RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 CADP27708 2225 aa0.47□□□□□ -2.33
CD44-215ENST00000525241 A2MP01023 1474 aa0.47□□□□□ -2.33
CD44-215ENST00000525241 CEP152O94986 1710 aa0.47□□□□□ -2.33
CD44-215ENST00000525241 PLXNA1Q9UIW2 1896 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 GNG14A0A1W2PPG7 69 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 JMJD7-PLA2G4BH0Y9G9 81 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 K7EIL1 84 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 FAM107AO95990 144 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 DNAL4O96015 105 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 FABP2P12104 132 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 SDC2P34741 201 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 FOXA3P55318 350 aaPredicted RBP0.46□□□□□ -2.34
CD44-215ENST00000525241 RPS28P62857 69 aaKnown RBP0.46□□□□□ -2.34
CD44-215ENST00000525241 MRPS36P82909 103 aaKnown RBP0.46□□□□□ -2.34
CD44-215ENST00000525241 SAMD13Q5VXD3 122 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 OR9Q1Q8NGQ5 310 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 CLEC2BQ92478 149 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 PRELID3AQ96N28 172 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 OR4C12Q96R67 309 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 NABP2Q9BQ15 211 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 LIMD2Q9BT23 127 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 CST11Q9H112 138 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 LRP1BQ9NZR2 4599 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 DLEC1Q9Y238 1755 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 PTPRGP23470 1445 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 ARHGAP31Q2M1Z3 1444 aa0.46□□□□□ -2.34
CD44-215ENST00000525241 MED23Q9ULK4 1368 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 CASZ1Q86V15 1759 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 IGLV3-32A0A0A0MS00 114 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 A0A1B0GX51 115 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 LYRM1O43325 122 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 PPYP01298 95 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 MT-ND6P03923 174 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 PDE6GP18545 87 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 MAXP61244 160 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 DR1Q01658 176 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 DIAPH2-AS1Q14236 149 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 IZUMO2Q6UXV1 221 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 LINC00305Q7Z4B0 112 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 TEN1Q86WV5 123 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 OR5H6Q8NGV6 325 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 GRPEL2Q8TAA5 225 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 TCEAL2Q9H3H9 227 aaPredicted RBP0.45□□□□□ -2.34
CD44-215ENST00000525241 TMEM14CQ9P0S9 112 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 TRAPPC2LQ9UL33 140 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 GINS2Q9Y248 185 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 TPRKBQ9Y3C4 175 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 PRKDCP78527 4128 aaKnown RBP0.45□□□□□ -2.34
CD44-215ENST00000525241 OVOS2A0A0G2JMS6 1433 aa0.45□□□□□ -2.34
CD44-215ENST00000525241 CACNA1EQ15878 2313 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 AKAP11Q9UKA4 1901 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 TRAV13-1A0A0B4J241 112 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 H3BRM9 83 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 SAA1P0DJI8 122 aaPredicted RBP0.44□□□□□ -2.34
CD44-215ENST00000525241 CRYGSP22914 178 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 RPL22P35268 128 aaKnown RBP0.44□□□□□ -2.34
CD44-215ENST00000525241 VMA21Q3ZAQ7 101 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 LINC00575Q6W349 94 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 GKN2Q86XP6 184 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 DEFB123Q8N688 67 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 TEX29Q8N6K0 151 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 OR4B1Q8NGF8 309 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 OR51A4Q8NGJ6 313 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 ZNF431Q8TF32 576 aaPredicted RBP0.44□□□□□ -2.34
CD44-215ENST00000525241 MRPL40Q9NQ50 206 aaKnown RBP0.44□□□□□ -2.34
CD44-215ENST00000525241 HSPB8Q9UJY1 196 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 TNFSF18Q9UNG2 199 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 FGD6Q6ZV73 1430 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 PKHD1P08F94 4074 aa0.44□□□□□ -2.34
CD44-215ENST00000525241 DSPPQ9NZW4 1301 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 HECTD4Q9Y4D8 3996 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 MRC2Q9UBG0 1479 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 BIVM-ERCC5R4GMW8 1640 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 DNAH7Q8WXX0 4024 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 TRAV36DV7A0A075B6V5 113 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 H3BMG7 143 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 J3KT08 172 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 NCR3O14931 201 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 IGHV3-30P01768 117 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 CD14P08571 375 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 IGHV3-30-5P0DP03 117 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 CIRBPQ14011 172 aaKnown RBP0.43□□□□□ -2.34
CD44-215ENST00000525241 OR8B8Q15620 311 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 TMEM229BQ8NBD8 167 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 OR5A2Q8NGI9 324 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 OR10AC1Q8NH08 325 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 LXNQ9BS40 222 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 LPAR5Q9H1C0 372 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 TMEM138Q9NPI0 162 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 FKBP11Q9NYL4 201 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 JPT1Q9UK76 154 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 MPC1Q9Y5U8 109 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 LRP1Q07954 4544 aaKnown RBP0.43□□□□□ -2.34
CD44-215ENST00000525241 SLIT1O75093 1534 aa0.43□□□□□ -2.34
CD44-215ENST00000525241 ZNF142P52746 1687 aaPredicted RBP0.43□□□□□ -2.34
CD44-215ENST00000525241 SPTBN1Q01082 2364 aaKnown RBP0.42□□□□□ -2.34
CD44-215ENST00000525241 DMDP11532 3685 aa0.42□□□□□ -2.34
CD44-215ENST00000525241 BCORL1Q5H9F3 1711 aa0.42□□□□□ -2.34
CD44-215ENST00000525241 HRNRQ86YZ3 2850 aaPredicted RBP0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms