RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 COX7A1P24310 79 aa6□□□□□ -1.45
CPSF7-216ENST00000536548 KLRD1Q13241 179 aa6□□□□□ -1.45
CPSF7-216ENST00000536548 ORMDL2Q53FV1 153 aa6□□□□□ -1.45
CPSF7-216ENST00000536548 CCDC144NLQ6NUI1 221 aa6□□□□□ -1.45
CPSF7-216ENST00000536548 C22orf34Q6ZV56 151 aa6□□□□□ -1.45
CPSF7-216ENST00000536548 DTX2Q86UW9 622 aa6□□□□□ -1.45
CPSF7-216ENST00000536548 DLX4Q92988 240 aaPredicted RBP6□□□□□ -1.45
CPSF7-216ENST00000536548 MRPL53Q96EL3 112 aaKnown RBP6□□□□□ -1.45
CPSF7-216ENST00000536548 C1QTNF4Q9BXJ3 329 aa6□□□□□ -1.45
CPSF7-216ENST00000536548 MRPL16Q9NX20 251 aaKnown RBP6□□□□□ -1.45
CPSF7-216ENST00000536548 MRPL35Q9NZE8 188 aaKnown RBP6□□□□□ -1.45
CPSF7-216ENST00000536548 IGLV2-18A0A075B6J9 118 aa5.99□□□□□ -1.45
CPSF7-216ENST00000536548 IGHV4-4A0A075B6R2 117 aa5.99□□□□□ -1.45
CPSF7-216ENST00000536548 IGHV4-30-2A0A087WSY4 118 aa5.99□□□□□ -1.45
CPSF7-216ENST00000536548 A0A096LNT2 108 aa5.99□□□□□ -1.45
CPSF7-216ENST00000536548 APOMO95445 188 aa5.99□□□□□ -1.45
CPSF7-216ENST00000536548 ZNF80P51504 273 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-216ENST00000536548 BSPH1Q075Z2 132 aa5.99□□□□□ -1.45
CPSF7-216ENST00000536548 ETDBQ3ZM63 59 aa5.99□□□□□ -1.45
CPSF7-216ENST00000536548 PRO0461Q9UI25 63 aa5.99□□□□□ -1.45
CPSF7-216ENST00000536548 SELENOKQ9Y6D0 94 aa5.99□□□□□ -1.45
CPSF7-216ENST00000536548 B9A039 149 aa5.98□□□□□ -1.45
CPSF7-216ENST00000536548 TIMM23O14925 209 aa5.98□□□□□ -1.45
CPSF7-216ENST00000536548 PPP1R17O96001 155 aa5.98□□□□□ -1.45
CPSF7-216ENST00000536548 IGHV4-39P01824 125 aa5.98□□□□□ -1.45
CPSF7-216ENST00000536548 C5orf64Q2M2E5 130 aa5.98□□□□□ -1.45
CPSF7-216ENST00000536548 ZNF672Q499Z4 452 aaPredicted RBP5.98□□□□□ -1.45
CPSF7-216ENST00000536548 PAPPA-AS1Q5QFB9 102 aa5.98□□□□□ -1.45
CPSF7-216ENST00000536548 MAPKAPK5-AS1Q8N8E1 139 aa5.98□□□□□ -1.45
CPSF7-216ENST00000536548 Q8TAT8 98 aa5.98□□□□□ -1.45
CPSF7-216ENST00000536548 ZNF418Q8TF45 676 aaPredicted RBP5.98□□□□□ -1.45
CPSF7-216ENST00000536548 TTTY13Q9BZ97 58 aa5.98□□□□□ -1.45
CPSF7-216ENST00000536548 MSRB1Q9NZV6 116 aa5.98□□□□□ -1.45
CPSF7-216ENST00000536548 DPM3Q9P2X0 92 aa5.98□□□□□ -1.45
CPSF7-216ENST00000536548 PRR14LQ5THK1 2151 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 DSCAML1Q8TD84 2053 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 TRBV20-1A0A075B6N2 111 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 OOSP1A8MZH6 123 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 CRYBA4P53673 196 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 HERVK_113P61574 105 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 FOXI1Q12951 378 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 TMEM78Q5T7P6 136 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 C8orf86Q6ZUL3 223 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 SH2D6Q7Z4S9 175 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 NRACQ8N912 160 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 PPDPFLQ8WWR9 84 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 FANCD2OSQ96PS1 177 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 SCGB3A1Q96QR1 104 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 C20orf78Q9BR46 151 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 SMIM2Q9BVW6 85 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 GEMIN7Q9H840 131 aaKnown RBP5.97□□□□□ -1.45
CPSF7-216ENST00000536548 BIRC6Q9NR09 4857 aa5.97□□□□□ -1.45
CPSF7-216ENST00000536548 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.96□□□□□ -1.46
CPSF7-216ENST00000536548 TMEM262E9PQX1 116 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 M0R381 172 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 IGHV4-31P0DP07 118 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 SPANXN1Q5VSR9 72 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 CFAP126Q5VTH2 177 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 DYNAPQ8N1N2 210 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 CFHR4Q92496 578 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 TOMM6Q96B49 74 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 PGPEP1Q9NXJ5 209 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 ONECUT1Q9UBC0 465 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 UFC1Q9Y3C8 167 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 LENEPQ9Y5L5 61 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 SMAD5-AS1Q9Y6J3 95 aa5.96□□□□□ -1.46
CPSF7-216ENST00000536548 F8W735 103 aaPredicted RBP5.95□□□□□ -1.46
CPSF7-216ENST00000536548 M0R1W7 72 aa5.95□□□□□ -1.46
CPSF7-216ENST00000536548 IGHG4P01861 327 aa5.95□□□□□ -1.46
CPSF7-216ENST00000536548 CLEC3BP05452 202 aa5.95□□□□□ -1.46
CPSF7-216ENST00000536548 LGALS1P09382 135 aaKnown RBP5.95□□□□□ -1.46
CPSF7-216ENST00000536548 SPINK8P0C7L1 97 aa5.95□□□□□ -1.46
CPSF7-216ENST00000536548 MED14OSP0DP75 135 aa5.95□□□□□ -1.46
CPSF7-216ENST00000536548 GATA1P15976 413 aaPredicted RBP5.95□□□□□ -1.46
CPSF7-216ENST00000536548 ERCC8Q13216 396 aa5.95□□□□□ -1.46
CPSF7-216ENST00000536548 HES1Q14469 280 aa5.95□□□□□ -1.46
CPSF7-216ENST00000536548 MORN3Q6PF18 240 aaPredicted RBP5.95□□□□□ -1.46
CPSF7-216ENST00000536548 AMTNQ6UX39 209 aa5.95□□□□□ -1.46
CPSF7-216ENST00000536548 SYT8Q8NBV8 401 aa5.95□□□□□ -1.46
CPSF7-216ENST00000536548 NEXN-AS1Q8NBZ9 246 aa5.95□□□□□ -1.46
CPSF7-216ENST00000536548 LY6G5BQ8NDX9 201 aa5.95□□□□□ -1.46
CPSF7-216ENST00000536548 IGHV1-69DA0A0B4J2H0 117 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 IGKV3D-20A0A0C4DH25 116 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 ZNF815PA8K554 130 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 E7EQL1 145 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 M0QXV9 152 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 GAS8-AS1O95177 125 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 CD3EP07766 207 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 CTSGP08311 255 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 PSMB2P49721 201 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 UBE2D1P51668 147 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 SRSF9Q13242 221 aaKnown RBP eCLIP5.94□□□□□ -1.46
CPSF7-216ENST00000536548 KLK9Q2XQG4 91 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 SCGB1D4Q6XE38 83 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 TEN1Q86WV5 123 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 FAM110DQ8TAY7 271 aaPredicted RBP5.94□□□□□ -1.46
CPSF7-216ENST00000536548 PRADC1Q9BSG0 188 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 DPH3P1Q9H4G8 78 aa5.94□□□□□ -1.46
CPSF7-216ENST00000536548 KLK9Q9UKQ9 250 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 1433.7 ms