RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 MRPL23Q16540 153 aaKnown RBP3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 TOR2AQ5JU69 321 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 ZNF506Q5JVG8 444 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 PIK3CD-AS1Q5SR53 167 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 TEX261Q6UWH6 196 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 SH2D6Q7Z4S9 175 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 ZFP82Q8N141 532 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 PTH2Q96A98 100 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 PRADC1Q9BSG0 188 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 MLST8Q9BVC4 326 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 RAB19A4D1S5 217 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 M0R381 172 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 RS1O15537 224 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 NDUFS6O75380 124 aaKnown RBP3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 SFTA3P0C7M3 94 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 ARMS2P0C7Q2 107 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 RNASE3P12724 160 aaKnown RBP3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 GYPEP15421 78 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 SRIP30626 198 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 CRIP1P50238 77 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 CRYBA4P53673 196 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 FHL2Q14192 279 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 PEA15Q15121 130 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 RHOHQ15669 191 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 DNLZQ5SXM8 178 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 SPANXN1Q5VSR9 72 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 OR2D3Q8NGH3 330 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 LYPD6BQ8NI32 183 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 ZNF479Q96JC4 524 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 FAM210AQ96ND0 272 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 SMIM7Q9BQ49 75 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 TPPP3Q9BW30 176 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 PARLQ9H300 379 aa3.78□□□□□ -1.8
HMGB1P40-201ENST00000525121 TRBV6-4A0A1B0GX49 114 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 PGPEP1LA6NFU8 196 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 ZNF727A8MUV8 499 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 SMIM17P0DL12 118 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 RPL19P84098 196 aaKnown RBP3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 TTC32Q5I0X7 151 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 SOHLH1Q5JUK2 328 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 FAM74A4Q5TZK3 123 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 CFAP126Q5VTH2 177 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 ZFP2Q6ZN57 461 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 NEGR1Q7Z3B1 354 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 FER1L6-AS1Q8NA97 138 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 VSIG2Q96IQ7 327 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 AP1S3Q96PC3 154 aa3.77□□□□□ -1.81
HMGB1P40-201ENST00000525121 TRBV20OR9-2A0A075B6H5 130 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 IGLV2-18A0A075B6J9 118 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 A0A096LPF7 62 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 IGHV3-73A0A0B4J1V6 119 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 A0A1W2PPQ1 181 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 F2Z2F3 143 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 IGLV2-8P01709 118 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 OR5AL1P0C617 328 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 GATA1P15976 413 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 ERVFC1-1P60608 527 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 CACNG7P62955 275 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 ZNF56Q15929 161 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 FAM74A3Q4VXF1 159 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 DMRTA1Q5VZB9 504 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 C15orf54Q8N8G6 183 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 BORCS7Q96B45 105 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 SMDT1Q9H4I9 107 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 RPP21Q9H633 154 aaKnown RBP3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 SCRT2Q9NQ03 307 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 MRPS16Q9Y3D3 137 aaKnown RBP3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 LY96Q9Y6Y9 160 aa3.76□□□□□ -1.81
HMGB1P40-201ENST00000525121 TRAV9-2A0A087WT02 112 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 A0A087WWL8 130 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 C19orf71A6NCJ1 209 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 F5H697 171 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 K7EQD1 137 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 M0R2N4 97 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 SNAI2O43623 268 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 GATCO43716 136 aaKnown RBP3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 NXPH4O95158 308 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 SRP19P09132 144 aaKnown RBP3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 TRGC1P0CF51 173 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 SSTP61278 116 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 TMEM241Q24JQ0 296 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 SMIM15Q7Z3B0 74 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 SLC25A29Q8N8R3 303 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 NUDT10Q8NFP7 164 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 OR10AG1Q8NH19 301 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 OCC1Q8TAD7 63 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 NUDT11Q96G61 164 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 SFRP2Q96HF1 295 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 UPK3BQ9BT76 320 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 RNASE7Q9H1E1 156 aaKnown RBP3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 LINC00588Q9Y4M8 146 aa3.75□□□□□ -1.81
HMGB1P40-201ENST00000525121 TRAV8-6A0A0B4J262 113 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 MUC21A0A0G2JKD1 596 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 TRBV10-1A0A0K0K1A3 114 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 NBDYA0A0U1RRE5 68 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 MUC21A0A140T8X8 626 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 A8MWL6 223 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 H7C1H1 209 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 K7EN84 100 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms