RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 MYH1P12882 1939 aa-0.16□□□□□ -2.43
CCDC7-208ENST00000537047 TRAV2A0A0B4J234 112 aa-0.16□□□□□ -2.44
CCDC7-208ENST00000537047 COX6A2Q02221 97 aa-0.16□□□□□ -2.44
CCDC7-208ENST00000537047 KRTAP6-1Q3LI64 71 aa-0.16□□□□□ -2.44
CCDC7-208ENST00000537047 HSD17B12Q53GQ0 312 aa-0.16□□□□□ -2.44
CCDC7-208ENST00000537047 TMEM35BQ8NCS4 154 aa-0.16□□□□□ -2.44
CCDC7-208ENST00000537047 FAM213BQ8TBF2 198 aa-0.16□□□□□ -2.44
CCDC7-208ENST00000537047 TAS2R8Q9NYW2 309 aa-0.16□□□□□ -2.44
CCDC7-208ENST00000537047 U3KQA8 63 aa-0.16□□□□□ -2.44
CCDC7-208ENST00000537047 CACNA1CQ13936 2221 aa-0.16□□□□□ -2.44
CCDC7-208ENST00000537047 MAP2P11137 1827 aaKnown RBP-0.16□□□□□ -2.44
CCDC7-208ENST00000537047 SPTBN4Q9H254 2564 aa-0.16□□□□□ -2.44
CCDC7-208ENST00000537047 WDR97A6NE52 1622 aa-0.16□□□□□ -2.44
CCDC7-208ENST00000537047 TRAV17A0A0B4J275 112 aa-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 CXorf51AA0A1B0GTR3 108 aa-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 SOGA1O94964 1423 aa-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 TCRAP04437 139 aa-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 FABP1P07148 127 aa-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 RPS28P62857 69 aaKnown RBP-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 EMX2Q04743 252 aa-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 SLC25A26Q70HW3 274 aa-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 BPESC1Q9GZL8 116 aa-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 STARD9Q9P2P6 4700 aa-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 SONP18583 2426 aaKnown RBP-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 DNHD1Q96M86 4753 aa-0.17□□□□□ -2.44
CCDC7-208ENST00000537047 ZNF670-ZNF695F2Z2N8 137 aa-0.18□□□□□ -2.44
CCDC7-208ENST00000537047 S100GP29377 79 aa-0.18□□□□□ -2.44
CCDC7-208ENST00000537047 AKR1D1P51857 326 aa-0.18□□□□□ -2.44
CCDC7-208ENST00000537047 ELOF1P60002 83 aaKnown RBP-0.18□□□□□ -2.44
CCDC7-208ENST00000537047 SKA2Q8WVK7 121 aaPredicted RBP-0.18□□□□□ -2.44
CCDC7-208ENST00000537047 LRP5O75197 1615 aa-0.18□□□□□ -2.44
CCDC7-208ENST00000537047 CDK13Q14004 1512 aaKnown RBP-0.18□□□□□ -2.44
CCDC7-208ENST00000537047 ANK2Q01484 3957 aa-0.19□□□□□ -2.44
CCDC7-208ENST00000537047 UNC13BO14795 1591 aa-0.19□□□□□ -2.44
CCDC7-208ENST00000537047 LAMC3Q9Y6N6 1575 aa-0.19□□□□□ -2.44
CCDC7-208ENST00000537047 RBAKDNA6NC62 111 aa-0.19□□□□□ -2.44
CCDC7-208ENST00000537047 DPM2O94777 84 aa-0.19□□□□□ -2.44
CCDC7-208ENST00000537047 NDUFA11Q86Y39 141 aa-0.19□□□□□ -2.44
CCDC7-208ENST00000537047 DDA1Q9BW61 102 aa-0.19□□□□□ -2.44
CCDC7-208ENST00000537047 SLC35B3Q9H1N7 401 aa-0.19□□□□□ -2.44
CCDC7-208ENST00000537047 NDUFAF1Q9Y375 327 aa-0.19□□□□□ -2.44
CCDC7-208ENST00000537047 ARHGAP31Q2M1Z3 1444 aa-0.2□□□□□ -2.44
CCDC7-208ENST00000537047 PIEZO1Q92508 2521 aa-0.2□□□□□ -2.44
CCDC7-208ENST00000537047 ABCA12Q86UK0 2595 aa-0.2□□□□□ -2.44
CCDC7-208ENST00000537047 PAEPP09466 180 aa-0.2□□□□□ -2.44
CCDC7-208ENST00000537047 TMEM91Q6ZNR0 172 aa-0.2□□□□□ -2.44
CCDC7-208ENST00000537047 OR8I2Q8N0Y5 310 aa-0.2□□□□□ -2.44
CCDC7-208ENST00000537047 CALML5Q9NZT1 146 aa-0.2□□□□□ -2.44
CCDC7-208ENST00000537047 CCDC171Q6TFL3 1326 aa-0.2□□□□□ -2.44
CCDC7-208ENST00000537047 FAT1Q14517 4588 aa-0.2□□□□□ -2.44
CCDC7-208ENST00000537047 OVOS2A0A0G2JMS6 1433 aa-0.21□□□□□ -2.44
CCDC7-208ENST00000537047 SPAG17Q6Q759 2223 aa-0.21□□□□□ -2.44
CCDC7-208ENST00000537047 TCRBV3S1A0A5B6 114 aa-0.21□□□□□ -2.44
CCDC7-208ENST00000537047 J3KT08 172 aa-0.21□□□□□ -2.44
CCDC7-208ENST00000537047 SMIM24O75264 130 aa-0.21□□□□□ -2.44
CCDC7-208ENST00000537047 OR8B8Q15620 311 aa-0.21□□□□□ -2.44
CCDC7-208ENST00000537047 KRTAP20-1Q3LI63 56 aa-0.21□□□□□ -2.44
CCDC7-208ENST00000537047 SMIM11BQ8TCY0 68 aa-0.21□□□□□ -2.44
CCDC7-208ENST00000537047 TNS1Q9HBL0 1735 aaKnown RBP-0.21□□□□□ -2.44
CCDC7-208ENST00000537047 CACNA1HO95180 2353 aa-0.21□□□□□ -2.44
CCDC7-208ENST00000537047 UHRF1BP1LA0JNW5 1464 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 BSNQ9UPA5 3926 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 CHD8Q9HCK8 2581 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 HELZP42694 1942 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 BIRC6Q9NR09 4857 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 GVQW2A0A096LPI5 108 aaPredicted RBP-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 A0A1B0GW64 132 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 TSTD3H0UI37 97 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 YPEL1O60688 119 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 RBP4P02753 201 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 HLA-DRB4P13762 266 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 S100A5P33763 92 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 OR2T2Q6IF00 324 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 SMIM15Q7Z3B0 74 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 ATP6V0E2Q8NHE4 81 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 DYNLRB2Q8TF09 96 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 MAGOHBQ96A72 148 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 ERG28Q9UKR5 140 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 HSPB11Q9Y547 144 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 DNAJC15Q9Y5T4 150 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 HLA-DRB4X5D2U9 266 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 PBRM1Q86U86 1689 aa-0.22□□□□□ -2.44
CCDC7-208ENST00000537047 TEP1Q99973 2627 aaKnown RBP-0.22□□□□□ -2.45
CCDC7-208ENST00000537047 STAB2Q8WWQ8 2551 aa-0.23□□□□□ -2.45
CCDC7-208ENST00000537047 TNXBP22105 4242 aa-0.23□□□□□ -2.45
CCDC7-208ENST00000537047 NMBP08949 121 aa-0.23□□□□□ -2.45
CCDC7-208ENST00000537047 SCTP09683 121 aa-0.23□□□□□ -2.45
CCDC7-208ENST00000537047 SLC25A6P12236 298 aa-0.23□□□□□ -2.45
CCDC7-208ENST00000537047 COX4I1P13073 169 aa-0.23□□□□□ -2.45
CCDC7-208ENST00000537047 SSBP1Q04837 148 aaKnown RBP-0.23□□□□□ -2.45
CCDC7-208ENST00000537047 CYP2G1PQ6ZSU1 146 aa-0.23□□□□□ -2.45
CCDC7-208ENST00000537047 SPANXCQ9NY87 97 aa-0.23□□□□□ -2.45
CCDC7-208ENST00000537047 NOP16Q9Y3C1 178 aaKnown RBP-0.23□□□□□ -2.45
CCDC7-208ENST00000537047 LRP2P98164 4655 aa-0.23□□□□□ -2.45
CCDC7-208ENST00000537047 HIVEP3Q5T1R4 2406 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 NSD1Q96L73 2696 aaPredicted RBP-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 TRAV36DV7A0A075B6V5 113 aa-0.24□□□□□ -2.45
CCDC7-208ENST00000537047 BORCS7-ASMTA0A0B4J1R7 106 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms