RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 GYPEP15421 78 aa12.66□□□□□ -0.38
TSPAN4-216ENST00000526055 SULT1A2P50226 295 aa12.66□□□□□ -0.38
TSPAN4-216ENST00000526055 NKX2-5P52952 324 aaPredicted RBP12.66□□□□□ -0.38
TSPAN4-216ENST00000526055 KRTAP1-5Q9BYS1 174 aa12.66□□□□□ -0.38
TSPAN4-216ENST00000526055 RS1O15537 224 aa12.65□□□□□ -0.38
TSPAN4-216ENST00000526055 NXPH4O95158 308 aa12.65□□□□□ -0.38
TSPAN4-216ENST00000526055 GATA1P15976 413 aaPredicted RBP12.65□□□□□ -0.38
TSPAN4-216ENST00000526055 UBE2G1P62253 170 aa12.65□□□□□ -0.38
TSPAN4-216ENST00000526055 CST9LP1Q5W188 147 aa12.65□□□□□ -0.38
TSPAN4-216ENST00000526055 IGKV3D-20A0A0C4DH25 116 aa12.64□□□□□ -0.39
TSPAN4-216ENST00000526055 K7EP13 123 aa12.64□□□□□ -0.39
TSPAN4-216ENST00000526055 RNASE3P12724 160 aaKnown RBP12.64□□□□□ -0.39
TSPAN4-216ENST00000526055 TNP2Q05952 138 aa12.64□□□□□ -0.39
TSPAN4-216ENST00000526055 CFAP126Q5VTH2 177 aa12.64□□□□□ -0.39
TSPAN4-216ENST00000526055 S100A9P06702 114 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-216ENST00000526055 MED14OSP0DP75 135 aa12.63□□□□□ -0.39
TSPAN4-216ENST00000526055 S100A4P26447 101 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-216ENST00000526055 ASIPP42127 132 aa12.63□□□□□ -0.39
TSPAN4-216ENST00000526055 TIRAPP58753 221 aa12.63□□□□□ -0.39
TSPAN4-216ENST00000526055 TRAV1-1A0A0B4J248 108 aa12.62□□□□□ -0.39
TSPAN4-216ENST00000526055 TRBV6-4A0A1B0GX49 114 aa12.62□□□□□ -0.39
TSPAN4-216ENST00000526055 PAGE4O60829 102 aa12.62□□□□□ -0.39
TSPAN4-216ENST00000526055 LTAP01374 205 aa12.62□□□□□ -0.39
TSPAN4-216ENST00000526055 ZNF506Q5JVG8 444 aa12.62□□□□□ -0.39
TSPAN4-216ENST00000526055 DNLZQ5SXM8 178 aa12.62□□□□□ -0.39
TSPAN4-216ENST00000526055 FAM162BQ5T6X4 162 aa12.62□□□□□ -0.39
TSPAN4-216ENST00000526055 PRADC1Q9BSG0 188 aa12.62□□□□□ -0.39
TSPAN4-216ENST00000526055 IL36BQ9NZH7 164 aa12.62□□□□□ -0.39
TSPAN4-216ENST00000526055 BOLA1Q9Y3E2 137 aa12.62□□□□□ -0.39
TSPAN4-216ENST00000526055 TRAV9-2A0A087WT02 112 aa12.61□□□□□ -0.39
TSPAN4-216ENST00000526055 PGPEP1LA6NFU8 196 aa12.61□□□□□ -0.39
TSPAN4-216ENST00000526055 B4DEV8 164 aa12.61□□□□□ -0.39
TSPAN4-216ENST00000526055 MGST1P10620 155 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-216ENST00000526055 AKR1C3P42330 323 aa12.61□□□□□ -0.39
TSPAN4-216ENST00000526055 RHOHQ15669 191 aa12.61□□□□□ -0.39
TSPAN4-216ENST00000526055 ZC2HC1AQ96GY0 325 aa12.61□□□□□ -0.39
TSPAN4-216ENST00000526055 KRTAP17-1Q9BYP8 105 aa12.61□□□□□ -0.39
TSPAN4-216ENST00000526055 A8MWV9 139 aa12.6□□□□□ -0.39
TSPAN4-216ENST00000526055 CRIP1P50238 77 aa12.6□□□□□ -0.39
TSPAN4-216ENST00000526055 ZNF674Q2M3X9 581 aa12.6□□□□□ -0.39
TSPAN4-216ENST00000526055 ZFP2Q6ZN57 461 aa12.6□□□□□ -0.39
TSPAN4-216ENST00000526055 PKD1P98161 4303 aa12.6□□□□□ -0.39
TSPAN4-216ENST00000526055 KRBOX1C9JBD0 128 aa12.59□□□□□ -0.39
TSPAN4-216ENST00000526055 SH2D1AO60880 128 aa12.59□□□□□ -0.39
TSPAN4-216ENST00000526055 ALKAL2Q6UX46 152 aa12.59□□□□□ -0.39
TSPAN4-216ENST00000526055 SLC25A29Q8N8R3 303 aa12.59□□□□□ -0.39
TSPAN4-216ENST00000526055 MANBALQ9NQG1 85 aa12.59□□□□□ -0.39
TSPAN4-216ENST00000526055 LY96Q9Y6Y9 160 aa12.59□□□□□ -0.39
TSPAN4-216ENST00000526055 DNAH11Q96DT5 4516 aa12.58□□□□□ -0.4
TSPAN4-216ENST00000526055 A0A1B0GV50 99 aa12.58□□□□□ -0.4
TSPAN4-216ENST00000526055 LINC00315P59091 139 aa12.58□□□□□ -0.4
TSPAN4-216ENST00000526055 BLOC1S1P78537 153 aa12.58□□□□□ -0.4
TSPAN4-216ENST00000526055 LINC01559Q495D7 138 aa12.58□□□□□ -0.4
TSPAN4-216ENST00000526055 NHLRC2Q8NBF2 726 aa12.58□□□□□ -0.4
TSPAN4-216ENST00000526055 LOC100131303A0A0U1RQF7 123 aa12.57□□□□□ -0.4
TSPAN4-216ENST00000526055 DNAH10OSP0CZ25 163 aa12.57□□□□□ -0.4
TSPAN4-216ENST00000526055 NFE4Q86UQ8 179 aa12.57□□□□□ -0.4
TSPAN4-216ENST00000526055 SYT8Q8NBV8 401 aa12.57□□□□□ -0.4
TSPAN4-216ENST00000526055 PARLQ9H300 379 aa12.57□□□□□ -0.4
TSPAN4-216ENST00000526055 IFNA1P01562 189 aa12.56□□□□□ -0.4
TSPAN4-216ENST00000526055 EVI2AP22794 236 aa12.56□□□□□ -0.4
TSPAN4-216ENST00000526055 C10orf126Q8N4M7 172 aa12.56□□□□□ -0.4
TSPAN4-216ENST00000526055 SCO2A0A1W2PP80 73 aa12.55□□□□□ -0.4
TSPAN4-216ENST00000526055 H3BVH4 76 aa12.55□□□□□ -0.4
TSPAN4-216ENST00000526055 RHODO00212 210 aa12.55□□□□□ -0.4
TSPAN4-216ENST00000526055 ARMS2P0C7Q2 107 aa12.55□□□□□ -0.4
TSPAN4-216ENST00000526055 Q6ZRN7 208 aaPredicted RBP12.55□□□□□ -0.4
TSPAN4-216ENST00000526055 WFDC10BQ8IUB3 73 aa12.55□□□□□ -0.4
TSPAN4-216ENST00000526055 SCRT2Q9NQ03 307 aa12.55□□□□□ -0.4
TSPAN4-216ENST00000526055 DYNC1H1Q14204 4646 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-216ENST00000526055 IGHV3-73A0A0B4J1V6 119 aa12.54□□□□□ -0.4
TSPAN4-216ENST00000526055 M0R036 132 aa12.54□□□□□ -0.4
TSPAN4-216ENST00000526055 TAGLN2P37802 199 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-216ENST00000526055 ZNF575Q86XF7 245 aa12.54□□□□□ -0.4
TSPAN4-216ENST00000526055 BAGE2Q86Y30 109 aa12.54□□□□□ -0.4
TSPAN4-216ENST00000526055 MLST8Q9BVC4 326 aa12.54□□□□□ -0.4
TSPAN4-216ENST00000526055 GNG13Q9P2W3 67 aa12.54□□□□□ -0.4
TSPAN4-216ENST00000526055 KIAA1109Q2LD37 5005 aa12.54□□□□□ -0.4
TSPAN4-216ENST00000526055 C16orf90A8MZG2 172 aa12.53□□□□□ -0.4
TSPAN4-216ENST00000526055 CXCL1P09341 107 aa12.53□□□□□ -0.4
TSPAN4-216ENST00000526055 CCL20P78556 96 aa12.53□□□□□ -0.4
TSPAN4-216ENST00000526055 DMRTA1Q5VZB9 504 aa12.53□□□□□ -0.4
TSPAN4-216ENST00000526055 UFSP1Q6NVU6 142 aa12.53□□□□□ -0.4
TSPAN4-216ENST00000526055 PHLDA3Q9Y5J5 127 aa12.53□□□□□ -0.4
TSPAN4-216ENST00000526055 TRAV8-6A0A0B4J262 113 aa12.52□□□□□ -0.41
TSPAN4-216ENST00000526055 GRIFINA4D1Z8 144 aa12.52□□□□□ -0.41
TSPAN4-216ENST00000526055 ATP6V0E2Q8NHE4 81 aa12.52□□□□□ -0.41
TSPAN4-216ENST00000526055 C11orf52Q96A22 123 aa12.52□□□□□ -0.41
TSPAN4-216ENST00000526055 GTSF1LQ9H1H1 148 aa12.52□□□□□ -0.41
TSPAN4-216ENST00000526055 MSRB1Q9NZV6 116 aa12.52□□□□□ -0.41
TSPAN4-216ENST00000526055 PCLOQ9Y6V0 5065 aa12.51□□□□□ -0.41
TSPAN4-216ENST00000526055 IGHV3-38A0A0C4DH36 116 aa12.51□□□□□ -0.41
TSPAN4-216ENST00000526055 LINC01556Q5JQF7 62 aa12.51□□□□□ -0.41
TSPAN4-216ENST00000526055 LELP1Q5T871 98 aa12.51□□□□□ -0.41
TSPAN4-216ENST00000526055 ZFP82Q8N141 532 aa12.51□□□□□ -0.41
TSPAN4-216ENST00000526055 CRYGDP07320 174 aa12.5□□□□□ -0.41
TSPAN4-216ENST00000526055 TEX261Q6UWH6 196 aa12.5□□□□□ -0.41
TSPAN4-216ENST00000526055 SPATA12Q7Z6I5 190 aa12.5□□□□□ -0.41
TSPAN4-216ENST00000526055 SFRP2Q96HF1 295 aa12.5□□□□□ -0.41
TSPAN4-216ENST00000526055 EREGO14944 169 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms