RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 BAALCQ8WXS3 180 aa10.01□□□□□ -0.81
CAPN1-202ENST00000524773 PLNP26678 52 aa10.01□□□□□ -0.81
CAPN1-202ENST00000524773 CKS1BP61024 79 aa10.01□□□□□ -0.81
CAPN1-202ENST00000524773 SUMO2P61956 95 aaKnown RBP10.01□□□□□ -0.81
CAPN1-202ENST00000524773 ATP6V0BQ99437 205 aa10.01□□□□□ -0.81
CAPN1-202ENST00000524773 SCGB2A1O75556 95 aa10□□□□□ -0.81
CAPN1-202ENST00000524773 MT-ATP8P03928 68 aa10□□□□□ -0.81
CAPN1-202ENST00000524773 RNASE4P34096 147 aaKnown RBP10□□□□□ -0.81
CAPN1-202ENST00000524773 RPL39P62891 51 aaKnown RBP10□□□□□ -0.81
CAPN1-202ENST00000524773 UNQ9165/PRO28630Q6UXU0 137 aa10□□□□□ -0.81
CAPN1-202ENST00000524773 Q6ZS46 218 aa10□□□□□ -0.81
CAPN1-202ENST00000524773 Q8N6K4 173 aa10□□□□□ -0.81
CAPN1-202ENST00000524773 C1orf122Q6ZSJ8 110 aa10□□□□□ -0.81
CAPN1-202ENST00000524773 NEXN-AS1Q8NBZ9 246 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 KIR2DL4Q99706 377 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.99□□□□□ -0.812e-8■■■□□ 16
CAPN1-202ENST00000524773 IGHV3-64A0A075B6Q5 118 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 H7C2G1 150 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 J3QR89 54 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 IGHV3-11P01762 117 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 KLRB1Q12918 225 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 ANXA2RQ3ZCQ2 193 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 PSMG4Q5JS54 123 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 TIMD4Q96H15 378 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 PHLDA3Q9Y5J5 127 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 TRAV26-1A0A087WT03 109 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 TSPAN13O95857 204 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 EDN2P20800 178 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 METTL26Q96S19 204 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 SPATA25Q9BR10 227 aa9.99□□□□□ -0.81
CAPN1-202ENST00000524773 A0A087WWL8 130 aa9.98□□□□□ -0.81
CAPN1-202ENST00000524773 RNF223E7ERA6 249 aa9.98□□□□□ -0.81
CAPN1-202ENST00000524773 SRSF2Q01130 221 aaKnown RBP9.98□□□□□ -0.81
CAPN1-202ENST00000524773 OPRPNQ99935 248 aaPredicted RBP9.98□□□□□ -0.81
CAPN1-202ENST00000524773 CREBBPQ92793 2442 aa9.98□□□□□ -0.81
CAPN1-202ENST00000524773 MUC4Q99102 2169 aa9.98□□□□□ -0.81
CAPN1-202ENST00000524773 C11orf86A6NJI1 115 aa9.98□□□□□ -0.81
CAPN1-202ENST00000524773 FOXI1Q12951 378 aa9.98□□□□□ -0.81
CAPN1-202ENST00000524773 SAA4P35542 130 aa9.97□□□□□ -0.81
CAPN1-202ENST00000524773 TSPEAR-AS2P59090 65 aa9.97□□□□□ -0.81
CAPN1-202ENST00000524773 TOMM6Q96B49 74 aa9.97□□□□□ -0.81
CAPN1-202ENST00000524773 SLC50A1Q9BRV3 221 aa9.97□□□□□ -0.81
CAPN1-202ENST00000524773 CDIP1Q9H305 208 aa9.97□□□□□ -0.81
CAPN1-202ENST00000524773 DOPEY2Q9Y3R5 2298 aa9.97□□□□□ -0.81
CAPN1-202ENST00000524773 A0A1W2PPR1 153 aa9.96□□□□□ -0.81
CAPN1-202ENST00000524773 CRYGDP07320 174 aa9.96□□□□□ -0.81
CAPN1-202ENST00000524773 TSHBP01222 138 aa9.96□□□□□ -0.82
CAPN1-202ENST00000524773 XGP55808 180 aa9.96□□□□□ -0.82
CAPN1-202ENST00000524773 FAM110DQ8TAY7 271 aaPredicted RBP9.96□□□□□ -0.82
CAPN1-202ENST00000524773 RAX2Q96IS3 184 aa9.96□□□□□ -0.82
CAPN1-202ENST00000524773 A0A1B0GV72 72 aa9.96□□□□□ -0.82
CAPN1-202ENST00000524773 M0R1W7 72 aa9.96□□□□□ -0.82
CAPN1-202ENST00000524773 SPINK8P0C7L1 97 aa9.96□□□□□ -0.82
CAPN1-202ENST00000524773 GATA3P23771 443 aa9.96□□□□□ -0.82
CAPN1-202ENST00000524773 CFAP126Q5VTH2 177 aa9.96□□□□□ -0.82
CAPN1-202ENST00000524773 ZFAND2AQ8N6M9 145 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 CARD19Q96LW7 228 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 UBTD1Q9HAC8 227 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 TP53TG1Q9Y2A0 90 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 RBAKDNA6NC62 111 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 TCL1BO95988 128 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 TAL2Q16559 108 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 TMEM170BQ5T4T1 132 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 FAM74A4Q5TZK3 123 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 C9orf47Q6ZRZ4 202 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 GPHB5Q86YW7 130 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 AJUBAQ96IF1 538 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 CACNA1AO00555 2505 aa9.95□□□□□ -0.82
CAPN1-202ENST00000524773 F5H697 171 aa9.94□□□□□ -0.82
CAPN1-202ENST00000524773 IGKV3-20P01619 116 aa9.94□□□□□ -0.82
CAPN1-202ENST00000524773 DLX4Q92988 240 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-202ENST00000524773 C1QTNF4Q9BXJ3 329 aa9.94□□□□□ -0.82
CAPN1-202ENST00000524773 CSPG4Q6UVK1 2322 aa9.94□□□□□ -0.82
CAPN1-202ENST00000524773 ORMDL2Q53FV1 153 aa9.94□□□□□ -0.82
CAPN1-202ENST00000524773 BRD3OSQ6XYD6 125 aa9.94□□□□□ -0.82
CAPN1-202ENST00000524773 OOSP1A8MZH6 123 aa9.93□□□□□ -0.82
CAPN1-202ENST00000524773 CRIP2P52943 208 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-202ENST00000524773 GEMIN7Q9H840 131 aaKnown RBP9.93□□□□□ -0.82
CAPN1-202ENST00000524773 TRAV12-1A0A0B4J245 112 aa9.93□□□□□ -0.82
CAPN1-202ENST00000524773 EEF1AKMT3Q96AZ1 226 aa9.93□□□□□ -0.82
CAPN1-202ENST00000524773 MRAP2Q96G30 205 aa9.93□□□□□ -0.82
CAPN1-202ENST00000524773 DPH3P1Q9H4G8 78 aa9.93□□□□□ -0.82
CAPN1-202ENST00000524773 ZNF580Q9UK33 172 aa9.93□□□□□ -0.82
CAPN1-202ENST00000524773 ZNF256Q9Y2P7 627 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-202ENST00000524773 HIVEP3Q5T1R4 2406 aa9.93□□□□□ -0.82
CAPN1-202ENST00000524773 SCGB1C2P0DMR2 95 aa9.93□□□□□ -0.82
CAPN1-202ENST00000524773 COX6B1P14854 86 aa9.93□□□□□ -0.82
CAPN1-202ENST00000524773 ASIPP42127 132 aa9.93□□□□□ -0.82
CAPN1-202ENST00000524773 CRYBA4P53673 196 aa9.93□□□□□ -0.82
CAPN1-202ENST00000524773 IGLV4-69A0A075B6H9 119 aa9.92□□□□□ -0.82
CAPN1-202ENST00000524773 RNASE3P12724 160 aaKnown RBP9.92□□□□□ -0.82
CAPN1-202ENST00000524773 LY6EQ16553 131 aa9.92□□□□□ -0.82
CAPN1-202ENST00000524773 TRPT1Q86TN4 253 aaKnown RBP9.92□□□□□ -0.82
CAPN1-202ENST00000524773 UTP20O75691 2785 aaKnown RBP9.92□□□□□ -0.82
CAPN1-202ENST00000524773 PKD1L2Q7Z442 2459 aa9.92□□□□□ -0.82
CAPN1-202ENST00000524773 ADARB2-AS1A8MUL3 147 aa9.91□□□□□ -0.82
CAPN1-202ENST00000524773 CD7P09564 240 aa9.91□□□□□ -0.82
CAPN1-202ENST00000524773 LY6DQ14210 128 aa9.91□□□□□ -0.82
CAPN1-202ENST00000524773 EBI3Q14213 229 aa9.91□□□□□ -0.82
CAPN1-202ENST00000524773 ZNRF2Q8NHG8 242 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms