RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SIGLEC9Q9Y336 463 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 PLXNB1O43157 2135 aa2.09□□□□□ -2.08
HMGB1P41-201ENST00000520234 ARFGEF3Q5TH69 2177 aa2.09□□□□□ -2.08
HMGB1P41-201ENST00000520234 FAM186AA6NE01 2351 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGLV3-9A0A075B6K5 115 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 TRBV25-1A0A075B6N4 114 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGKV1D-17A0A075B6S4 117 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGKV1OR2-108A0A075B7D4 117 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 TRAV17A0A0B4J275 112 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 A0A1B0GX51 115 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 HIGD1CA8MV81 97 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 A8MWL6 223 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 SPINK4O60575 86 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 LTAP01374 205 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 CD7P09564 240 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 CECR9P0C854 216 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 EVI2AP22794 236 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 GLRXP35754 106 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 UBE2D1P51668 147 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 EDDM3BP56851 147 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 HERVK_113P61574 105 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 RPS28P62857 69 aaKnown RBP2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 HBBP68871 147 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 LOXL1Q08397 574 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 C12orf74Q32Q52 190 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 LINC00322Q6ZN03 302 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZNF493Q6ZR52 646 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 MIR17HGQ75NE6 70 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 TEN1Q86WV5 123 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 RPRMLQ8N4K4 120 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 PPDPFLQ8WWR9 84 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 BAALCQ8WXS3 180 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 AP1S3Q96PC3 154 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 ODF3Q96PU9 254 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 ANAPC13Q9BS18 74 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 HINT2Q9BX68 163 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 IFI27L2Q9H2X8 130 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 VCX2Q9H322 139 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 TMEM167BQ9NRX6 74 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZNF355PQ9NSJ1 428 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 PRNDQ9UKY0 176 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 SLC25A15Q9Y619 301 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 DSCAMO60469 2012 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZGRF1Q86YA3 2104 aa2.08□□□□□ -2.08
HMGB1P41-201ENST00000520234 DNAH14Q0VDD8 3507 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 RANBP2P49792 3224 aaKnown RBP2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGHV1-18A0A0C4DH31 117 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 TRBV6-1A0A0K0K1D8 114 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 TMEM262E9PQX1 116 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 UPK2O00526 184 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 NBR2O15453 112 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 CD24P25063 80 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 ASIPP42127 132 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 PI4KAP42356 2102 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 NMUP48645 174 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 FABP6P51161 128 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZNF138P52744 262 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 TAS2R45P59539 299 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 KLRB1Q12918 225 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 PSG5Q15238 335 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 TEX36Q5VZQ5 186 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZFAND6Q6FIF0 208 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 AMTNQ6UX39 209 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 SDIM1Q6ZPB5 146 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZNF826PQ6ZT77 177 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 SLC25A48Q6ZT89 311 aaKnown RBP2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 LINC00311Q8N616 119 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 OR1L8Q8NGR8 309 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 RAB37Q96AX2 223 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 FXYD5Q96DB9 178 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 CHAC1Q9BUX1 264 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 SLC25A2Q9BXI2 301 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 TMEM126AQ9H061 195 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 PRR14LQ5THK1 2151 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 USP34Q70CQ2 3546 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 CEP290O15078 2479 aa2.07□□□□□ -2.08
HMGB1P41-201ENST00000520234 LAMA3Q16787 3333 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 CDH23Q9H251 3354 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 PLCE1Q9P212 2302 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 TRAV4A0A0B4J268 109 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGHV3-64DA0A0J9YX35 117 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 TRBV7-7A0A0K0K1E9 115 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 TEX50A0A1B0GTY4 177 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 SMIM9A6NGZ8 99 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 DEFB108AA8MXU0 73 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 M0R2P5 195 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 PEX7O00628 323 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 TIMM8AO60220 97 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 FCN3O75636 299 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 LYZL6O75951 148 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 ATP5LO75964 103 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 CNIH1O95406 144 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 APOMO95445 188 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 MOSP00540 346 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 CRYGBP07316 175 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZNF688P0C7X2 276 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 CSN1S1P47710 185 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZNF137PP52743 207 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 PRCDQ00LT1 54 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms