RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 RNASE3P12724 160 aaKnown RBP11.35□□□□□ -0.59
BEST1-204ENST00000524926 GATA1P15976 413 aaPredicted RBP11.35□□□□□ -0.59
BEST1-204ENST00000524926 MED14OSP0DP75 135 aa11.35□□□□□ -0.59
BEST1-204ENST00000524926 LINC00173Q6ZV60 143 aa11.35□□□□□ -0.59
BEST1-204ENST00000524926 ZMAT5Q9UDW3 170 aaKnown RBP11.35□□□□□ -0.59
BEST1-204ENST00000524926 TRAV2A0A0B4J234 112 aa11.34□□□□□ -0.59
BEST1-204ENST00000524926 TNFRSF6BO95407 300 aa11.34□□□□□ -0.59
BEST1-204ENST00000524926 ZNF124Q15973 351 aa11.34□□□□□ -0.59
BEST1-204ENST00000524926 TMEM70Q9BUB7 260 aa11.34□□□□□ -0.59
BEST1-204ENST00000524926 VAMP8Q9BV40 100 aa11.34□□□□□ -0.59
BEST1-204ENST00000524926 MAP1LC3AQ9H492 121 aa11.34□□□□□ -0.59
BEST1-204ENST00000524926 SCRT2Q9NQ03 307 aa11.34□□□□□ -0.59
BEST1-204ENST00000524926 PAM16Q9Y3D7 125 aa11.34□□□□□ -0.59
BEST1-204ENST00000524926 TRAV26-2A0A0B4J265 109 aa11.34□□□□□ -0.59
BEST1-204ENST00000524926 DDTP30046 118 aa11.34□□□□□ -0.59
BEST1-204ENST00000524926 FXYD7P58549 80 aa11.34□□□□□ -0.59
BEST1-204ENST00000524926 OTOGQ6ZRI0 2925 aa11.34□□□□□ -0.59
BEST1-204ENST00000524926 LAMTOR2Q9Y2Q5 125 aa11.33□□□□□ -0.6
BEST1-204ENST00000524926 AMTNQ6UX39 209 aa11.33□□□□□ -0.6
BEST1-204ENST00000524926 C14orf178Q8N769 122 aaPredicted RBP11.33□□□□□ -0.6
BEST1-204ENST00000524926 HSPB8Q9UJY1 196 aa11.33□□□□□ -0.6
BEST1-204ENST00000524926 OR4C46A6NHA9 309 aa11.32□□□□□ -0.6
BEST1-204ENST00000524926 INAFM1C9JVW0 142 aa11.32□□□□□ -0.6
BEST1-204ENST00000524926 NDUFA7O95182 113 aa11.32□□□□□ -0.6
BEST1-204ENST00000524926 ATOH7Q8N100 152 aa11.32□□□□□ -0.6
BEST1-204ENST00000524926 OR2K2Q8NGT1 345 aa11.32□□□□□ -0.6
BEST1-204ENST00000524926 H3BMM0 161 aa11.31□□□□□ -0.6
BEST1-204ENST00000524926 HLA-DRB4P13762 266 aa11.31□□□□□ -0.6
BEST1-204ENST00000524926 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
BEST1-204ENST00000524926 MAP1LC3CQ9BXW4 147 aa11.31□□□□□ -0.6
BEST1-204ENST00000524926 MAP6D1Q9H9H5 199 aa11.31□□□□□ -0.6
BEST1-204ENST00000524926 HLA-DRB4X5D2U9 266 aa11.31□□□□□ -0.6
BEST1-204ENST00000524926 DPH3P1Q9H4G8 78 aa11.31□□□□□ -0.6
BEST1-204ENST00000524926 H0Y8G0 127 aa11.3□□□□□ -0.6
BEST1-204ENST00000524926 SYS1-DBNDD2H3BUS1 97 aa11.3□□□□□ -0.6
BEST1-204ENST00000524926 PROK1P58294 105 aa11.3□□□□□ -0.6
BEST1-204ENST00000524926 NSUN5P1Q3KNT7 163 aa11.3□□□□□ -0.6
BEST1-204ENST00000524926 MUC4Q99102 2169 aa11.3□□□□□ -0.6
BEST1-204ENST00000524926 IGHV1OR15-1A0A075B7D0 117 aa11.3□□□□□ -0.6
BEST1-204ENST00000524926 DEFA6Q01524 100 aa11.3□□□□□ -0.6
BEST1-204ENST00000524926 SPATA12Q7Z6I5 190 aa11.3□□□□□ -0.6
BEST1-204ENST00000524926 Q8N1Y9 231 aa11.3□□□□□ -0.6
BEST1-204ENST00000524926 ZNF256Q9Y2P7 627 aaPredicted RBP11.3□□□□□ -0.6
BEST1-204ENST00000524926 KIR2DL5BA0A0G2JN68 375 aa11.29□□□□□ -0.6
BEST1-204ENST00000524926 KIR2DL5BA0A0G2JPC4 375 aa11.29□□□□□ -0.6
BEST1-204ENST00000524926 MGPP08493 103 aa11.29□□□□□ -0.6
BEST1-204ENST00000524926 KIR2DL5AQ8N109 375 aa11.29□□□□□ -0.6
BEST1-204ENST00000524926 AP1S3Q96PC3 154 aa11.29□□□□□ -0.6
BEST1-204ENST00000524926 NXT2Q9NPJ8 142 aaKnown RBP11.29□□□□□ -0.6
BEST1-204ENST00000524926 MDFICQ9P1T7 246 aa11.29□□□□□ -0.6
BEST1-204ENST00000524926 A0A096LNJ9 63 aa11.29□□□□□ -0.6
BEST1-204ENST00000524926 MRAP2Q96G30 205 aa11.29□□□□□ -0.6
BEST1-204ENST00000524926 TRAV25A0A0B4J276 109 aa11.28□□□□□ -0.6
BEST1-204ENST00000524926 IGHV3-16A0A0C4DH30 117 aa11.28□□□□□ -0.6
BEST1-204ENST00000524926 CRXO43186 299 aaPredicted RBP11.28□□□□□ -0.6
BEST1-204ENST00000524926 NRACQ8N912 160 aa11.28□□□□□ -0.6
BEST1-204ENST00000524926 ZNF747Q9BV97 191 aa11.28□□□□□ -0.6
BEST1-204ENST00000524926 RBMY1BA6NDE4 496 aaKnown RBP11.28□□□□□ -0.6
BEST1-204ENST00000524926 RBMY1EA6NEQ0 496 aaKnown RBP11.28□□□□□ -0.6
BEST1-204ENST00000524926 HBDP02042 147 aa11.28□□□□□ -0.6
BEST1-204ENST00000524926 RBMY1DP0C7P1 496 aaKnown RBP11.28□□□□□ -0.6
BEST1-204ENST00000524926 HTN1P15515 57 aa11.28□□□□□ -0.6
BEST1-204ENST00000524926 MCRIP2Q9BUT9 160 aaKnown RBP11.28□□□□□ -0.6
BEST1-204ENST00000524926 SMIM17P0DL12 118 aa11.27□□□□□ -0.6
BEST1-204ENST00000524926 SPATA45Q537H7 98 aa11.27□□□□□ -0.6
BEST1-204ENST00000524926 ZNF705AQ6ZN79 300 aaPredicted RBP11.27□□□□□ -0.6
BEST1-204ENST00000524926 C20orf202A1L168 122 aa11.27□□□□□ -0.61
BEST1-204ENST00000524926 SAP30O75446 220 aa11.27□□□□□ -0.61
BEST1-204ENST00000524926 NXPH4O95158 308 aa11.27□□□□□ -0.61
BEST1-204ENST00000524926 Q8N8P6 123 aa11.27□□□□□ -0.61
BEST1-204ENST00000524926 C20orf144Q9BQM9 153 aa11.27□□□□□ -0.61
BEST1-204ENST00000524926 JPT2Q9H910 190 aa11.27□□□□□ -0.61
BEST1-204ENST00000524926 CBY3A6NI87 242 aa11.26□□□□□ -0.61
BEST1-204ENST00000524926 RBMY1A1P0DJD3 496 aaKnown RBP11.26□□□□□ -0.61
BEST1-204ENST00000524926 RBMY1CP0DJD4 496 aa11.26□□□□□ -0.61
BEST1-204ENST00000524926 RBMY1FQ15415 496 aaKnown RBP11.26□□□□□ -0.61
BEST1-204ENST00000524926 MAJINQ3KP22 176 aa11.26□□□□□ -0.61
BEST1-204ENST00000524926 PET117Q6UWS5 81 aa11.26□□□□□ -0.61
BEST1-204ENST00000524926 SETXQ7Z333 2677 aaKnown RBP11.26□□□□□ -0.61
BEST1-204ENST00000524926 A8MTW9 85 aa11.26□□□□□ -0.61
BEST1-204ENST00000524926 ADARB2-AS1A8MUL3 147 aa11.26□□□□□ -0.61
BEST1-204ENST00000524926 C9orf85Q96MD7 179 aa11.26□□□□□ -0.61
BEST1-204ENST00000524926 ODF3L2Q3SX64 289 aa11.25□□□□□ -0.61
BEST1-204ENST00000524926 C14orf144Q96I85 54 aa11.25□□□□□ -0.61
BEST1-204ENST00000524926 A0A087WWL8 130 aa11.25□□□□□ -0.61
BEST1-204ENST00000524926 NDUFAF3Q9BU61 184 aa11.25□□□□□ -0.61
BEST1-204ENST00000524926 IGLV2-18A0A075B6J9 118 aa11.24□□□□□ -0.61
BEST1-204ENST00000524926 TRGV11A0A075B6L2 103 aa11.24□□□□□ -0.61
BEST1-204ENST00000524926 LINC01546A6NGU7 62 aa11.24□□□□□ -0.61
BEST1-204ENST00000524926 PRSS47A8MTI9 375 aa11.24□□□□□ -0.61
BEST1-204ENST00000524926 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
BEST1-204ENST00000524926 RASL10AQ92737 203 aa11.24□□□□□ -0.61
BEST1-204ENST00000524926 RPL39LQ96EH5 51 aaKnown RBP11.24□□□□□ -0.61
BEST1-204ENST00000524926 TRAV9-2A0A087WT02 112 aa11.24□□□□□ -0.61
BEST1-204ENST00000524926 OR11H12B2RN74 326 aa11.24□□□□□ -0.61
BEST1-204ENST00000524926 KRTAP10-3P60369 221 aa11.24□□□□□ -0.61
BEST1-204ENST00000524926 PMCHL2Q9BQD1 86 aa11.24□□□□□ -0.61
BEST1-204ENST00000524926 KIF25-AS1Q9Y6Z4 181 aa11.24□□□□□ -0.61
BEST1-204ENST00000524926 TCAPO15273 167 aa11.23□□□□□ -0.61
BEST1-204ENST00000524926 FCER1GP30273 86 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms