RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 FAM25CB3EWG5 89 aa1.39□□□□□ -2.19
RNU6-488P-201ENST00000515918 FAM25GB3EWG6 89 aa1.39□□□□□ -2.19
RNU6-488P-201ENST00000515918 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
RNU6-488P-201ENST00000515918 PSMG3Q9BT73 122 aaPredicted RBP1.39□□□□□ -2.19
RNU6-488P-201ENST00000515918 MRPL35Q9NZE8 188 aaKnown RBP1.39□□□□□ -2.19
RNU6-488P-201ENST00000515918 CCDC167Q9P0B6 97 aa1.39□□□□□ -2.19
RNU6-488P-201ENST00000515918 TRAV12-2A0A075B6T6 113 aa1.38□□□□□ -2.19
RNU6-488P-201ENST00000515918 TRBV10-1A0A0K0K1A3 114 aa1.38□□□□□ -2.19
RNU6-488P-201ENST00000515918 NBDYA0A0U1RRE5 68 aa1.38□□□□□ -2.19
RNU6-488P-201ENST00000515918 LOC101927531A0A1B0GV80 90 aa1.38□□□□□ -2.19
RNU6-488P-201ENST00000515918 NCR3O14931 201 aa1.38□□□□□ -2.19
RNU6-488P-201ENST00000515918 KRTAP5-9P26371 169 aa1.38□□□□□ -2.19
RNU6-488P-201ENST00000515918 DEFB132Q7Z7B7 95 aa1.38□□□□□ -2.19
RNU6-488P-201ENST00000515918 KCNRGQ8N5I3 272 aa1.38□□□□□ -2.19
RNU6-488P-201ENST00000515918 C2orf88Q9BSF0 95 aa1.38□□□□□ -2.19
RNU6-488P-201ENST00000515918 NDUFA12Q9UI09 145 aa1.38□□□□□ -2.19
RNU6-488P-201ENST00000515918 CDK12Q9NYV4 1490 aaPredicted RBP1.37□□□□□ -2.19
RNU6-488P-201ENST00000515918 FLG2Q5D862 2391 aaPredicted RBP1.37□□□□□ -2.19
RNU6-488P-201ENST00000515918 PIRTP0C851 137 aa1.37□□□□□ -2.19
RNU6-488P-201ENST00000515918 SPCS2Q15005 226 aa1.37□□□□□ -2.19
RNU6-488P-201ENST00000515918 CHD3Q12873 2000 aaKnown RBP1.37□□□□□ -2.19
RNU6-488P-201ENST00000515918 BCL9LQ86UU0 1499 aa1.37□□□□□ -2.19
RNU6-488P-201ENST00000515918 SPAARA0A1B0GVQ0 90 aa1.36□□□□□ -2.19
RNU6-488P-201ENST00000515918 CCKP06307 115 aa1.36□□□□□ -2.19
RNU6-488P-201ENST00000515918 FXYD3Q14802 87 aa1.36□□□□□ -2.19
RNU6-488P-201ENST00000515918 PDCD10Q9BUL8 212 aa1.36□□□□□ -2.19
RNU6-488P-201ENST00000515918 FOCADQ5VW36 1801 aa1.36□□□□□ -2.19
RNU6-488P-201ENST00000515918 NCOA6Q14686 2063 aaPredicted RBP1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 MUC6Q6W4X9 2439 aa1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 FAM92AA1XBS5 289 aa1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 HIGD1CA8MV81 97 aa1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 CCDC179H3BU77 68 aa1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 APODP05090 189 aa1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 HIST1H1DP16402 221 aaKnown RBP1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 MEIG1Q5JSS6 88 aa1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 XAF1Q6GPH4 301 aa1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 SNRNP25Q9BV90 132 aaKnown RBP1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 TMEM242Q9NWH2 141 aa1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 KIF13AQ9H1H9 1805 aa1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 COL6A6A6NMZ7 2263 aa1.35□□□□□ -2.19
RNU6-488P-201ENST00000515918 MYH6P13533 1939 aa1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 MYH13Q9UKX3 1938 aa1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 PRRC2BQ5JSZ5 2229 aaKnown RBP1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 IL5P05113 134 aa1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 SPANXN1Q5VSR9 72 aa1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 OR2T2Q6IF00 324 aa1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 LINC00575Q6W349 94 aa1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 Q6ZQY7 126 aa1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 C5orf56Q8N8D9 126 aa1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 IFI27L1Q96BM0 104 aa1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 LINC00208Q96KT6 92 aa1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 CCL19Q99731 98 aa1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 SEC11CQ9BY50 192 aa1.34□□□□□ -2.19
RNU6-488P-201ENST00000515918 DLG5Q8TDM6 1919 aa1.34□□□□□ -2.2
RNU6-488P-201ENST00000515918 SLC48A1Q6P1K1 146 aa1.33□□□□□ -2.2
RNU6-488P-201ENST00000515918 LSM10Q969L4 123 aaKnown RBP1.33□□□□□ -2.2
RNU6-488P-201ENST00000515918 SPTSSAQ969W0 71 aa1.33□□□□□ -2.2
RNU6-488P-201ENST00000515918 AGPAT4-IT1Q9H0P7 198 aa1.33□□□□□ -2.2
RNU6-488P-201ENST00000515918 PLXNA2O75051 1894 aa1.33□□□□□ -2.2
RNU6-488P-201ENST00000515918 NPC2P61916 151 aa1.32□□□□□ -2.2
RNU6-488P-201ENST00000515918 Q86TA4 180 aa1.32□□□□□ -2.2
RNU6-488P-201ENST00000515918 TSKUQ8WUA8 353 aa1.32□□□□□ -2.2
RNU6-488P-201ENST00000515918 TMEM141Q96I45 108 aa1.32□□□□□ -2.2
RNU6-488P-201ENST00000515918 ZGRF1Q86YA3 2104 aa1.31□□□□□ -2.2
RNU6-488P-201ENST00000515918 CFTRP13569 1480 aa1.31□□□□□ -2.2
RNU6-488P-201ENST00000515918 WDR7Q9Y4E6 1490 aa1.31□□□□□ -2.2
RNU6-488P-201ENST00000515918 AKAP11Q9UKA4 1901 aa1.31□□□□□ -2.2
RNU6-488P-201ENST00000515918 FGF7P21781 194 aa1.31□□□□□ -2.2
RNU6-488P-201ENST00000515918 BTG2P78543 158 aa1.31□□□□□ -2.2
RNU6-488P-201ENST00000515918 NDUFA11Q86Y39 141 aa1.31□□□□□ -2.2
RNU6-488P-201ENST00000515918 NALCNQ8IZF0 1738 aa1.3□□□□□ -2.2
RNU6-488P-201ENST00000515918 TRAV12-3A0A0B4J271 114 aa1.3□□□□□ -2.2
RNU6-488P-201ENST00000515918 TRBV30A0A0K0K1B3 111 aa1.3□□□□□ -2.2
RNU6-488P-201ENST00000515918 NDUFB6O95139 128 aa1.3□□□□□ -2.2
RNU6-488P-201ENST00000515918 ARL14EPLP0DKL9 152 aa1.3□□□□□ -2.2
RNU6-488P-201ENST00000515918 UBE2G1P62253 170 aa1.3□□□□□ -2.2
RNU6-488P-201ENST00000515918 C9orf116Q5BN46 136 aaPredicted RBP1.3□□□□□ -2.2
RNU6-488P-201ENST00000515918 RERGLQ9H628 205 aa1.3□□□□□ -2.2
RNU6-488P-201ENST00000515918 BLMP54132 1417 aaPredicted RBP1.3□□□□□ -2.2
RNU6-488P-201ENST00000515918 PIPP12273 146 aaPredicted RBP1.29□□□□□ -2.2
RNU6-488P-201ENST00000515918 CAV3P56539 151 aa1.29□□□□□ -2.2
RNU6-488P-201ENST00000515918 S100A7L2Q5SY68 101 aa1.29□□□□□ -2.2
RNU6-488P-201ENST00000515918 Q8N6K4 173 aa1.29□□□□□ -2.2
RNU6-488P-201ENST00000515918 C10orf82Q8WW14 230 aa1.29□□□□□ -2.2
RNU6-488P-201ENST00000515918 SCN3BQ9NY72 215 aa1.29□□□□□ -2.2
RNU6-488P-201ENST00000515918 SERP1Q9Y6X1 66 aa1.29□□□□□ -2.2
RNU6-488P-201ENST00000515918 SMG6Q86US8 1419 aaKnown RBP1.29□□□□□ -2.2
RNU6-488P-201ENST00000515918 RREB1Q92766 1687 aa1.29□□□□□ -2.2
RNU6-488P-201ENST00000515918 NINQ8N4C6 2090 aa1.28□□□□□ -2.2
RNU6-488P-201ENST00000515918 HELZ2Q9BYK8 2649 aaKnown RBP1.28□□□□□ -2.2
RNU6-488P-201ENST00000515918 TEX49A0A1B0GTD5 131 aa1.28□□□□□ -2.2
RNU6-488P-201ENST00000515918 TCRBV3S1A0A5B6 114 aa1.28□□□□□ -2.2
RNU6-488P-201ENST00000515918 SNCGO76070 127 aa1.28□□□□□ -2.2
RNU6-488P-201ENST00000515918 APOC1P02654 83 aa1.28□□□□□ -2.2
RNU6-488P-201ENST00000515918 AKAIN1P0CW23 69 aa1.28□□□□□ -2.2
RNU6-488P-201ENST00000515918 ZNF56Q15929 161 aa1.28□□□□□ -2.2
RNU6-488P-201ENST00000515918 Q6AWC8 147 aa1.28□□□□□ -2.2
RNU6-488P-201ENST00000515918 Q6ZS92 163 aa1.28□□□□□ -2.2
RNU6-488P-201ENST00000515918 PP6455Q8WZ26 134 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms