RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ZNF815PA8K554 130 aa9.21□□□□□ -0.94
CPSF7-218ENST00000537641 G3V318 75 aa9.21□□□□□ -0.94
CPSF7-218ENST00000537641 COX6B1P14854 86 aa9.21□□□□□ -0.94
CPSF7-218ENST00000537641 LMO4P61968 165 aa9.21□□□□□ -0.94
CPSF7-218ENST00000537641 SMAGPQ0VAQ4 97 aa9.21□□□□□ -0.94
CPSF7-218ENST00000537641 AMTNQ6UX39 209 aa9.21□□□□□ -0.94
CPSF7-218ENST00000537641 Q6ZQT7 251 aa9.21□□□□□ -0.94
CPSF7-218ENST00000537641 C5orf56Q8N8D9 126 aa9.21□□□□□ -0.94
CPSF7-218ENST00000537641 C20orf173Q96LM9 149 aa9.21□□□□□ -0.94
CPSF7-218ENST00000537641 KLK15Q9H2R5 256 aa9.21□□□□□ -0.94
CPSF7-218ENST00000537641 CYSLTR1Q9Y271 337 aa9.21□□□□□ -0.94
CPSF7-218ENST00000537641 PHLDA3Q9Y5J5 127 aa9.21□□□□□ -0.94
CPSF7-218ENST00000537641 PRSS29PA6NIE9 313 aa9.2□□□□□ -0.94
CPSF7-218ENST00000537641 C19orf84I3L1E1 186 aa9.2□□□□□ -0.94
CPSF7-218ENST00000537641 SOCS3O14543 225 aa9.2□□□□□ -0.94
CPSF7-218ENST00000537641 NXPH4O95158 308 aa9.2□□□□□ -0.94
CPSF7-218ENST00000537641 SAA4P35542 130 aa9.2□□□□□ -0.94
CPSF7-218ENST00000537641 HERVK_113P61574 105 aa9.2□□□□□ -0.94
CPSF7-218ENST00000537641 C19orf54Q5BKX5 351 aa9.2□□□□□ -0.94
CPSF7-218ENST00000537641 RPL39LQ96EH5 51 aaKnown RBP9.2□□□□□ -0.94
CPSF7-218ENST00000537641 FAM19A4Q96LR4 140 aa9.2□□□□□ -0.94
CPSF7-218ENST00000537641 C1QTNF4Q9BXJ3 329 aa9.2□□□□□ -0.94
CPSF7-218ENST00000537641 BPESC1Q9GZL8 116 aa9.2□□□□□ -0.94
CPSF7-218ENST00000537641 PGPEP1Q9NXJ5 209 aa9.2□□□□□ -0.94
CPSF7-218ENST00000537641 AGRNO00468 2067 aa9.2□□□□□ -0.94
CPSF7-218ENST00000537641 MGPP08493 103 aa9.19□□□□□ -0.94
CPSF7-218ENST00000537641 TCTEX1D4Q5JR98 221 aa9.19□□□□□ -0.94
CPSF7-218ENST00000537641 CFAP126Q5VTH2 177 aa9.19□□□□□ -0.94
CPSF7-218ENST00000537641 MRPL16Q9NX20 251 aaKnown RBP9.19□□□□□ -0.94
CPSF7-218ENST00000537641 TRAV41A0A0B4J266 112 aa9.19□□□□□ -0.94
CPSF7-218ENST00000537641 NDUFA4O00483 81 aa9.19□□□□□ -0.94
CPSF7-218ENST00000537641 APOMO95445 188 aa9.19□□□□□ -0.94
CPSF7-218ENST00000537641 ANXA2RQ3ZCQ2 193 aa9.19□□□□□ -0.94
CPSF7-218ENST00000537641 SCGB1D4Q6XE38 83 aa9.19□□□□□ -0.94
CPSF7-218ENST00000537641 C14orf178Q8N769 122 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-218ENST00000537641 MOB4Q9Y3A3 225 aa9.19□□□□□ -0.94
CPSF7-218ENST00000537641 LINC01548A6NM66 108 aa9.18□□□□□ -0.94
CPSF7-218ENST00000537641 NPFFO15130 113 aa9.18□□□□□ -0.94
CPSF7-218ENST00000537641 ARL3P36405 182 aa9.18□□□□□ -0.94
CPSF7-218ENST00000537641 LCNL1Q6ZST4 164 aa9.18□□□□□ -0.94
CPSF7-218ENST00000537641 GPHB5Q86YW7 130 aa9.18□□□□□ -0.94
CPSF7-218ENST00000537641 IGHV4OR15-8A0A075B7B6 117 aa9.17□□□□□ -0.94
CPSF7-218ENST00000537641 A0A087WW49 117 aa9.17□□□□□ -0.94
CPSF7-218ENST00000537641 TSPAN13O95857 204 aa9.17□□□□□ -0.94
CPSF7-218ENST00000537641 UBE2D3P61077 147 aa9.17□□□□□ -0.94
CPSF7-218ENST00000537641 UBE2D2P62837 147 aa9.17□□□□□ -0.94
CPSF7-218ENST00000537641 FOXI1Q12951 378 aa9.17□□□□□ -0.94
CPSF7-218ENST00000537641 PLEKHB2Q96CS7 222 aa9.17□□□□□ -0.94
CPSF7-218ENST00000537641 TMEM141Q96I45 108 aa9.17□□□□□ -0.94
CPSF7-218ENST00000537641 BRI3O95415 125 aa9.17□□□□□ -0.94
CPSF7-218ENST00000537641 IGF1P05019 195 aa9.17□□□□□ -0.94
CPSF7-218ENST00000537641 CD7P09564 240 aa9.17□□□□□ -0.94
CPSF7-218ENST00000537641 VCX2Q9H322 139 aa9.17□□□□□ -0.94
CPSF7-218ENST00000537641 IGLV4-69A0A075B6H9 119 aa9.16□□□□□ -0.94
CPSF7-218ENST00000537641 H3BUA1 57 aa9.16□□□□□ -0.94
CPSF7-218ENST00000537641 J3KRW8 73 aa9.16□□□□□ -0.94
CPSF7-218ENST00000537641 IGHV4-39P01824 125 aa9.16□□□□□ -0.94
CPSF7-218ENST00000537641 CRYGDP07320 174 aa9.16□□□□□ -0.94
CPSF7-218ENST00000537641 RNASE3P12724 160 aaKnown RBP9.16□□□□□ -0.94
CPSF7-218ENST00000537641 SRSF9Q13242 221 aaKnown RBP eCLIP9.16□□□□□ -0.94
CPSF7-218ENST00000537641 PMVKQ15126 192 aa9.16□□□□□ -0.94
CPSF7-218ENST00000537641 MTURNQ8N3F0 131 aa9.16□□□□□ -0.94
CPSF7-218ENST00000537641 TIMM17AQ99595 171 aa9.16□□□□□ -0.94
CPSF7-218ENST00000537641 KIF25-AS1Q9Y6Z4 181 aa9.16□□□□□ -0.94
CPSF7-218ENST00000537641 A0A0J9YY99 117 aa9.15□□□□□ -0.94
CPSF7-218ENST00000537641 C11orf86A6NJI1 115 aa9.15□□□□□ -0.94
CPSF7-218ENST00000537641 DUSP14O95147 198 aaKnown RBP9.15□□□□□ -0.94
CPSF7-218ENST00000537641 SMCPP49901 116 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-218ENST00000537641 TRBV20-1A0A075B6N2 111 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 IGIPA6NJ69 53 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 RNASE4P34096 147 aaKnown RBP9.14□□□□□ -0.95
CPSF7-218ENST00000537641 INSL3P51460 131 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 POLR2KP53803 58 aaKnown RBP9.14□□□□□ -0.95
CPSF7-218ENST00000537641 CLEC2AQ6UVW9 174 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 SBSPONQ8IVN8 264 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 TP53TG1Q9Y2A0 90 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 PKD1L2Q7Z442 2459 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 TSHBP01222 138 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 PSMB2P49721 201 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 LINC00315P59091 139 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 ZFP2Q6ZN57 461 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 NDUFA11Q86Y39 141 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 PPDPFLQ8WWR9 84 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 USMG5Q96IX5 58 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 PIMREGQ9BSJ6 248 aa9.14□□□□□ -0.95
CPSF7-218ENST00000537641 CACNA1AO00555 2505 aa9.13□□□□□ -0.95
CPSF7-218ENST00000537641 ABCA2Q9BZC7 2435 aa9.13□□□□□ -0.95
CPSF7-218ENST00000537641 LOC107984156A0A0G2JMH3 177 aa9.13□□□□□ -0.95
CPSF7-218ENST00000537641 TRBV6-5A0A0K0K1A5 114 aa9.13□□□□□ -0.95
CPSF7-218ENST00000537641 VCYO14598 125 aa9.13□□□□□ -0.95
CPSF7-218ENST00000537641 UNQ9165/PRO28630Q6UXU0 137 aa9.13□□□□□ -0.95
CPSF7-218ENST00000537641 ARL17AQ8IVW1 177 aa9.13□□□□□ -0.95
CPSF7-218ENST00000537641 SYT8Q8NBV8 401 aa9.13□□□□□ -0.95
CPSF7-218ENST00000537641 MED13LQ71F56 2210 aa9.12□□□□□ -0.95
CPSF7-218ENST00000537641 KLLNB2CW77 178 aa9.12□□□□□ -0.95
CPSF7-218ENST00000537641 GNRH2O43555 120 aa9.12□□□□□ -0.95
CPSF7-218ENST00000537641 SPRY2O43597 315 aa9.12□□□□□ -0.95
CPSF7-218ENST00000537641 IGHV3-30P01768 117 aa9.12□□□□□ -0.95
CPSF7-218ENST00000537641 IGHV3-30-5P0DP03 117 aa9.12□□□□□ -0.95
CPSF7-218ENST00000537641 CKS1BP61024 79 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms