RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 COX6B1P14854 86 aa12.54□□□□□ -0.4
CTSB-228ENST00000533455 SIGMAR1Q99720 223 aa12.54□□□□□ -0.4
CTSB-228ENST00000533455 SPATA25Q9BR10 227 aa12.54□□□□□ -0.4
CTSB-228ENST00000533455 TSSC4Q9Y5U2 329 aaPredicted RBP12.54□□□□□ -0.4
CTSB-228ENST00000533455 LINC01549A6NIU2 74 aa12.54□□□□□ -0.4
CTSB-228ENST00000533455 TRBV12-3P01733 135 aa12.54□□□□□ -0.4
CTSB-228ENST00000533455 AMTNQ6UX39 209 aa12.54□□□□□ -0.4
CTSB-228ENST00000533455 RELNP78509 3460 aa12.53□□□□□ -0.4
CTSB-228ENST00000533455 TMEM238LA0A1B0GVL6 79 aa12.53□□□□□ -0.4
CTSB-228ENST00000533455 GAGE12HA6NDE8 117 aa12.53□□□□□ -0.4
CTSB-228ENST00000533455 A6NJY4 79 aa12.53□□□□□ -0.4
CTSB-228ENST00000533455 RNASE4P34096 147 aaKnown RBP12.53□□□□□ -0.4
CTSB-228ENST00000533455 ETDBQ3ZM63 59 aa12.53□□□□□ -0.4
CTSB-228ENST00000533455 SPAG8Q99932 426 aaPredicted RBP12.53□□□□□ -0.4
CTSB-228ENST00000533455 UBTD1Q9HAC8 227 aa12.53□□□□□ -0.4
CTSB-228ENST00000533455 LINC00527Q9UJ94 153 aa12.53□□□□□ -0.4
CTSB-228ENST00000533455 KIF25-AS1Q9Y6Z4 181 aa12.53□□□□□ -0.4
CTSB-228ENST00000533455 ZNF815PA8K554 130 aa12.52□□□□□ -0.4
CTSB-228ENST00000533455 H3BUA1 57 aa12.52□□□□□ -0.4
CTSB-228ENST00000533455 AZU1P20160 251 aa12.52□□□□□ -0.4
CTSB-228ENST00000533455 SH2D6Q7Z4S9 175 aa12.52□□□□□ -0.4
CTSB-228ENST00000533455 IGHV4OR15-8A0A075B7B6 117 aa12.52□□□□□ -0.41
CTSB-228ENST00000533455 A0A087WW49 117 aa12.52□□□□□ -0.41
CTSB-228ENST00000533455 GNRH2O43555 120 aa12.52□□□□□ -0.41
CTSB-228ENST00000533455 UBE2D1P51668 147 aa12.52□□□□□ -0.41
CTSB-228ENST00000533455 LINC00315P59091 139 aa12.52□□□□□ -0.41
CTSB-228ENST00000533455 DEFB1P60022 68 aa12.52□□□□□ -0.41
CTSB-228ENST00000533455 CACNA1BQ00975 2339 aa12.52□□□□□ -0.41
CTSB-228ENST00000533455 MED13LQ71F56 2210 aa12.51□□□□□ -0.41
CTSB-228ENST00000533455 CRYGDP07320 174 aa12.51□□□□□ -0.41
CTSB-228ENST00000533455 UCNP55089 124 aa12.51□□□□□ -0.41
CTSB-228ENST00000533455 SCGB2A2Q13296 93 aa12.51□□□□□ -0.41
CTSB-228ENST00000533455 PAPPA-AS1Q5QFB9 102 aa12.51□□□□□ -0.41
CTSB-228ENST00000533455 USMG5Q96IX5 58 aa12.51□□□□□ -0.41
CTSB-228ENST00000533455 PGPEP1Q9NXJ5 209 aa12.51□□□□□ -0.41
CTSB-228ENST00000533455 PIEZO1Q92508 2521 aa12.51□□□□□ -0.41
CTSB-228ENST00000533455 DUSP14O95147 198 aaKnown RBP12.5□□□□□ -0.41
CTSB-228ENST00000533455 PLEKHB2Q96CS7 222 aa12.5□□□□□ -0.41
CTSB-228ENST00000533455 GTSF1LQ9H1H1 148 aa12.5□□□□□ -0.41
CTSB-228ENST00000533455 MUC4Q99102 2169 aa12.5□□□□□ -0.41
CTSB-228ENST00000533455 IGLV4-69A0A075B6H9 119 aa12.5□□□□□ -0.41
CTSB-228ENST00000533455 IGIPA6NJ69 53 aa12.49□□□□□ -0.41
CTSB-228ENST00000533455 F6UB75 175 aa12.49□□□□□ -0.41
CTSB-228ENST00000533455 TSHBP01222 138 aa12.49□□□□□ -0.41
CTSB-228ENST00000533455 IGHV1-69P01742 117 aa12.49□□□□□ -0.41
CTSB-228ENST00000533455 SPTA1P02549 2419 aa12.49□□□□□ -0.41
CTSB-228ENST00000533455 KLLNB2CW77 178 aa12.49□□□□□ -0.41
CTSB-228ENST00000533455 POLR2KP53803 58 aaKnown RBP12.49□□□□□ -0.41
CTSB-228ENST00000533455 SCGB1D4Q6XE38 83 aa12.49□□□□□ -0.41
CTSB-228ENST00000533455 ATP6V0E2Q8NHE4 81 aa12.49□□□□□ -0.41
CTSB-228ENST00000533455 C11orf86A6NJI1 115 aa12.48□□□□□ -0.41
CTSB-228ENST00000533455 HERVK_113P61574 105 aa12.48□□□□□ -0.41
CTSB-228ENST00000533455 ZFP2Q6ZN57 461 aa12.48□□□□□ -0.41
CTSB-228ENST00000533455 DLX4Q92988 240 aaPredicted RBP12.48□□□□□ -0.41
CTSB-228ENST00000533455 TMEM141Q96I45 108 aa12.48□□□□□ -0.41
CTSB-228ENST00000533455 MRPL16Q9NX20 251 aaKnown RBP12.48□□□□□ -0.41
CTSB-228ENST00000533455 ATRXP46100 2492 aa12.47□□□□□ -0.41
CTSB-228ENST00000533455 IGHG2P01859 326 aa12.47□□□□□ -0.41
CTSB-228ENST00000533455 PMVKQ15126 192 aa12.47□□□□□ -0.41
CTSB-228ENST00000533455 CFAP126Q5VTH2 177 aa12.47□□□□□ -0.41
CTSB-228ENST00000533455 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
CTSB-228ENST00000533455 IGHV3OR16-10A0A075B7F0 116 aa12.47□□□□□ -0.41
CTSB-228ENST00000533455 CD7P09564 240 aa12.47□□□□□ -0.41
CTSB-228ENST00000533455 MTURNQ8N3F0 131 aa12.47□□□□□ -0.41
CTSB-228ENST00000533455 TIMM17AQ99595 171 aa12.47□□□□□ -0.41
CTSB-228ENST00000533455 TSPAN13O95857 204 aa12.46□□□□□ -0.41
CTSB-228ENST00000533455 RPL11P62913 178 aaKnown RBP12.46□□□□□ -0.41
CTSB-228ENST00000533455 SMAGPQ0VAQ4 97 aa12.46□□□□□ -0.41
CTSB-228ENST00000533455 SRSF9Q13242 221 aaKnown RBP eCLIP12.46□□□□□ -0.41
CTSB-228ENST00000533455 SUMO4Q6EEV6 95 aa12.46□□□□□ -0.41
CTSB-228ENST00000533455 RHPN1-AS1Q9BWJ2 59 aa12.46□□□□□ -0.41
CTSB-228ENST00000533455 A0A0J9YY99 117 aa12.45□□□□□ -0.42
CTSB-228ENST00000533455 NDUFS8O00217 210 aa12.45□□□□□ -0.42
CTSB-228ENST00000533455 IGHV3-11P01762 117 aa12.45□□□□□ -0.42
CTSB-228ENST00000533455 UBE2D3P61077 147 aa12.45□□□□□ -0.42
CTSB-228ENST00000533455 UBE2D2P62837 147 aa12.45□□□□□ -0.42
CTSB-228ENST00000533455 VCYO14598 125 aa12.45□□□□□ -0.42
CTSB-228ENST00000533455 CIDEAO60543 219 aa12.45□□□□□ -0.42
CTSB-228ENST00000533455 KLHL30-AS1Q8NEE0 82 aa12.45□□□□□ -0.42
CTSB-228ENST00000533455 C1QTNF4Q9BXJ3 329 aa12.45□□□□□ -0.42
CTSB-228ENST00000533455 APOMO95445 188 aa12.44□□□□□ -0.42
CTSB-228ENST00000533455 SMCPP49901 116 aaPredicted RBP12.44□□□□□ -0.42
CTSB-228ENST00000533455 INSL3P51460 131 aa12.44□□□□□ -0.42
CTSB-228ENST00000533455 LYRM7Q5U5X0 104 aa12.44□□□□□ -0.42
CTSB-228ENST00000533455 BRD3OSQ6XYD6 125 aa12.44□□□□□ -0.42
CTSB-228ENST00000533455 LCNL1Q6ZST4 164 aa12.44□□□□□ -0.42
CTSB-228ENST00000533455 ABCA2Q9BZC7 2435 aa12.44□□□□□ -0.42
CTSB-228ENST00000533455 TRBV6-5A0A0K0K1A5 114 aa12.44□□□□□ -0.42
CTSB-228ENST00000533455 FAM159AQ6UWV7 190 aa12.44□□□□□ -0.42
CTSB-228ENST00000533455 KIR2DL4Q99706 377 aa12.44□□□□□ -0.42
CTSB-228ENST00000533455 DAZ1Q9NQZ3 744 aaKnown RBP12.44□□□□□ -0.42
CTSB-228ENST00000533455 ITPR1Q14643 2758 aa12.43□□□□□ -0.42
CTSB-228ENST00000533455 A6NDX4 124 aa12.43□□□□□ -0.42
CTSB-228ENST00000533455 LGALS9O00182 355 aa12.43□□□□□ -0.42
CTSB-228ENST00000533455 FOXI1Q12951 378 aa12.43□□□□□ -0.42
CTSB-228ENST00000533455 TRBV27A0A0K0K1C4 114 aa12.42□□□□□ -0.42
CTSB-228ENST00000533455 PF4V1P10720 104 aa12.42□□□□□ -0.42
CTSB-228ENST00000533455 NDUFA11Q86Y39 141 aa12.42□□□□□ -0.42
CTSB-228ENST00000533455 JPT2Q9H910 190 aa12.42□□□□□ -0.42
CTSB-228ENST00000533455 IGLV1-40P01703 118 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms