RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 NDPQ00604 133 aa8.84□□□□□ -0.99
TCOF1-211ENST00000513346 A0A087WWL8 130 aa8.84□□□□□ -1
TCOF1-211ENST00000513346 UTF1Q5T230 341 aa8.84□□□□□ -1
TCOF1-211ENST00000513346 TRGV11A0A075B6L2 103 aa8.83□□□□□ -1
TCOF1-211ENST00000513346 C22orf46C9J442 243 aa8.83□□□□□ -1
TCOF1-211ENST00000513346 MTORP42345 2549 aa8.83□□□□□ -1
TCOF1-211ENST00000513346 PKD1L2Q7Z442 2459 aa8.83□□□□□ -1
TCOF1-211ENST00000513346 DIAPH2-AS1Q14236 149 aa8.83□□□□□ -1
TCOF1-211ENST00000513346 S100A7L2Q5SY68 101 aa8.83□□□□□ -1
TCOF1-211ENST00000513346 IGHG4P01861 327 aa8.83□□□□□ -1
TCOF1-211ENST00000513346 LOXL1Q08397 574 aaPredicted RBP8.83□□□□□ -1
TCOF1-211ENST00000513346 TMEM126AQ9H061 195 aa8.83□□□□□ -1
TCOF1-211ENST00000513346 MSRB1Q9NZV6 116 aa8.83□□□□□ -1
TCOF1-211ENST00000513346 C2orf91Q6ZV80 131 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 KLHL30-AS1Q8NEE0 82 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 OVOL2Q9BRP0 275 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 SPRY4Q9C004 299 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 CRPP02741 224 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 LINC00322Q6ZN03 302 aaPredicted RBP8.82□□□□□ -1
TCOF1-211ENST00000513346 ZNF493Q6ZR52 646 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 CLUHP3Q96NS8 147 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 IGHV1-69DA0A0B4J2H0 117 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 IGHV1-69P01742 117 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 TRACP01848 142 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 MT-ATP8P03928 68 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 DPH3Q96FX2 82 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 TM2D2Q9BX73 214 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 SDHAF1A6NFY7 115 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 TEX36Q5VZQ5 186 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 Q71RC1 249 aaPredicted RBP8.82□□□□□ -1
TCOF1-211ENST00000513346 PTH2Q96A98 100 aa8.82□□□□□ -1
TCOF1-211ENST00000513346 TRBV6-1A0A0K0K1D8 114 aa8.81□□□□□ -1
TCOF1-211ENST00000513346 RASL10AQ92737 203 aa8.81□□□□□ -1
TCOF1-211ENST00000513346 Q96MF0 132 aa8.81□□□□□ -1
TCOF1-211ENST00000513346 MLST8Q9BVC4 326 aa8.81□□□□□ -1
TCOF1-211ENST00000513346 CMC4P56277 68 aaPredicted RBP8.81□□□□□ -1
TCOF1-211ENST00000513346 DOPEY1Q5JWR5 2465 aa8.81□□□□□ -1
TCOF1-211ENST00000513346 FAM223BA6NKX1 122 aa8.81□□□□□ -1
TCOF1-211ENST00000513346 INS-IGF2F8WCM5 200 aa8.81□□□□□ -1
TCOF1-211ENST00000513346 FAM223AQ8IWN6 122 aa8.81□□□□□ -1
TCOF1-211ENST00000513346 TRAV12-1A0A0B4J245 112 aa8.81□□□□□ -1
TCOF1-211ENST00000513346 OVOL3O00110 214 aa8.81□□□□□ -1
TCOF1-211ENST00000513346 TRPT1Q86TN4 253 aaKnown RBP8.81□□□□□ -1
TCOF1-211ENST00000513346 RHPN1-AS1Q9BWJ2 59 aa8.81□□□□□ -1
TCOF1-211ENST00000513346 TRGV4A0A0C4DH28 118 aa8.8□□□□□ -1
TCOF1-211ENST00000513346 PRORYQ9H606 182 aa8.8□□□□□ -1
TCOF1-211ENST00000513346 ATP6V0E1O15342 81 aa8.8□□□□□ -1
TCOF1-211ENST00000513346 GRNP28799 593 aaKnown RBP8.8□□□□□ -1
TCOF1-211ENST00000513346 HERV-K104P63124 156 aa8.8□□□□□ -1
TCOF1-211ENST00000513346 PROP1O75360 226 aa8.8□□□□□ -1
TCOF1-211ENST00000513346 CFAP161Q6P656 301 aa8.8□□□□□ -1
TCOF1-211ENST00000513346 NDUFA12Q9UI09 145 aa8.8□□□□□ -1
TCOF1-211ENST00000513346 ACYP1P07311 99 aa8.79□□□□□ -1
TCOF1-211ENST00000513346 CR1LQ2VPA4 569 aa8.79□□□□□ -1
TCOF1-211ENST00000513346 LINC01620Q4KN68 170 aa8.79□□□□□ -1
TCOF1-211ENST00000513346 C3orf56Q8N813 242 aa8.79□□□□□ -1
TCOF1-211ENST00000513346 LEPROTO15243 131 aa8.79□□□□□ -1
TCOF1-211ENST00000513346 DYNAPQ8N1N2 210 aa8.79□□□□□ -1
TCOF1-211ENST00000513346 CFHR4Q92496 578 aa8.79□□□□□ -1
TCOF1-211ENST00000513346 IGKV1-17P01599 117 aa8.79□□□□□ -1
TCOF1-211ENST00000513346 EIF4EBP1Q13541 118 aaPredicted RBP8.79□□□□□ -1
TCOF1-211ENST00000513346 GATD1Q8NB37 220 aa8.79□□□□□ -1
TCOF1-211ENST00000513346 LINC00158P58513 81 aa8.79□□□□□ -1
TCOF1-211ENST00000513346 SPATA25Q9BR10 227 aa8.79□□□□□ -1
TCOF1-211ENST00000513346 DAZ1Q9NQZ3 744 aaKnown RBP8.79□□□□□ -1
TCOF1-211ENST00000513346 MRPL36Q9P0J6 103 aaKnown RBP8.79□□□□□ -1
TCOF1-211ENST00000513346 A4D1N5 150 aa8.78□□□□□ -1
TCOF1-211ENST00000513346 J3QLI3 93 aa8.78□□□□□ -1
TCOF1-211ENST00000513346 WISP2O76076 250 aa8.78□□□□□ -1
TCOF1-211ENST00000513346 SYNJ2BPP57105 145 aa8.78□□□□□ -1
TCOF1-211ENST00000513346 UFSP1Q6NVU6 142 aa8.78□□□□□ -1
TCOF1-211ENST00000513346 C8orf31Q8N9H6 132 aa8.78□□□□□ -1
TCOF1-211ENST00000513346 PRIMA1Q86XR5 153 aa8.78□□□□□ -1
TCOF1-211ENST00000513346 FAM110DQ8TAY7 271 aaPredicted RBP8.78□□□□□ -1
TCOF1-211ENST00000513346 AGPAT4-IT1Q9H0P7 198 aa8.78□□□□□ -1
TCOF1-211ENST00000513346 C11orf68Q9H3H3 251 aaKnown RBP8.78□□□□□ -1
TCOF1-211ENST00000513346 KAAG1Q9UBP8 84 aa8.78□□□□□ -1
TCOF1-211ENST00000513346 G3V318 75 aa8.77□□□□□ -1
TCOF1-211ENST00000513346 TNCP24821 2201 aa8.77□□□□□ -1.01
TCOF1-211ENST00000513346 TMEM131Q92545 1883 aa8.77□□□□□ -1.01
TCOF1-211ENST00000513346 NDUFV3P56181 108 aaKnown RBP8.77□□□□□ -1.01
TCOF1-211ENST00000513346 IGHV3-73A0A0B4J1V6 119 aa8.77□□□□□ -1.01
TCOF1-211ENST00000513346 LHBP01229 141 aa8.77□□□□□ -1.01
TCOF1-211ENST00000513346 PIFOQ8TCI5 191 aa8.77□□□□□ -1.01
TCOF1-211ENST00000513346 RBAKDNA6NC62 111 aa8.76□□□□□ -1.01
TCOF1-211ENST00000513346 I3L2K1 104 aa8.76□□□□□ -1.01
TCOF1-211ENST00000513346 I3L3M4 83 aa8.76□□□□□ -1.01
TCOF1-211ENST00000513346 TMEM86BQ8N661 226 aa8.76□□□□□ -1.01
TCOF1-211ENST00000513346 IGKV1D-37A0A075B6S9 117 aa8.76□□□□□ -1.01
TCOF1-211ENST00000513346 SPRNQ5BIV9 151 aa8.76□□□□□ -1.01
TCOF1-211ENST00000513346 PAX4O43316 350 aa8.76□□□□□ -1.01
TCOF1-211ENST00000513346 ZNF625Q96I27 306 aaPredicted RBP8.76□□□□□ -1.01
TCOF1-211ENST00000513346 DNAJC30Q96LL9 226 aa8.76□□□□□ -1.01
TCOF1-211ENST00000513346 ADARB2-AS1A8MUL3 147 aa8.75□□□□□ -1.01
TCOF1-211ENST00000513346 E7EUB6 86 aa8.75□□□□□ -1.01
TCOF1-211ENST00000513346 SOCS3O14543 225 aa8.75□□□□□ -1.01
TCOF1-211ENST00000513346 RPL35AP18077 110 aaKnown RBP8.75□□□□□ -1.01
TCOF1-211ENST00000513346 Q8N7P7 452 aa8.75□□□□□ -1.01
TCOF1-211ENST00000513346 FAM236AA0A1B0GUQ0 79 aa8.75□□□□□ -1.01
TCOF1-211ENST00000513346 FAM236BA0A1B0GV22 79 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms