RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 EBI3Q14213 229 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 RUSC1-AS1Q66K80 236 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 C3orf22Q8N5N4 141 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 CNEP1R1Q8N9A8 125 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 NPBQ8NG41 125 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 OR13C6PQ8NH95 151 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 NTN5Q8WTR8 489 aaPredicted RBP5.1□□□□□ -1.59
USP28-207ENST00000538475 LINC00526Q96FQ7 95 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 LINC01587Q99440 93 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 KIR2DL4Q99706 377 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 IGLV11-55A0A075B6I3 123 aa5.09□□□□□ -1.59
USP28-207ENST00000538475 IGKV2-40A0A087WW87 121 aaPredicted RBP5.09□□□□□ -1.59
USP28-207ENST00000538475 IGKV3D-20A0A0C4DH25 116 aa5.09□□□□□ -1.59
USP28-207ENST00000538475 IGHV7-4-1A0A0J9YVY3 117 aa5.09□□□□□ -1.59
USP28-207ENST00000538475 MBD3L4A6NDZ8 208 aaPredicted RBP5.09□□□□□ -1.59
USP28-207ENST00000538475 MBD3L3A6NE82 208 aaPredicted RBP5.09□□□□□ -1.59
USP28-207ENST00000538475 MBD3L5A6NJ08 208 aaPredicted RBP5.09□□□□□ -1.59
USP28-207ENST00000538475 BRI3O95415 125 aa5.09□□□□□ -1.59
USP28-207ENST00000538475 IGKV2D-40P01614 121 aaPredicted RBP5.09□□□□□ -1.59
USP28-207ENST00000538475 IGHV1-69P01742 117 aa5.09□□□□□ -1.59
USP28-207ENST00000538475 LGALS3P17931 250 aaKnown RBP5.09□□□□□ -1.59
USP28-207ENST00000538475 EFNA4P52798 201 aa5.09□□□□□ -1.59
USP28-207ENST00000538475 SPANXN1Q5VSR9 72 aa5.09□□□□□ -1.59
USP28-207ENST00000538475 GFRALQ6UXV0 394 aa5.09□□□□□ -1.59
USP28-207ENST00000538475 LINC00643Q86TS7 51 aa5.09□□□□□ -1.59
USP28-207ENST00000538475 TMEM219Q86XT9 240 aa5.09□□□□□ -1.59
USP28-207ENST00000538475 MBD3L2Q8NHZ7 208 aaPredicted RBP5.09□□□□□ -1.59
USP28-207ENST00000538475 AHCTF1Q8WYP5 2266 aa5.09□□□□□ -1.59
USP28-207ENST00000538475 A0A0J9YXY3 114 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 IGIPA6NJ69 53 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 C17orf100A8MU93 164 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 TMEM178BH3BS89 294 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 BUB1B-PAK6H3BSN5 160 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 J3QQQ9 107 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 NDUFA7O95182 113 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 GATA1P15976 413 aaPredicted RBP5.08□□□□□ -1.6
USP28-207ENST00000538475 CCL3L1P16619 93 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 ZNF876PQ49A33 203 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 C2orf82Q6UX34 121 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 SDIM1Q6ZPB5 146 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 C9orf106Q8NAJ2 232 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 DEFB108BQ8NET1 73 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 ZNRF2Q8NHG8 242 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 PPDPFQ9H3Y8 114 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 C21orf62Q9NYP8 219 aa5.08□□□□□ -1.6
USP28-207ENST00000538475 CSDC2Q9Y534 153 aaKnown RBP5.08□□□□□ -1.6
USP28-207ENST00000538475 IGLV4-69A0A075B6H9 119 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 TRBV6-5A0A0K0K1A5 114 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 A4D1N5 150 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 OOSP1A8MZH6 123 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 LY6LH3BQJ8 138 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 M0R1B8 84 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 VCYO14598 125 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 NBR2O15453 112 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 NXPH4O95158 308 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 GAS8-AS1O95177 125 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 LOXP28300 417 aaPredicted RBP5.07□□□□□ -1.6
USP28-207ENST00000538475 DLX1P56177 255 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 RHOHQ15669 191 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 DUX4L9Q6RFH8 374 aaPredicted RBP5.07□□□□□ -1.6
USP28-207ENST00000538475 IGFL2Q6UWQ7 119 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 COPS9Q8WXC6 57 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 LINC00477Q96M19 166 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 AMELXQ99217 191 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 ZNRD1Q9P1U0 126 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 UTRNP46939 3433 aa5.07□□□□□ -1.6
USP28-207ENST00000538475 IGHV3-21A0A0B4J1V1 117 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 TRAV17A0A0B4J275 112 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 TRAV25A0A0B4J276 109 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 SMIM9A6NGZ8 99 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 TIMM17BO60830 172 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 TRGV3P03979 118 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 CRYGDP07320 174 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 CRYGAP11844 174 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 POLR2KP53803 58 aaKnown RBP5.06□□□□□ -1.6
USP28-207ENST00000538475 C19orf54Q5BKX5 351 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 C9orf153Q5TBE3 101 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 DYNAPQ8N1N2 210 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 DYNLRB1Q9NP97 96 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 ZNF256Q9Y2P7 627 aaPredicted RBP5.06□□□□□ -1.6
USP28-207ENST00000538475 SMAD5-AS1Q9Y6J3 95 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 ZNF318Q5VUA4 2279 aa5.06□□□□□ -1.6
USP28-207ENST00000538475 TRAV21A0A0B4J279 112 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 TMEM223A0PJW6 202 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 H7C423 109 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 ATOX1O00244 68 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 LST1O00453 97 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 OVOL1O14753 267 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 NPFFO15130 113 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 BUB3O43684 328 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 COX7CP15954 63 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 Q6ZQT7 251 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 APRG1Q8IVJ8 170 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 DAND5Q8N907 189 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 Q8TAT8 98 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 METTL26Q96S19 204 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 AGPAT4-IT1Q9H0P7 198 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 PEMTQ9UBM1 199 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 C5orf42Q9H799 3197 aa5.05□□□□□ -1.6
USP28-207ENST00000538475 TRBV27A0A0K0K1C4 114 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms