13.3□□□□□ -0.28
GNE-204ENST00000539208 PLNP26678 52 aa13.3□□□□□ -0.28
GNE-204ENST00000539208 UBE2V1Q13404 147 aa13.3□□□□□ -0.28
GNE-204ENST00000539208 C4orf3Q8WVX3 66 aa13.3□□□□□ -0.28
GNE-204ENST00000539208 SCGB3A1Q96QR1 104 aa13.3□□□□□ -0.28
GNE-204ENST00000539208 CSTL1Q9H114 145 aa13.3□□□□□ -0.28
GNE-204ENST00000539208 NAV2Q8IVL1 2488 aa13.29□□□□□ -0.28
GNE-204ENST00000539208 TRAV12-2A0A075B6T6 113 aa13.29□□□□□ -0.28
GNE-204ENST00000539208 SLURP1P55000 103 aa13.29□□□□□ -0.28
GNE-204ENST00000539208 SYT8Q8NBV8 401 aa13.29□□□□□ -0.28
GNE-204ENST00000539208 IGKV2D-26A0A0A0MRZ7 120 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 H7C1H1 209 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 TCTAP57738 103 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 SPINK13Q1W4C9 94 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 ZC2HC1BQ5TFG8 222 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 C18orf65Q6ZTR6 163 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 Q8N1Y9 231 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 JPT2Q9H910 190 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 TMEM160Q9NX00 188 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 LINC01549A6NIU2 74 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 A8MTW9 85 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 POLR2KP53803 58 aaKnown RBP13.28□□□□□ -0.28
GNE-204ENST00000539208 SUMO4Q6EEV6 95 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 C2orf66Q6UXQ4 117 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 MDFICQ9P1T7 246 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 HIGD1BQ9P298 99 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 PEMTQ9UBM1 199 aa13.28□□□□□ -0.28
GNE-204ENST00000539208 NEXN-AS1Q8NBZ9 246 aa13.27□□□□□ -0.28
GNE-204ENST00000539208 F8VRH5 84 aa13.27□□□□□ -0.29
GNE-204ENST00000539208 CCL25O15444 150 aa13.27□□□□□ -0.29
GNE-204ENST00000539208 PTTG1IPP53801 180 aa13.27□□□□□ -0.29
GNE-204ENST00000539208 DEFB136Q30KP8 78 aa13.27□□□□□ -0.29
GNE-204ENST00000539208 GTSCR1Q86UQ5 136 aa13.27□□□□□ -0.29
GNE-204ENST00000539208 OR11H1Q8NG94 326 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms