RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 TRDV1A0A1B0GX56 115 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 SULT1C4O75897 302 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 SAA1P0DJI8 122 aaPredicted RBP0.29□□□□□ -2.36
SKP1-203ENST00000517625 BCL2P10415 239 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 SPINT3P49223 89 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 NDUFA6P56556 154 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 TRIQKQ629K1 86 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 DCUN1D2Q6PH85 259 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 IZUMO2Q6UXV1 221 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 CASC2Q6XLA1 102 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 OR5AK2Q8NH90 309 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 CDC26Q8NHZ8 85 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 PLAC4Q8WY50 150 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 CARD19Q96LW7 228 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 CCL19Q99731 98 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 PRO3102Q9H379 93 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 ATPIF1Q9UII2 106 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 CITO14578 2027 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 DYNC1H1Q14204 4646 aaKnown RBP0.29□□□□□ -2.36
SKP1-203ENST00000517625 HEATR1Q9H583 2144 aaKnown RBP0.29□□□□□ -2.36
SKP1-203ENST00000517625 DIP2AQ14689 1571 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 LAMC3Q9Y6N6 1575 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 KIF21BO75037 1637 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 ADGBQ8N7X0 1667 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 MAP1LC3B2A6NCE7 125 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 NUPR2A6NF83 97 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 GYPBP06028 91 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 TPT1P13693 172 aaKnown RBP0.28□□□□□ -2.36
SKP1-203ENST00000517625 KDELR1P24390 212 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 SRP9P49458 86 aaKnown RBP0.28□□□□□ -2.36
SKP1-203ENST00000517625 CRYBA4P53673 196 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 CAV3P56539 151 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 RPL37AP61513 92 aaKnown RBP0.28□□□□□ -2.36
SKP1-203ENST00000517625 C6orf52Q5T4I8 152 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 TMEM78Q5T7P6 136 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 ZCCHC23Q6ZST2 131 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 ANGPTL5Q86XS5 388 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 DYDC1Q8WWB3 177 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 AP1S3Q96PC3 154 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 CIB3Q96Q77 187 aaPredicted RBP0.28□□□□□ -2.36
SKP1-203ENST00000517625 CCDC32Q9BV29 185 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 C19orf12Q9NSK7 152 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 GID8Q9NWU2 228 aa0.28□□□□□ -2.36
SKP1-203ENST00000517625 TET1Q8NFU7 2136 aa0.28□□□□□ -2.37
SKP1-203ENST00000517625 RB1CC1Q8TDY2 1594 aa0.28□□□□□ -2.37
SKP1-203ENST00000517625 DNAH1Q9P2D7 4330 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 PREX1Q8TCU6 1659 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 PTPRFP10586 1907 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 C5orf58C9J3I9 102 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 FAM107AO95990 144 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 FABP2P12104 132 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 SDC2P34741 201 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 DNAJB13P59910 316 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 SPINK13Q1W4C9 94 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 XAF1Q6GPH4 301 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 TMEM229BQ8NBD8 167 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 OR5H6Q8NGV6 325 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 PRELID3AQ96N28 172 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 HOPXQ9BPY8 73 aaPredicted RBP0.27□□□□□ -2.37
SKP1-203ENST00000517625 PAPPA2Q9BXP8 1791 aa0.27□□□□□ -2.37
SKP1-203ENST00000517625 MYO5AQ9Y4I1 1855 aaKnown RBP0.27□□□□□ -2.37
SKP1-203ENST00000517625 ZFC3H1O60293 1989 aaKnown RBP0.26□□□□□ -2.37
SKP1-203ENST00000517625 AHCTF1Q8WYP5 2266 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 SYNE1Q8NF91 8797 aaKnown RBP0.26□□□□□ -2.37
SKP1-203ENST00000517625 TRBV27A0A0K0K1C4 114 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 ASIPP42127 132 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 NEDD8Q15843 81 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 Q86TA4 180 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 TCTEX1D1Q8N7M0 179 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 LXNQ9BS40 222 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 LIMD2Q9BT23 127 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 FAM103A1Q9BTL3 118 aaKnown RBP0.26□□□□□ -2.37
SKP1-203ENST00000517625 MPC1Q9Y5U8 109 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 TECPR2O15040 1411 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 SYNMO15061 1565 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 SMARCA2P51531 1590 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 ZCCHC11Q5TAX3 1644 aaKnown RBP0.26□□□□□ -2.37
SKP1-203ENST00000517625 MADDQ8WXG6 1647 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 TSC2P49815 1807 aa0.26□□□□□ -2.37
SKP1-203ENST00000517625 ADAMTS12P58397 1594 aa0.25□□□□□ -2.37
SKP1-203ENST00000517625 C3orf85A0A1B0GTC6 90 aa0.25□□□□□ -2.37
SKP1-203ENST00000517625 ARL5CA6NH57 179 aa0.25□□□□□ -2.37
SKP1-203ENST00000517625 E7EQ34 232 aa0.25□□□□□ -2.37
SKP1-203ENST00000517625 GABARAPH6UMI1 98 aa0.25□□□□□ -2.37
SKP1-203ENST00000517625 SPRR2EP22531 72 aa0.25□□□□□ -2.37
SKP1-203ENST00000517625 SPRR2BP35325 72 aa0.25□□□□□ -2.37
SKP1-203ENST00000517625 SPRR2AP35326 72 aa0.25□□□□□ -2.37
SKP1-203ENST00000517625 MAXP61244 160 aa0.25□□□□□ -2.37
SKP1-203ENST00000517625 LSM3P62310 102 aaKnown RBP0.25□□□□□ -2.37
SKP1-203ENST00000517625 PCBD2Q9H0N5 130 aa0.25□□□□□ -2.37
SKP1-203ENST00000517625 LPAR5Q9H1C0 372 aa0.25□□□□□ -2.37
SKP1-203ENST00000517625 TAF9BQ9HBM6 251 aa0.25□□□□□ -2.37
SKP1-203ENST00000517625 MRPL35Q9NZE8 188 aaKnown RBP0.25□□□□□ -2.37
SKP1-203ENST00000517625 CHD3Q12873 2000 aaKnown RBP0.25□□□□□ -2.37
SKP1-203ENST00000517625 ALMS1Q8TCU4 4167 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 CEP170BQ9Y4F5 1589 aaPredicted RBP0.24□□□□□ -2.37
SKP1-203ENST00000517625 TULP4Q9NRJ4 1543 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 SACSQ9NZJ4 4579 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 TRBV7-6A0A0J9YX20 115 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 LOC107986453A0A1B0GWG9 222 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms