RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 DEFB131AP59861 70 aa19.72■□□□□ 0.75
COL13A1-210ENST00000517713 SPINK13Q1W4C9 94 aa19.72■□□□□ 0.75
COL13A1-210ENST00000517713 DEFB114Q30KQ6 69 aa19.72■□□□□ 0.75
COL13A1-210ENST00000517713 OR2K2Q8NGT1 345 aa19.72■□□□□ 0.75
COL13A1-210ENST00000517713 FHL3Q13643 280 aa19.71■□□□□ 0.75
COL13A1-210ENST00000517713 CITED2Q99967 270 aaPredicted RBP19.71■□□□□ 0.75
COL13A1-210ENST00000517713 CCL24O00175 119 aa19.71■□□□□ 0.75
COL13A1-210ENST00000517713 CTAG1AP78358 180 aa19.71■□□□□ 0.75
COL13A1-210ENST00000517713 SPATA45Q537H7 98 aa19.71■□□□□ 0.75
COL13A1-210ENST00000517713 AMTNQ6UX39 209 aa19.71■□□□□ 0.75
COL13A1-210ENST00000517713 TSSC4Q9Y5U2 329 aaPredicted RBP19.71■□□□□ 0.75
COL13A1-210ENST00000517713 TRAV26-2A0A0B4J265 109 aa19.7■□□□□ 0.74
COL13A1-210ENST00000517713 ZNF747Q9BV97 191 aa19.7■□□□□ 0.74
COL13A1-210ENST00000517713 NXT2Q9NPJ8 142 aaKnown RBP19.7■□□□□ 0.74
COL13A1-210ENST00000517713 ACANP16112 2415 aa19.7■□□□□ 0.74
COL13A1-210ENST00000517713 KNCNA6PVL3 124 aa19.69■□□□□ 0.74
COL13A1-210ENST00000517713 CD7P09564 240 aa19.69■□□□□ 0.74
COL13A1-210ENST00000517713 MRAP2Q96G30 205 aa19.69■□□□□ 0.74
COL13A1-210ENST00000517713 ANK3Q12955 4377 aaKnown RBP19.69■□□□□ 0.74
COL13A1-210ENST00000517713 C20orf202A1L168 122 aa19.69■□□□□ 0.74
COL13A1-210ENST00000517713 LINC01546A6NGU7 62 aa19.69■□□□□ 0.74
COL13A1-210ENST00000517713 PET117Q6UWS5 81 aa19.69■□□□□ 0.74
COL13A1-210ENST00000517713 NRACQ8N912 160 aa19.69■□□□□ 0.74
COL13A1-210ENST00000517713 DPH3P1Q9H4G8 78 aa19.69■□□□□ 0.74
COL13A1-210ENST00000517713 NXPH4O95158 308 aa19.68■□□□□ 0.74
COL13A1-210ENST00000517713 LY6G6DO95868 133 aa19.68■□□□□ 0.74
COL13A1-210ENST00000517713 HBDP02042 147 aa19.68■□□□□ 0.74
COL13A1-210ENST00000517713 C14orf178Q8N769 122 aaPredicted RBP19.68■□□□□ 0.74
COL13A1-210ENST00000517713 CUBNO60494 3623 aa19.67■□□□□ 0.74
COL13A1-210ENST00000517713 FXYD7P58549 80 aa19.67■□□□□ 0.74
COL13A1-210ENST00000517713 CD300EQ496F6 205 aaPredicted RBP19.67■□□□□ 0.74
COL13A1-210ENST00000517713 HLA-DRB4P13762 266 aa19.66■□□□□ 0.74
COL13A1-210ENST00000517713 ZNF705AQ6ZN79 300 aaPredicted RBP19.66■□□□□ 0.74
COL13A1-210ENST00000517713 MIEN1Q9BRT3 115 aa19.66■□□□□ 0.74
COL13A1-210ENST00000517713 HLA-DRB4X5D2U9 266 aa19.66■□□□□ 0.74
COL13A1-210ENST00000517713 FASNP49327 2511 aaKnown RBP19.66■□□□□ 0.74
COL13A1-210ENST00000517713 OR4C46A6NHA9 309 aa19.66■□□□□ 0.74
COL13A1-210ENST00000517713 PRSS47A8MTI9 375 aa19.66■□□□□ 0.74
COL13A1-210ENST00000517713 Q8N8P6 123 aa19.66■□□□□ 0.74
COL13A1-210ENST00000517713 AP1S3Q96PC3 154 aa19.66■□□□□ 0.74
COL13A1-210ENST00000517713 TRAV9-2A0A087WT02 112 aa19.65■□□□□ 0.74
COL13A1-210ENST00000517713 MAJINQ3KP22 176 aa19.65■□□□□ 0.74
COL13A1-210ENST00000517713 A8MTW9 85 aa19.64■□□□□ 0.74
COL13A1-210ENST00000517713 H0Y8G0 127 aa19.64■□□□□ 0.74
COL13A1-210ENST00000517713 H3BMM0 161 aa19.64■□□□□ 0.74
COL13A1-210ENST00000517713 DEFB125Q8N687 156 aa19.64■□□□□ 0.74
COL13A1-210ENST00000517713 AGRNO00468 2067 aa19.64■□□□□ 0.73
COL13A1-210ENST00000517713 IGHV1OR15-1A0A075B7D0 117 aa19.64■□□□□ 0.73
COL13A1-210ENST00000517713 SPAG8Q99932 426 aaPredicted RBP19.64■□□□□ 0.73
COL13A1-210ENST00000517713 MAP6D1Q9H9H5 199 aa19.64■□□□□ 0.73
COL13A1-210ENST00000517713 IGLV2-18A0A075B6J9 118 aa19.63■□□□□ 0.73
COL13A1-210ENST00000517713 IGHV3-16A0A0C4DH30 117 aa19.63■□□□□ 0.73
COL13A1-210ENST00000517713 NDUFA7O95182 113 aa19.63■□□□□ 0.73
COL13A1-210ENST00000517713 JMJD8Q96S16 334 aa19.63■□□□□ 0.73
COL13A1-210ENST00000517713 ZNF124Q15973 351 aa19.63■□□□□ 0.73
COL13A1-210ENST00000517713 Q8N1Y9 231 aa19.62■□□□□ 0.73
COL13A1-210ENST00000517713 C9orf85Q96MD7 179 aa19.62■□□□□ 0.73
COL13A1-210ENST00000517713 TRAV25A0A0B4J276 109 aa19.61■□□□□ 0.73
COL13A1-210ENST00000517713 MGPP08493 103 aa19.61■□□□□ 0.73
COL13A1-210ENST00000517713 LINC01545Q5VT33 79 aa19.61■□□□□ 0.73
COL13A1-210ENST00000517713 MCRIP2Q9BUT9 160 aaKnown RBP19.61■□□□□ 0.73
COL13A1-210ENST00000517713 ZNF256Q9Y2P7 627 aaPredicted RBP19.61■□□□□ 0.73
COL13A1-210ENST00000517713 MDFICQ9P1T7 246 aa19.61■□□□□ 0.73
COL13A1-210ENST00000517713 FCER1GP30273 86 aa19.6■□□□□ 0.73
COL13A1-210ENST00000517713 NF1P21359 2839 aa19.6■□□□□ 0.73
COL13A1-210ENST00000517713 MUC4Q99102 2169 aa19.6■□□□□ 0.73
COL13A1-210ENST00000517713 RBMY1BA6NDE4 496 aaKnown RBP19.59■□□□□ 0.73
COL13A1-210ENST00000517713 RBMY1EA6NEQ0 496 aaKnown RBP19.59■□□□□ 0.73
COL13A1-210ENST00000517713 RBMY1DP0C7P1 496 aaKnown RBP19.59■□□□□ 0.73
COL13A1-210ENST00000517713 RASL10AQ92737 203 aa19.59■□□□□ 0.73
COL13A1-210ENST00000517713 KIF25-AS1Q9Y6Z4 181 aa19.59■□□□□ 0.73
COL13A1-210ENST00000517713 SMIM17P0DL12 118 aa19.58■□□□□ 0.73
COL13A1-210ENST00000517713 IGLC3P0DOY3 106 aa19.58■□□□□ 0.73
COL13A1-210ENST00000517713 POM121L12Q8N7R1 296 aa19.58■□□□□ 0.73
COL13A1-210ENST00000517713 HECTD1Q9ULT8 2610 aa19.58■□□□□ 0.72
COL13A1-210ENST00000517713 IGLL1P15814 213 aa19.58■□□□□ 0.72
COL13A1-210ENST00000517713 PROK1P58294 105 aa19.57■□□□□ 0.72
COL13A1-210ENST00000517713 IFI27L1Q96BM0 104 aa19.57■□□□□ 0.72
COL13A1-210ENST00000517713 SORL1Q92673 2214 aa19.57■□□□□ 0.72
COL13A1-210ENST00000517713 RBMY1A1P0DJD3 496 aaKnown RBP19.56■□□□□ 0.72
COL13A1-210ENST00000517713 RBMY1CP0DJD4 496 aa19.56■□□□□ 0.72
COL13A1-210ENST00000517713 RBMY1FQ15415 496 aaKnown RBP19.56■□□□□ 0.72
COL13A1-210ENST00000517713 JPT2Q9H910 190 aa19.56■□□□□ 0.72
COL13A1-210ENST00000517713 LINC00315P59091 139 aa19.56■□□□□ 0.72
COL13A1-210ENST00000517713 PMCHL2Q9BQD1 86 aa19.56■□□□□ 0.72
COL13A1-210ENST00000517713 UQCR10Q9UDW1 63 aa19.56■□□□□ 0.72
COL13A1-210ENST00000517713 TRGV11A0A075B6L2 103 aa19.55■□□□□ 0.72
COL13A1-210ENST00000517713 LAGE3Q14657 143 aa19.55■□□□□ 0.72
COL13A1-210ENST00000517713 SYT8Q8NBV8 401 aa19.55■□□□□ 0.72
COL13A1-210ENST00000517713 TMEM158Q8WZ71 300 aa19.55■□□□□ 0.72
COL13A1-210ENST00000517713 RPL39LQ96EH5 51 aaKnown RBP19.55■□□□□ 0.72
COL13A1-210ENST00000517713 C20orf78Q9BR46 151 aa19.55■□□□□ 0.72
COL13A1-210ENST00000517713 SMIM2Q9BVW6 85 aa19.55■□□□□ 0.72
COL13A1-210ENST00000517713 SUMO2P61956 95 aaKnown RBP19.54■□□□□ 0.72
COL13A1-210ENST00000517713 hDV102S1A0JD36 115 aa19.53■□□□□ 0.72
COL13A1-210ENST00000517713 CBY3A6NI87 242 aa19.53■□□□□ 0.72
COL13A1-210ENST00000517713 TCAPO15273 167 aa19.53■□□□□ 0.72
COL13A1-210ENST00000517713 PPP1R17O96001 155 aa19.53■□□□□ 0.72
COL13A1-210ENST00000517713 A0A087WWL8 130 aa19.52■□□□□ 0.72
COL13A1-210ENST00000517713 ADARB2-AS1A8MUL3 147 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms