RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 GATA1P15976 413 aaPredicted RBP8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 HIVEP2P31629 2446 aa8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 HIVEP3Q5T1R4 2406 aa8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 TRBV6-1A0A0K0K1D8 114 aa8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 LINC01548A6NM66 108 aa8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 SPRY2O43597 315 aa8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 HTN3P15516 51 aa8.72□□□□□ -1.01
PCDHGB4-201ENST00000519479 C19orf84I3L1E1 186 aa8.71□□□□□ -1.01
PCDHGB4-201ENST00000519479 VCYO14598 125 aa8.71□□□□□ -1.01
PCDHGB4-201ENST00000519479 IGHV4-59P01825 116 aa8.71□□□□□ -1.01
PCDHGB4-201ENST00000519479 DLX4Q92988 240 aaPredicted RBP8.71□□□□□ -1.01
PCDHGB4-201ENST00000519479 IGHV3-73A0A0B4J1V6 119 aa8.71□□□□□ -1.01
PCDHGB4-201ENST00000519479 MRPL53Q96EL3 112 aaKnown RBP8.71□□□□□ -1.01
PCDHGB4-201ENST00000519479 SPINK13Q1W4C9 94 aa8.71□□□□□ -1.02
PCDHGB4-201ENST00000519479 TRAV8-4A0A0B4J246 113 aa8.71□□□□□ -1.02
PCDHGB4-201ENST00000519479 C11orf71Q6IPW1 123 aa8.71□□□□□ -1.02
PCDHGB4-201ENST00000519479 CHAC1Q9BUX1 264 aa8.71□□□□□ -1.02
PCDHGB4-201ENST00000519479 BOD1L1Q8NFC6 3051 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 SAP30O75446 220 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 DEFB112Q30KQ8 113 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 DKK2Q9UBU2 259 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 H3BUA1 57 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 NSUN5P1Q3KNT7 163 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 STHQ8IWL8 128 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 NRGNQ92686 78 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 FRYQ5TBA9 3013 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 ZNF876PQ49A33 203 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 DEFB121Q5J5C9 76 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 C2orf66Q6UXQ4 117 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 DEFB125Q8N687 156 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 TRAV12-2A0A075B6T6 113 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 DEFB131AP59861 70 aa8.7□□□□□ -1.02
PCDHGB4-201ENST00000519479 LINC01549A6NIU2 74 aa8.69□□□□□ -1.02
PCDHGB4-201ENST00000519479 PLA2G2AP14555 144 aa8.69□□□□□ -1.02
PCDHGB4-201ENST00000519479 SMIM2Q9BVW6 85 aa8.69□□□□□ -1.02
PCDHGB4-201ENST00000519479 C2orf70A6NJV1 201 aa8.69□□□□□ -1.02
PCDHGB4-201ENST00000519479 KLHL30-AS1Q8NEE0 82 aa8.69□□□□□ -1.02
PCDHGB4-201ENST00000519479 KLK9Q9UKQ9 250 aa8.69□□□□□ -1.02
PCDHGB4-201ENST00000519479 C16orf54Q6UWD8 224 aa8.69□□□□□ -1.02
PCDHGB4-201ENST00000519479 CCDC140Q96MF4 163 aa8.69□□□□□ -1.02
PCDHGB4-201ENST00000519479 PGPEP1Q9NXJ5 209 aa8.69□□□□□ -1.02
PCDHGB4-201ENST00000519479 MRPL35Q9NZE8 188 aaKnown RBP8.69□□□□□ -1.02
PCDHGB4-201ENST00000519479 LENEPQ9Y5L5 61 aa8.69□□□□□ -1.02
PCDHGB4-201ENST00000519479 USP9YO00507 2555 aaPredicted RBP8.69□□□□□ -1.02
PCDHGB4-201ENST00000519479 A0A1W2PPM0 123 aa8.68□□□□□ -1.02
PCDHGB4-201ENST00000519479 GNRH2O43555 120 aa8.68□□□□□ -1.02
PCDHGB4-201ENST00000519479 CIRBPQ14011 172 aaKnown RBP8.68□□□□□ -1.02
PCDHGB4-201ENST00000519479 AJUBAQ96IF1 538 aa8.68□□□□□ -1.02
PCDHGB4-201ENST00000519479 ZNF80P51504 273 aaPredicted RBP8.68□□□□□ -1.02
PCDHGB4-201ENST00000519479 LINC01545Q5VT33 79 aa8.68□□□□□ -1.02
PCDHGB4-201ENST00000519479 NEGR1Q7Z3B1 354 aa8.68□□□□□ -1.02
PCDHGB4-201ENST00000519479 IGHV3-64A0A075B6Q5 118 aa8.68□□□□□ -1.02
PCDHGB4-201ENST00000519479 CD28P10747 220 aa8.68□□□□□ -1.02
PCDHGB4-201ENST00000519479 EBI3Q14213 229 aa8.68□□□□□ -1.02
PCDHGB4-201ENST00000519479 CITED1Q99966 193 aa8.68□□□□□ -1.02
PCDHGB4-201ENST00000519479 ZFHX4Q86UP3 3567 aa8.67□□□□□ -1.02
PCDHGB4-201ENST00000519479 IGKV3OR2-268A0A0C4DH90 116 aa8.67□□□□□ -1.02
PCDHGB4-201ENST00000519479 CTRLP40313 264 aa8.67□□□□□ -1.02
PCDHGB4-201ENST00000519479 DEFB1P60022 68 aa8.67□□□□□ -1.02
PCDHGB4-201ENST00000519479 TRGV2A0A075B6R0 118 aa8.67□□□□□ -1.02
PCDHGB4-201ENST00000519479 UNQ9165/PRO28630Q6UXU0 137 aa8.67□□□□□ -1.02
PCDHGB4-201ENST00000519479 TRBV12-3P01733 135 aa8.67□□□□□ -1.02
PCDHGB4-201ENST00000519479 LOXL1Q08397 574 aaPredicted RBP8.67□□□□□ -1.02
PCDHGB4-201ENST00000519479 TCTEX1D4Q5JR98 221 aa8.67□□□□□ -1.02
PCDHGB4-201ENST00000519479 TET2Q6N021 2002 aaPredicted RBP8.67□□□□□ -1.02
PCDHGB4-201ENST00000519479 IGLV2-11P01706 119 aa8.66□□□□□ -1.02
PCDHGB4-201ENST00000519479 TP53TG1Q9Y2A0 90 aa8.66□□□□□ -1.02
PCDHGB4-201ENST00000519479 F8W1H4 67 aa8.66□□□□□ -1.02
PCDHGB4-201ENST00000519479 DNAL4O96015 105 aa8.66□□□□□ -1.02
PCDHGB4-201ENST00000519479 CRIP1P50238 77 aa8.66□□□□□ -1.02
PCDHGB4-201ENST00000519479 RNF114Q9Y508 228 aa8.66□□□□□ -1.02
PCDHGB4-201ENST00000519479 USP9XQ93008 2570 aaPredicted RBP8.66□□□□□ -1.02
PCDHGB4-201ENST00000519479 SDHAF1A6NFY7 115 aa8.66□□□□□ -1.02
PCDHGB4-201ENST00000519479 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
PCDHGB4-201ENST00000519479 SORL1Q92673 2214 aa8.66□□□□□ -1.02
PCDHGB4-201ENST00000519479 IGHV1OR15-1A0A075B7D0 117 aa8.65□□□□□ -1.02
PCDHGB4-201ENST00000519479 TRAV2A0A0B4J234 112 aa8.65□□□□□ -1.02
PCDHGB4-201ENST00000519479 ANKRD39Q53RE8 183 aa8.65□□□□□ -1.02
PCDHGB4-201ENST00000519479 IGHG2P01859 326 aa8.65□□□□□ -1.02
PCDHGB4-201ENST00000519479 LINC00310P59036 64 aa8.65□□□□□ -1.02
PCDHGB4-201ENST00000519479 MEIG1Q5JSS6 88 aa8.65□□□□□ -1.02
PCDHGB4-201ENST00000519479 C9orf47Q6ZRZ4 202 aa8.65□□□□□ -1.02
PCDHGB4-201ENST00000519479 TEX48A0A1B0GUV7 120 aa8.65□□□□□ -1.03
PCDHGB4-201ENST00000519479 KNCNA6PVL3 124 aa8.65□□□□□ -1.03
PCDHGB4-201ENST00000519479 ZNF493Q6ZR52 646 aa8.65□□□□□ -1.03
PCDHGB4-201ENST00000519479 PCP2Q8IVA1 136 aa8.65□□□□□ -1.03
PCDHGB4-201ENST00000519479 MGAQ8IWI9 3026 aa8.65□□□□□ -1.03
PCDHGB4-201ENST00000519479 TLN2Q9Y4G6 2542 aa8.65□□□□□ -1.03
PCDHGB4-201ENST00000519479 IGKV3D-20A0A0C4DH25 116 aa8.64□□□□□ -1.03
PCDHGB4-201ENST00000519479 CMC4P56277 68 aaPredicted RBP8.64□□□□□ -1.03
PCDHGB4-201ENST00000519479 ZNF415Q09FC8 603 aa8.64□□□□□ -1.03
PCDHGB4-201ENST00000519479 VWC2LB2RUY7 222 aa8.64□□□□□ -1.03
PCDHGB4-201ENST00000519479 ELANEP08246 267 aa8.64□□□□□ -1.03
PCDHGB4-201ENST00000519479 H3BMG7 143 aa8.64□□□□□ -1.03
PCDHGB4-201ENST00000519479 C20orf78Q9BR46 151 aa8.64□□□□□ -1.03
PCDHGB4-201ENST00000519479 VPREB3Q9UKI3 123 aa8.64□□□□□ -1.03
PCDHGB4-201ENST00000519479 F8VRH5 84 aa8.64□□□□□ -1.03
PCDHGB4-201ENST00000519479 Q8N6K4 173 aa8.64□□□□□ -1.03
PCDHGB4-201ENST00000519479 UBE2E2Q96LR5 201 aa8.64□□□□□ -1.03
PCDHGB4-201ENST00000519479 ABCA2Q9BZC7 2435 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms