RNA–Protein interactions for RNA: ENST00000519938.5

IKBKB-213, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 2,403 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-213ENST00000519938 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.25□□□□□ -0.294e-11■■■■■ 37.2
IKBKB-213ENST00000519938 TRAV12-1A0A0B4J245 112 aa13.24□□□□□ -0.29
IKBKB-213ENST00000519938 PLNP26678 52 aa13.24□□□□□ -0.29
IKBKB-213ENST00000519938 RPL39LQ96EH5 51 aaKnown RBP13.24□□□□□ -0.29
IKBKB-213ENST00000519938 TRAV8-6A0A0B4J262 113 aa13.23□□□□□ -0.29
IKBKB-213ENST00000519938 C10orf99Q6UWK7 81 aa13.23□□□□□ -0.29
IKBKB-213ENST00000519938 ODF3Q96PU9 254 aa13.23□□□□□ -0.29
IKBKB-213ENST00000519938 SCGB3A1Q96QR1 104 aa13.23□□□□□ -0.29
IKBKB-213ENST00000519938 H7C1H1 209 aa13.23□□□□□ -0.29
IKBKB-213ENST00000519938 USP9XQ93008 2570 aaPredicted RBP13.23□□□□□ -0.29
IKBKB-213ENST00000519938 IGSF10Q6WRI0 2623 aa13.22□□□□□ -0.29
IKBKB-213ENST00000519938 C9orf118A6NHY6 69 aa13.22□□□□□ -0.29
IKBKB-213ENST00000519938 COX6B1P14854 86 aa13.22□□□□□ -0.29
IKBKB-213ENST00000519938 SNRPD3P62318 126 aaKnown RBP13.22□□□□□ -0.29
IKBKB-213ENST00000519938 KIF25-AS1Q9Y6Z4 181 aa13.22□□□□□ -0.29
IKBKB-213ENST00000519938 FLNCQ14315 2725 aa13.21□□□□□ -0.29
IKBKB-213ENST00000519938 RNF223E7ERA6 249 aa13.21□□□□□ -0.29
IKBKB-213ENST00000519938 VPREB3Q9UKI3 123 aa13.21□□□□□ -0.29
IKBKB-213ENST00000519938 F8VRH5 84 aa13.21□□□□□ -0.3
IKBKB-213ENST00000519938 IGHV4OR15-8A0A075B7B6 117 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 A0A087WW49 117 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 TRAV12-3A0A0B4J271 114 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 ELANEP08246 267 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 ZNF688P0C7X2 276 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 LINC00315P59091 139 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 TTTY13Q9BZ97 58 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 TRBV25-1A0A075B6N4 114 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 LGALS9O00182 355 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 LGALS1P09382 135 aaKnown RBP13.2□□□□□ -0.3
IKBKB-213ENST00000519938 CD7P09564 240 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 RPL32P62910 135 aaKnown RBP13.2□□□□□ -0.3
IKBKB-213ENST00000519938 CHAC1Q9BUX1 264 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 CSTL1Q9H114 145 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 CSPG4Q6UVK1 2322 aa13.2□□□□□ -0.3
IKBKB-213ENST00000519938 A0A0J9YX75 114 aa13.19□□□□□ -0.3
IKBKB-213ENST00000519938 K7EQG2 157 aa13.19□□□□□ -0.3
IKBKB-213ENST00000519938 C2orf66Q6UXQ4 117 aa13.19□□□□□ -0.3
IKBKB-213ENST00000519938 Q6YL49 198 aa13.19□□□□□ -0.3
IKBKB-213ENST00000519938 NEXN-AS1Q8NBZ9 246 aa13.19□□□□□ -0.3
IKBKB-213ENST00000519938 MAPK1IP1LQ8NDC0 245 aa13.19□□□□□ -0.3
IKBKB-213ENST00000519938 WFDC12Q8WWY7 111 aa13.19□□□□□ -0.3
IKBKB-213ENST00000519938 CBY1Q9Y3M2 126 aa13.19□□□□□ -0.3
IKBKB-213ENST00000519938 CHTOPQ9Y3Y2 248 aaKnown RBP13.19□□□□□ -0.3
IKBKB-213ENST00000519938 FSHBP01225 129 aa13.18□□□□□ -0.3
IKBKB-213ENST00000519938 SYNJ2BPP57105 145 aa13.18□□□□□ -0.3
IKBKB-213ENST00000519938 RNASE8Q8TDE3 154 aaKnown RBP13.18□□□□□ -0.3
IKBKB-213ENST00000519938 GAGE10A6NGK3 116 aa13.17□□□□□ -0.3
IKBKB-213ENST00000519938 UBE2E2Q96LR5 201 aa13.17□□□□□ -0.3
IKBKB-213ENST00000519938 LINC01549A6NIU2 74 aa13.17□□□□□ -0.3
IKBKB-213ENST00000519938 GCSHP23434 173 aa13.17□□□□□ -0.3
IKBKB-213ENST00000519938 GTF2H5Q6ZYL4 71 aa13.17□□□□□ -0.3
IKBKB-213ENST00000519938 H3BUT2 72 aa13.16□□□□□ -0.3
IKBKB-213ENST00000519938 SMIM13P0DJ93 91 aa13.16□□□□□ -0.3
IKBKB-213ENST00000519938 ZNF702PQ9H963 129 aa13.16□□□□□ -0.3
IKBKB-213ENST00000519938 MUC4Q99102 2169 aa13.16□□□□□ -0.3
IKBKB-213ENST00000519938 CELSR2Q9HCU4 2923 aa13.16□□□□□ -0.3
IKBKB-213ENST00000519938 MAP1AP78559 2803 aaPredicted RBP13.16□□□□□ -0.3
IKBKB-213ENST00000519938 BAALCQ8WXS3 180 aa13.15□□□□□ -0.3
IKBKB-213ENST00000519938 C9orf85Q96MD7 179 aa13.15□□□□□ -0.3
IKBKB-213ENST00000519938 IGHV3-16A0A0C4DH30 117 aa13.15□□□□□ -0.3
IKBKB-213ENST00000519938 DUSP14O95147 198 aaKnown RBP13.15□□□□□ -0.3
IKBKB-213ENST00000519938 PRB1P04280 392 aa13.15□□□□□ -0.3
IKBKB-213ENST00000519938 IGHV4-31P0DP07 118 aa13.15□□□□□ -0.3
IKBKB-213ENST00000519938 CDKN1BP46527 198 aa13.15□□□□□ -0.3
IKBKB-213ENST00000519938 SUMO4Q6EEV6 95 aa13.15□□□□□ -0.3
IKBKB-213ENST00000519938 MAPKAPK5-AS1Q8N8E1 139 aa13.15□□□□□ -0.3
IKBKB-213ENST00000519938 JPT2Q9H910 190 aa13.15□□□□□ -0.3
IKBKB-213ENST00000519938 VCYO14598 125 aa13.14□□□□□ -0.31
IKBKB-213ENST00000519938 HOXD3P31249 432 aaPredicted RBP13.14□□□□□ -0.31
IKBKB-213ENST00000519938 POLR2KP53803 58 aaKnown RBP13.14□□□□□ -0.31
IKBKB-213ENST00000519938 RNF152Q8N8N0 203 aa13.14□□□□□ -0.31
IKBKB-213ENST00000519938 RAB37Q96AX2 223 aa13.14□□□□□ -0.31
IKBKB-213ENST00000519938 TM2D2Q9BX73 214 aa13.14□□□□□ -0.31
IKBKB-213ENST00000519938 F5H697 171 aa13.14□□□□□ -0.31
IKBKB-213ENST00000519938 IGKV3-20P01619 116 aa13.14□□□□□ -0.31
IKBKB-213ENST00000519938 SYT8Q8NBV8 401 aa13.14□□□□□ -0.31
IKBKB-213ENST00000519938 CYSLTR1Q9Y271 337 aa13.14□□□□□ -0.31
IKBKB-213ENST00000519938 TRAV12-2A0A075B6T6 113 aa13.13□□□□□ -0.31
IKBKB-213ENST00000519938 A0A087WWL8 130 aa13.13□□□□□ -0.31
IKBKB-213ENST00000519938 GAGE12BA1L429 117 aa13.13□□□□□ -0.31
IKBKB-213ENST00000519938 FXYD2P54710 66 aa13.13□□□□□ -0.31
IKBKB-213ENST00000519938 TAL2Q16559 108 aa13.13□□□□□ -0.31
IKBKB-213ENST00000519938 CEND1Q8N111 149 aa13.13□□□□□ -0.31
IKBKB-213ENST00000519938 PRSS29PA6NIE9 313 aa13.13□□□□□ -0.31
IKBKB-213ENST00000519938 UFSP1Q6NVU6 142 aa13.13□□□□□ -0.31
IKBKB-213ENST00000519938 JMJD8Q96S16 334 aa13.13□□□□□ -0.31
IKBKB-213ENST00000519938 KIR2DL4Q99706 377 aa13.13□□□□□ -0.31
IKBKB-213ENST00000519938 IGHV1OR15-1A0A075B7D0 117 aa13.12□□□□□ -0.31
IKBKB-213ENST00000519938 HOXA3O43365 443 aaPredicted RBP13.12□□□□□ -0.31
IKBKB-213ENST00000519938 CST9LQ9H4G1 147 aa13.12□□□□□ -0.31
IKBKB-213ENST00000519938 MDFICQ9P1T7 246 aa13.12□□□□□ -0.31
IKBKB-213ENST00000519938 MYO18BQ8IUG5 2567 aa13.12□□□□□ -0.31
IKBKB-213ENST00000519938 ACACBO00763 2458 aa13.12□□□□□ -0.31
IKBKB-213ENST00000519938 OR11H12B2RN74 326 aa13.12□□□□□ -0.31
IKBKB-213ENST00000519938 FOXI2Q6ZQN5 318 aa13.12□□□□□ -0.31
IKBKB-213ENST00000519938 NEGR1Q7Z3B1 354 aa13.12□□□□□ -0.31
IKBKB-213ENST00000519938 Q8N1Y9 231 aa13.12□□□□□ -0.31
IKBKB-213ENST00000519938 OR11H1Q8NG94 326 aa13.12□□□□□ -0.31
IKBKB-213ENST00000519938 OR11H2Q8NH07 326 aa13.12□□□□□ -0.31
IKBKB-213ENST00000519938 BEX4Q9NWD9 120 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms