RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 U3KQE9 123 aa10.98□□□□□ -0.65
CDH20-202ENST00000536675 A0A0J9YY99 117 aa10.98□□□□□ -0.65
CDH20-202ENST00000536675 S100A4P26447 101 aaKnown RBP10.98□□□□□ -0.65
CDH20-202ENST00000536675 GRNP28799 593 aaKnown RBP10.98□□□□□ -0.65
CDH20-202ENST00000536675 EMP1P54849 157 aa10.98□□□□□ -0.65
CDH20-202ENST00000536675 PHLDA3Q9Y5J5 127 aa10.98□□□□□ -0.65
CDH20-202ENST00000536675 RELNP78509 3460 aa10.97□□□□□ -0.65
CDH20-202ENST00000536675 IGLV4-69A0A075B6H9 119 aa10.97□□□□□ -0.65
CDH20-202ENST00000536675 TSHBP01222 138 aa10.97□□□□□ -0.65
CDH20-202ENST00000536675 MINOS1Q5TGZ0 78 aa10.97□□□□□ -0.65
CDH20-202ENST00000536675 ZFAND2AQ8N6M9 145 aa10.97□□□□□ -0.65
CDH20-202ENST00000536675 MINOS1-NBL1R4GNA1 71 aa10.97□□□□□ -0.65
CDH20-202ENST00000536675 ZFHX3Q15911 3703 aa10.97□□□□□ -0.65
CDH20-202ENST00000536675 MUC4Q99102 2169 aa10.97□□□□□ -0.65
CDH20-202ENST00000536675 GPHB5Q86YW7 130 aa10.97□□□□□ -0.65
CDH20-202ENST00000536675 ITLN2Q8WWU7 325 aaPredicted RBP10.97□□□□□ -0.65
CDH20-202ENST00000536675 EEF1AKMT3Q96AZ1 226 aa10.97□□□□□ -0.65
CDH20-202ENST00000536675 HRNRQ86YZ3 2850 aaPredicted RBP10.97□□□□□ -0.65
CDH20-202ENST00000536675 Q6ZS46 218 aa10.96□□□□□ -0.65
CDH20-202ENST00000536675 CFC1BP0CG36 223 aa10.96□□□□□ -0.66
CDH20-202ENST00000536675 CFC1P0CG37 223 aa10.96□□□□□ -0.66
CDH20-202ENST00000536675 ASIPP42127 132 aa10.96□□□□□ -0.66
CDH20-202ENST00000536675 DEFB1P60022 68 aa10.96□□□□□ -0.66
CDH20-202ENST00000536675 LYRM7Q5U5X0 104 aa10.96□□□□□ -0.66
CDH20-202ENST00000536675 LENEPQ9Y5L5 61 aa10.96□□□□□ -0.66
CDH20-202ENST00000536675 TGFAP01135 160 aa10.95□□□□□ -0.66
CDH20-202ENST00000536675 ANXA2RQ3ZCQ2 193 aa10.95□□□□□ -0.66
CDH20-202ENST00000536675 C1orf122Q6ZSJ8 110 aa10.95□□□□□ -0.66
CDH20-202ENST00000536675 SBSPONQ8IVN8 264 aa10.95□□□□□ -0.66
CDH20-202ENST00000536675 DEFB104AQ8WTQ1 72 aa10.95□□□□□ -0.66
CDH20-202ENST00000536675 TRAV21A0A0B4J279 112 aa10.95□□□□□ -0.66
CDH20-202ENST00000536675 IGHV3-30P01768 117 aa10.95□□□□□ -0.66
CDH20-202ENST00000536675 IGHV3-30-5P0DP03 117 aa10.95□□□□□ -0.66
CDH20-202ENST00000536675 ZFP36P26651 326 aaKnown RBP10.95□□□□□ -0.66
CDH20-202ENST00000536675 TSPEAR-AS2P59090 65 aa10.95□□□□□ -0.66
CDH20-202ENST00000536675 TRBV7-1A0A0A6YYK4 115 aa10.94□□□□□ -0.66
CDH20-202ENST00000536675 A8MWV9 139 aa10.94□□□□□ -0.66
CDH20-202ENST00000536675 GNRH2O43555 120 aa10.94□□□□□ -0.66
CDH20-202ENST00000536675 C9orf139Q6ZV77 190 aa10.94□□□□□ -0.66
CDH20-202ENST00000536675 LINC00477Q96M19 166 aa10.94□□□□□ -0.66
CDH20-202ENST00000536675 TP53TG1Q9Y2A0 90 aa10.94□□□□□ -0.66
CDH20-202ENST00000536675 TRBV20-1A0A075B6N2 111 aa10.94□□□□□ -0.66
CDH20-202ENST00000536675 FAM90A27PA6NNH2 459 aa10.94□□□□□ -0.66
CDH20-202ENST00000536675 HERVK_113P61574 105 aa10.94□□□□□ -0.66
CDH20-202ENST00000536675 KIR2DL4Q99706 377 aa10.94□□□□□ -0.66
CDH20-202ENST00000536675 IGIPA6NJ69 53 aa10.93□□□□□ -0.66
CDH20-202ENST00000536675 ZNF688P0C7X2 276 aa10.93□□□□□ -0.66
CDH20-202ENST00000536675 ANKRD29Q8N6D5 301 aa10.93□□□□□ -0.66
CDH20-202ENST00000536675 RNF183Q96D59 192 aa10.93□□□□□ -0.66
CDH20-202ENST00000536675 AJUBAQ96IF1 538 aa10.93□□□□□ -0.66
CDH20-202ENST00000536675 RNASE4P34096 147 aaKnown RBP10.93□□□□□ -0.66
CDH20-202ENST00000536675 ERG28Q9UKR5 140 aa10.93□□□□□ -0.66
CDH20-202ENST00000536675 C10orf126Q8N4M7 172 aa10.92□□□□□ -0.66
CDH20-202ENST00000536675 SLC25A29Q8N8R3 303 aa10.92□□□□□ -0.66
CDH20-202ENST00000536675 OR10J6PQ8NGY7 276 aa10.92□□□□□ -0.66
CDH20-202ENST00000536675 VCX2Q9H322 139 aa10.92□□□□□ -0.66
CDH20-202ENST00000536675 PPP1R17O96001 155 aa10.92□□□□□ -0.66
CDH20-202ENST00000536675 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
CDH20-202ENST00000536675 GATA3P23771 443 aa10.92□□□□□ -0.66
CDH20-202ENST00000536675 RPL39P62891 51 aaKnown RBP10.92□□□□□ -0.66
CDH20-202ENST00000536675 PMVKQ15126 192 aa10.92□□□□□ -0.66
CDH20-202ENST00000536675 PAPPA-AS1Q5QFB9 102 aa10.92□□□□□ -0.66
CDH20-202ENST00000536675 SPTBN2O15020 2390 aa10.92□□□□□ -0.66
CDH20-202ENST00000536675 ZNF292O60281 2723 aa10.92□□□□□ -0.66
CDH20-202ENST00000536675 IGHV1-69DA0A0B4J2H0 117 aa10.91□□□□□ -0.66
CDH20-202ENST00000536675 SCGB1C2P0DMR2 95 aa10.91□□□□□ -0.66
CDH20-202ENST00000536675 SIRPDQ9H106 197 aa10.91□□□□□ -0.66
CDH20-202ENST00000536675 ARL3P36405 182 aa10.91□□□□□ -0.66
CDH20-202ENST00000536675 POM121L12Q8N7R1 296 aa10.91□□□□□ -0.66
CDH20-202ENST00000536675 PRO1854Q9UHT4 67 aa10.91□□□□□ -0.66
CDH20-202ENST00000536675 MED14OSP0DP75 135 aa10.91□□□□□ -0.66
CDH20-202ENST00000536675 LINC00315P59091 139 aa10.91□□□□□ -0.66
CDH20-202ENST00000536675 AMELXQ99217 191 aa10.91□□□□□ -0.66
CDH20-202ENST00000536675 TMEM170BQ5T4T1 132 aa10.9□□□□□ -0.66
CDH20-202ENST00000536675 ZNRF2Q8NHG8 242 aa10.9□□□□□ -0.66
CDH20-202ENST00000536675 KIF25-AS1Q9Y6Z4 181 aa10.9□□□□□ -0.66
CDH20-202ENST00000536675 OVOL1O14753 267 aa10.9□□□□□ -0.67
CDH20-202ENST00000536675 F6UB75 175 aa10.89□□□□□ -0.67
CDH20-202ENST00000536675 SOCS3O14543 225 aa10.89□□□□□ -0.67
CDH20-202ENST00000536675 FAM19A4Q96LR4 140 aa10.89□□□□□ -0.67
CDH20-202ENST00000536675 POLR2KP53803 58 aaKnown RBP10.89□□□□□ -0.67
CDH20-202ENST00000536675 UNQ9165/PRO28630Q6UXU0 137 aa10.89□□□□□ -0.67
CDH20-202ENST00000536675 TLN1Q9Y490 2541 aaKnown RBP10.89□□□□□ -0.67
CDH20-202ENST00000536675 IGHV4OR15-8A0A075B7B6 117 aa10.88□□□□□ -0.67
CDH20-202ENST00000536675 A0A087WW49 117 aa10.88□□□□□ -0.67
CDH20-202ENST00000536675 EIF4EBP3O60516 100 aaPredicted RBP10.88□□□□□ -0.67
CDH20-202ENST00000536675 CRIP2P52943 208 aaPredicted RBP10.88□□□□□ -0.67
CDH20-202ENST00000536675 RAX2Q96IS3 184 aa10.88□□□□□ -0.67
CDH20-202ENST00000536675 JPT2Q9H910 190 aa10.88□□□□□ -0.67
CDH20-202ENST00000536675 TTC28Q96AY4 2481 aa10.88□□□□□ -0.67
CDH20-202ENST00000536675 SAA4P35542 130 aa10.88□□□□□ -0.67
CDH20-202ENST00000536675 RPL32P62910 135 aaKnown RBP10.88□□□□□ -0.67
CDH20-202ENST00000536675 C11orf71Q6IPW1 123 aa10.88□□□□□ -0.67
CDH20-202ENST00000536675 TMEM141Q96I45 108 aa10.88□□□□□ -0.67
CDH20-202ENST00000536675 ANAPC13Q9BS18 74 aa10.88□□□□□ -0.67
CDH20-202ENST00000536675 J3QQQ9 107 aa10.87□□□□□ -0.67
CDH20-202ENST00000536675 SLC25A20O43772 301 aa10.87□□□□□ -0.67
CDH20-202ENST00000536675 NXPH4O95158 308 aa10.87□□□□□ -0.67
CDH20-202ENST00000536675 SUMO4Q6EEV6 95 aa10.87□□□□□ -0.67
CDH20-202ENST00000536675 TRPT1Q86TN4 253 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 288.2 ms