RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 BGLAPP02818 100 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 IGHV4-34P06331 123 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 CD70P32970 193 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 NCBP2P52298 156 aaKnown RBP eCLIP3.15□□□□□ -1.912e-8■■■■■ 39
ITGB1-219ENST00000534049 ERVK-16P61578 105 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 NUMA1Q14980 2115 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 TMEM52BQ4KMG9 183 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 TMEM155Q4W5P6 130 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 CENPWQ5EE01 88 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 FAM104BQ5XKR9 115 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 SDIM1Q6ZPB5 146 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 LINC00305Q7Z4B0 112 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 NDUFA11Q86Y39 141 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 PCP2Q8IVA1 136 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 Q8N377 158 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 C3orf56Q8N813 242 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 CNRIP1Q96F85 164 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-219ENST00000534049 UPK3BQ9BT76 320 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 NPCDR1Q9BY65 106 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 PLEKHA3Q9HB20 300 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 CALYQ9NYX4 217 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 TP73-AS1Q9UF72 201 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 Q9UF83 564 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 KLK5Q9Y337 293 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-219ENST00000534049 PCNX3Q9H6A9 2034 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 PTPRQQ9UMZ3 2332 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 MYOFQ9NZM1 2061 aa3.15□□□□□ -1.91
ITGB1-219ENST00000534049 COL5A1P20908 1838 aaPredicted RBP3.14□□□□□ -1.91
ITGB1-219ENST00000534049 RELNP78509 3460 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 IGLV3-10A0A075B6K4 115 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 A0A0A6YYD4 124 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 C19orf71A6NCJ1 209 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 SCRG1O75711 98 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 IGHV3-13P01766 116 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 HMGN2P05204 90 aaKnown RBP3.14□□□□□ -1.91
ITGB1-219ENST00000534049 SYNJ2BPP57105 145 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 CACNG7P62955 275 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 PAX8Q06710 450 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 LINC00173Q6ZV60 143 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 LINC01561Q8N1V8 128 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 Q8NBF4 154 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 NT5CQ8TCD5 201 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 DSCR8Q96T75 97 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 C16orf95Q9H693 158 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 PRR34Q9NV39 138 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 WDR83OSQ9Y284 106 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 LHFPL6Q9Y693 200 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 THADAQ6YHU6 1953 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 SETXQ7Z333 2677 aaKnown RBP3.14□□□□□ -1.91
ITGB1-219ENST00000534049 HEATR5AQ86XA9 2040 aa3.14□□□□□ -1.91
ITGB1-219ENST00000534049 COL27A1Q8IZC6 1860 aaPredicted RBP3.13□□□□□ -1.91
ITGB1-219ENST00000534049 MAST4O15021 2626 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 FLNBO75369 2602 aaKnown RBP3.13□□□□□ -1.91
ITGB1-219ENST00000534049 IGLV3-16A0A075B6K0 115 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 LINC01549A6NIU2 74 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 PEX7O00628 323 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 NDUFS5O43920 106 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 LGALS3P17931 250 aaKnown RBP3.13□□□□□ -1.91
ITGB1-219ENST00000534049 PLNP26678 52 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 EFNA4P52798 201 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 SUB1P53999 127 aaKnown RBP eCLIP3.13□□□□□ -1.91
ITGB1-219ENST00000534049 DAZ2Q13117 558 aaKnown RBP3.13□□□□□ -1.91
ITGB1-219ENST00000534049 ERCC8Q13216 396 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 HIGD2BQ4VC39 106 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 IGFL2Q6UWQ7 119 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 DAZ4Q86SG3 579 aaKnown RBP3.13□□□□□ -1.91
ITGB1-219ENST00000534049 C10orf105Q8TEF2 133 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 SRSF12Q8WXF0 261 aaKnown RBP3.13□□□□□ -1.91
ITGB1-219ENST00000534049 VSIG2Q96IQ7 327 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 IGF2BP2-AS1Q96M15 143 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 C1orf147Q96MC9 270 aaPredicted RBP3.13□□□□□ -1.91
ITGB1-219ENST00000534049 DAZ3Q9NR90 486 aaKnown RBP3.13□□□□□ -1.91
ITGB1-219ENST00000534049 ZNF492Q9P255 531 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 HHLA3Q9XRX5 114 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 SLC25A15Q9Y619 301 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 RALGAPA1Q6GYQ0 2036 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 TENM4Q6N022 2769 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 PLXNA2O75051 1894 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 NINQ8N4C6 2090 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 PI4KAP42356 2102 aa3.13□□□□□ -1.91
ITGB1-219ENST00000534049 KNL1Q8NG31 2342 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-219ENST00000534049 A0A1W2PPR1 153 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 LINC01546A6NGU7 62 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 HIGD1CA8MV81 97 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 SPINK4O60575 86 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 IGLV2-8P01709 118 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 TCRAP04437 139 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 COX6CP09669 75 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 ARL14EPLP0DKL9 152 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 SLC25A16P16260 332 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 CCL1P22362 96 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 FCER1GP30273 86 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 IFI27P40305 119 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-219ENST00000534049 FXYD4P59646 89 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 ZNF816Q0VGE8 651 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-219ENST00000534049 SPANXN5Q5MJ07 72 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 GDF5OSQ5U4N7 250 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 SCGB1D4Q6XE38 83 aa3.12□□□□□ -1.91
ITGB1-219ENST00000534049 ZFP2Q6ZN57 461 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms