RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 COX6B1P14854 86 aa0.98□□□□□ -2.25
CD44-234ENST00000531873 TFAMQ00059 246 aaKnown RBP0.98□□□□□ -2.25
CD44-234ENST00000531873 MYL5Q02045 173 aa0.98□□□□□ -2.25
CD44-234ENST00000531873 C1orf134Q5TEV5 83 aa0.98□□□□□ -2.25
CD44-234ENST00000531873 Q6ZSA8 131 aa0.98□□□□□ -2.25
CD44-234ENST00000531873 PRR15Q8IV56 129 aa0.98□□□□□ -2.25
CD44-234ENST00000531873 DDA1Q9BW61 102 aa0.98□□□□□ -2.25
CD44-234ENST00000531873 CACYBPQ9HB71 228 aaKnown RBP0.98□□□□□ -2.25
CD44-234ENST00000531873 LRTM1Q9HBL6 345 aa0.98□□□□□ -2.25
CD44-234ENST00000531873 NUBP2Q9Y5Y2 271 aa0.98□□□□□ -2.25
CD44-234ENST00000531873 LY96Q9Y6Y9 160 aa0.98□□□□□ -2.25
CD44-234ENST00000531873 ATMQ13315 3056 aa0.98□□□□□ -2.25
CD44-234ENST00000531873 SONP18583 2426 aaKnown RBP0.98□□□□□ -2.25
CD44-234ENST00000531873 AKAP12Q02952 1782 aa0.98□□□□□ -2.25
CD44-234ENST00000531873 ROS1P08922 2347 aa0.98□□□□□ -2.25
CD44-234ENST00000531873 APC2O95996 2303 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 ACACAQ13085 2346 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 LOC110117498A0A087WWA1 95 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 TRAV5A0A0B4J249 113 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 TCRBV4S1A1TA0A5B7 111 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 IGKV2-29A2NJV5 120 aaPredicted RBP0.97□□□□□ -2.25
CD44-234ENST00000531873 E7EUB6 86 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 LYNX1P0DP58 116 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 DSCR4P56555 118 aaPredicted RBP0.97□□□□□ -2.25
CD44-234ENST00000531873 HBBP68871 147 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 DR1Q01658 176 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 PLCXD2Q0VAA5 305 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 KRTAP26-1Q6PEX3 210 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 TEX261Q6UWH6 196 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 SMIM15Q7Z3B0 74 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 Q8N814 137 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 ST6GALNAC3Q8NDV1 305 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 OR4K15Q8NH41 348 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 POP5Q969H6 163 aaKnown RBP0.97□□□□□ -2.25
CD44-234ENST00000531873 CHCHD1Q96BP2 118 aaKnown RBP0.97□□□□□ -2.25
CD44-234ENST00000531873 ZNF714Q96N38 554 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 MRPL40Q9NQ50 206 aaKnown RBP0.97□□□□□ -2.25
CD44-234ENST00000531873 U3KQ87 197 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 CEP152O94986 1710 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 MUC4Q99102 2169 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 C5P01031 1676 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 QRICH2Q9H0J4 1663 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 MYOM3Q5VTT5 1437 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 KMT2CQ8NEZ4 4911 aaKnown RBP0.97□□□□□ -2.25
CD44-234ENST00000531873 MGAMO43451 1857 aa0.97□□□□□ -2.25
CD44-234ENST00000531873 RTL9Q8NET4 1388 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 KDM3BQ7LBC6 1761 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 EML5Q05BV3 1969 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 DDX60LQ5H9U9 1706 aaKnown RBP0.96□□□□□ -2.26
CD44-234ENST00000531873 IGKV3-7A0A075B6H7 116 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 ZNF736B4DX44 427 aaPredicted RBP0.96□□□□□ -2.26
CD44-234ENST00000531873 RER1O15258 196 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 HIST1H2BKO60814 126 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 HIST1H2BJP06899 126 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 OR10J4P0C629 311 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 OR5D16Q8NGK9 328 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 TMEM254Q8TBM7 123 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 C10orf105Q8TEF2 133 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 BORCS8Q96FH0 119 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 SMR3AQ99954 134 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 TAF9BQ9HBM6 251 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 LAMTOR3Q9UHA4 124 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 NAT8BQ9UHF3 227 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 KLK9Q9UKQ9 250 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 NDUFAF1Q9Y375 327 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 SNURFQ9Y675 71 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 ZNF831Q5JPB2 1677 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 FER1L6Q2WGJ9 1857 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 LTN1O94822 1766 aa0.96□□□□□ -2.26
CD44-234ENST00000531873 MGAQ8IWI9 3026 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 SIP14410 1827 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 A0A087WSZ3 146 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 TRDV1A0A1B0GX56 115 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 CCDC160A6NGH7 325 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 C5orf67F2Z3F1 127 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 C17orf112F2Z3M2 114 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 M0R2N4 97 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 CCL16O15467 120 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 CST7O76096 145 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 NBEAP1P0C6P0 100 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 RAB5CP51148 216 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 CDK6Q00534 326 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 ANGPTL5Q86XS5 388 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 IFT20Q8IY31 132 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 OR5D14Q8NGL3 314 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 GRPEL2Q8TAA5 225 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 Q8TAT8 98 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 THEM6Q8WUY1 208 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 PATE1Q8WXA2 126 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 EFCAB11Q9BUY7 163 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 CCDC32Q9BV29 185 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 OR2H1Q9GZK4 316 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 MED12Q93074 2177 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 MUC2Q02817 5179 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 ANKRD50Q9ULJ7 1429 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 ZGRF1Q86YA3 2104 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 TET1Q8NFU7 2136 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 FCGBPQ9Y6R7 5405 aaPredicted RBP0.95□□□□□ -2.26
CD44-234ENST00000531873 LY75O60449 1722 aa0.95□□□□□ -2.26
CD44-234ENST00000531873 ASCC3Q8N3C0 2202 aaKnown RBP0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms