RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 IGKV1D-17A0A075B6S4 117 aa2.21□□□□□ -2.06
SKP1-209ENST00000522552 SLC25A6P12236 298 aa2.21□□□□□ -2.06
SKP1-209ENST00000522552 IL7P13232 177 aa2.21□□□□□ -2.06
SKP1-209ENST00000522552 Q0VG73 95 aa2.21□□□□□ -2.06
SKP1-209ENST00000522552 IQCJQ1A5X6 159 aa2.21□□□□□ -2.06
SKP1-209ENST00000522552 C1orf137Q5JT78 98 aa2.21□□□□□ -2.06
SKP1-209ENST00000522552 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.21□□□□□ -2.06
SKP1-209ENST00000522552 ABCC5O15440 1437 aa2.21□□□□□ -2.06
SKP1-209ENST00000522552 CPSF1Q10570 1443 aaKnown RBP2.21□□□□□ -2.06
SKP1-209ENST00000522552 C10orf71Q711Q0 1435 aa2.21□□□□□ -2.06
SKP1-209ENST00000522552 CASKIN1Q8WXD9 1431 aa2.21□□□□□ -2.06
SKP1-209ENST00000522552 LAMB4A4D0S4 1761 aa2.2□□□□□ -2.06
SKP1-209ENST00000522552 H3BQ15 152 aa2.2□□□□□ -2.06
SKP1-209ENST00000522552 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
SKP1-209ENST00000522552 CBLN1P23435 193 aa2.2□□□□□ -2.06
SKP1-209ENST00000522552 PRRC2AP48634 2157 aaKnown RBP2.2□□□□□ -2.06
SKP1-209ENST00000522552 POLR2JP52435 117 aaKnown RBP2.2□□□□□ -2.06
SKP1-209ENST00000522552 ATP5EP56381 51 aaPredicted RBP2.2□□□□□ -2.06
SKP1-209ENST00000522552 LINC00315P59091 139 aa2.2□□□□□ -2.06
SKP1-209ENST00000522552 ELOBQ15370 118 aa2.2□□□□□ -2.06
SKP1-209ENST00000522552 C9orf116Q5BN46 136 aaPredicted RBP2.2□□□□□ -2.06
SKP1-209ENST00000522552 FREM1Q5H8C1 2179 aa2.2□□□□□ -2.06
SKP1-209ENST00000522552 SLC48A1Q6P1K1 146 aa2.2□□□□□ -2.06
SKP1-209ENST00000522552 LYPD1Q8N2G4 141 aa2.2□□□□□ -2.06
SKP1-209ENST00000522552 SPACA4Q8TDM5 124 aa2.2□□□□□ -2.06
SKP1-209ENST00000522552 NPVFQ9HCQ7 196 aa2.2□□□□□ -2.06
SKP1-209ENST00000522552 BAZ2BQ9UIF8 2168 aaKnown RBP2.2□□□□□ -2.06
SKP1-209ENST00000522552 SMAD5-AS1Q9Y6J3 95 aa2.2□□□□□ -2.06
SKP1-209ENST00000522552 MYH8P13535 1937 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 CEP192Q8TEP8 1941 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 A0A1W2PNN7 141 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 GNGT2O14610 69 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 IGLV6-57P01721 117 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 IGKCP01834 107 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 TFF1P04155 84 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 RHOHQ15669 191 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 IGFBP7Q16270 282 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 Q1T7F1 81 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 COMMD6Q7Z4G1 85 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 ZNF431Q8TF32 576 aaPredicted RBP2.19□□□□□ -2.06
SKP1-209ENST00000522552 PPDPFLQ8WWR9 84 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 COL4A5P29400 1685 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 MUC22E2RYF6 1773 aaPredicted RBP2.19□□□□□ -2.06
SKP1-209ENST00000522552 CASP8AP2Q9UKL3 1982 aa2.19□□□□□ -2.06
SKP1-209ENST00000522552 PIGBOS1A0A0B4J2F0 54 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 A0A1W2PNU3 283 aaPredicted RBP2.18□□□□□ -2.06
SKP1-209ENST00000522552 A6NIN4 97 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 CCKP06307 115 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 RPL7L1Q6DKI1 246 aaKnown RBP2.18□□□□□ -2.06
SKP1-209ENST00000522552 SPTSSBQ8NFR3 76 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 OR10AG1Q8NH19 301 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 PTPRMP28827 1452 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 GAPVD1Q14C86 1478 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 RTEL1-TNFRSF6BF6WH68 1400 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 DAPK1P53355 1430 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 ZGRF1Q86YA3 2104 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 PLEKHH2Q8IVE3 1493 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 CXorf51AA0A1B0GTR3 108 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 A8MU10 97 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 F8W1H4 67 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 LINC00167Q96N53 147 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 ZSWIM8A7E2V4 1837 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 PARP14Q460N5 1801 aa2.18□□□□□ -2.06
SKP1-209ENST00000522552 DOCK10Q96BY6 2186 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 SCAPERQ9BY12 1400 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 SDHAF1A6NFY7 115 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 IGHV3-33P01772 117 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 PRR9Q5T870 116 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 CSAG1Q6PB30 78 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 UNQ5815/PRO19632Q6UWF5 114 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 LYPD5Q6UWN5 251 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 SH2D6Q7Z4S9 175 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 BET1LQ9NYM9 111 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 LINC00474Q9P2X8 69 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 SHROOM3Q8TF72 1996 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 LAMB1P07942 1786 aa2.17□□□□□ -2.06
SKP1-209ENST00000522552 COL2A1P02458 1487 aaPredicted RBP2.16□□□□□ -2.06
SKP1-209ENST00000522552 IFT140Q96RY7 1462 aa2.16□□□□□ -2.06
SKP1-209ENST00000522552 PCDH15Q96QU1 1955 aa2.16□□□□□ -2.06
SKP1-209ENST00000522552 hADV29S1A0JD25 119 aa2.16□□□□□ -2.06
SKP1-209ENST00000522552 CCL16O15467 120 aa2.16□□□□□ -2.06
SKP1-209ENST00000522552 LINC00052Q96N35 136 aa2.16□□□□□ -2.06
SKP1-209ENST00000522552 PMCHL2Q9BQD1 86 aa2.16□□□□□ -2.06
SKP1-209ENST00000522552 MRPL35Q9NZE8 188 aaKnown RBP2.16□□□□□ -2.06
SKP1-209ENST00000522552 FN1P02751 2386 aaKnown RBP2.16□□□□□ -2.06
SKP1-209ENST00000522552 ARAP2Q8WZ64 1704 aa2.16□□□□□ -2.06
SKP1-209ENST00000522552 ESPL1Q14674 2120 aa2.16□□□□□ -2.06
SKP1-209ENST00000522552 ANKRD36BQ8N2N9 1353 aa2.16□□□□□ -2.06
SKP1-209ENST00000522552 MED13Q9UHV7 2174 aa2.16□□□□□ -2.06
SKP1-209ENST00000522552 SBF2Q86WG5 1849 aa2.16□□□□□ -2.06
SKP1-209ENST00000522552 COL16A1Q07092 1604 aaPredicted RBP2.16□□□□□ -2.06
SKP1-209ENST00000522552 ADAMTS7Q9UKP4 1686 aa2.16□□□□□ -2.06
SKP1-209ENST00000522552 TRBV6-8A0A0A6YYG3 113 aa2.15□□□□□ -2.06
SKP1-209ENST00000522552 TMEM30CPA0ZSE6 113 aa2.15□□□□□ -2.06
SKP1-209ENST00000522552 C10orf82Q8WW14 230 aa2.15□□□□□ -2.06
SKP1-209ENST00000522552 PATE1Q8WXA2 126 aa2.15□□□□□ -2.06
SKP1-209ENST00000522552 ORMDL1Q9P0S3 153 aa2.15□□□□□ -2.06
SKP1-209ENST00000522552 LTBP2Q14767 1821 aa2.15□□□□□ -2.06
SKP1-209ENST00000522552 PATJQ8NI35 1801 aa2.15□□□□□ -2.06
SKP1-209ENST00000522552 MYO18AQ92614 2054 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms