RNA–Protein interactions for RNA: ENST00000512789.5

GYPA-209, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-209ENST00000512789 TLNRD1Q9H1K6 362 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 NIT2Q9NQR4 276 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 TAS2R7Q9NYW3 318 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 SLC22A13Q9Y226 551 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 ESPL1Q14674 2120 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 ANKARQ7Z5J8 1434 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 SNRNP200O75643 2136 aaKnown RBP0.55□□□□□ -2.32
GYPA-209ENST00000512789 USF3Q68DE3 2245 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 TMEM114B3SHH9 223 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 C17orf112F2Z3M2 114 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 OR7C1O76099 320 aaPredicted RBP0.55□□□□□ -2.32
GYPA-209ENST00000512789 IFNA7P01567 189 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 TCRBP04435 133 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 CDKN2CP42773 168 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 RRN3P1Q2M238 152 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 PDZD9Q8IXQ8 264 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 OR10AC1Q8NH08 325 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 LINC00052Q96N35 136 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 SIGMAR1Q99720 223 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 PARD6GQ9BYG4 376 aaPredicted RBP0.55□□□□□ -2.32
GYPA-209ENST00000512789 RNASE7Q9H1E1 156 aaKnown RBP0.55□□□□□ -2.32
GYPA-209ENST00000512789 PARVBQ9HBI1 364 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 MED29Q9NX70 200 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 CHCHD2Q9Y6H1 151 aaPredicted RBP0.55□□□□□ -2.32
GYPA-209ENST00000512789 WNK2Q9Y3S1 2297 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 VPS8Q8N3P4 1428 aa0.55□□□□□ -2.32
GYPA-209ENST00000512789 ZNF236Q9UL36 1845 aa0.54□□□□□ -2.32
GYPA-209ENST00000512789 PTPRDP23468 1912 aa0.54□□□□□ -2.32
GYPA-209ENST00000512789 MCM3APO60318 1980 aa0.54□□□□□ -2.32
GYPA-209ENST00000512789 CHD3Q12873 2000 aaKnown RBP0.54□□□□□ -2.32
GYPA-209ENST00000512789 TRBV19A0A075B6N1 114 aa0.54□□□□□ -2.32
GYPA-209ENST00000512789 TRAV10A0A0B4J240 114 aa0.54□□□□□ -2.32
GYPA-209ENST00000512789 F8W1H4 67 aa0.54□□□□□ -2.32
GYPA-209ENST00000512789 ERC2-IT1O76042 136 aa0.54□□□□□ -2.32
GYPA-209ENST00000512789 DSCR4P56555 118 aaPredicted RBP0.54□□□□□ -2.32
GYPA-209ENST00000512789 LSM6P62312 80 aaKnown RBP0.54□□□□□ -2.32
GYPA-209ENST00000512789 KRTAP20-1Q3LI63 56 aa0.54□□□□□ -2.32
GYPA-209ENST00000512789 PSMF1Q92530 271 aa0.54□□□□□ -2.32
GYPA-209ENST00000512789 TMEM138Q9NPI0 162 aa0.54□□□□□ -2.32
GYPA-209ENST00000512789 PCTPQ9UKL6 214 aa0.54□□□□□ -2.32
GYPA-209ENST00000512789 ZNF106Q9H2Y7 1883 aaKnown RBP0.54□□□□□ -2.32
GYPA-209ENST00000512789 MUC5ACP98088 5654 aa0.54□□□□□ -2.32
GYPA-209ENST00000512789 MED12Q93074 2177 aa0.53□□□□□ -2.32
GYPA-209ENST00000512789 DOCK2Q92608 1830 aa0.53□□□□□ -2.32
GYPA-209ENST00000512789 TRAV4A0A0B4J268 109 aa0.53□□□□□ -2.32
GYPA-209ENST00000512789 RNASE4P34096 147 aaKnown RBP0.53□□□□□ -2.32
GYPA-209ENST00000512789 DEFA3P59666 94 aa0.53□□□□□ -2.32
GYPA-209ENST00000512789 UBE2BP63146 152 aa0.53□□□□□ -2.32
GYPA-209ENST00000512789 CCL7P80098 99 aa0.53□□□□□ -2.32
GYPA-209ENST00000512789 LELP1Q5T871 98 aa0.53□□□□□ -2.32
GYPA-209ENST00000512789 EIF5AL1Q6IS14 154 aaKnown RBP0.53□□□□□ -2.32
GYPA-209ENST00000512789 ZNF833PQ6ZTB9 187 aa0.53□□□□□ -2.32
GYPA-209ENST00000512789 OR11H6Q8NGC7 330 aa0.53□□□□□ -2.32
GYPA-209ENST00000512789 OR10K1Q8NGX5 313 aa0.53□□□□□ -2.32
GYPA-209ENST00000512789 PBOV1Q9GZY1 135 aa0.53□□□□□ -2.32
GYPA-209ENST00000512789 PLXND1Q9Y4D7 1925 aa0.53□□□□□ -2.32
GYPA-209ENST00000512789 SPAARA0A1B0GVQ0 90 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 FAM159BA6NKW6 160 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 E7EUB6 86 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 KLF7O75840 302 aaPredicted RBP0.52□□□□□ -2.33
GYPA-209ENST00000512789 CD2P06729 351 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 COX7CP15954 63 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 SRIP30626 198 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 Q8IYB0 196 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 MUCL1Q96DR8 90 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 PRRT1Q99946 306 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 TMEM126AQ9H061 195 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 OR52A1Q9UKL2 312 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 ARL2BPQ9Y2Y0 163 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 FAM32AQ9Y421 112 aaKnown RBP0.52□□□□□ -2.33
GYPA-209ENST00000512789 RFX7Q2KHR2 1363 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 ANKRD50Q9ULJ7 1429 aa0.52□□□□□ -2.33
GYPA-209ENST00000512789 SIPA1L3O60292 1781 aaPredicted RBP0.52□□□□□ -2.33
GYPA-209ENST00000512789 CST8O60676 142 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 OBSL1O75147 1896 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 OR10J4P0C629 311 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 CXCL8P10145 99 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 CDK6Q00534 326 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 ROCK1Q13464 1354 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 SPINK9Q5DT21 86 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 IFT20Q8IY31 132 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 LYSMD1Q96S90 227 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 C10orf95Q9H7T3 257 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 PSTPIP2Q9H939 334 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 ENY2Q9NPA8 101 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 HSPB8Q9UJY1 196 aa0.51□□□□□ -2.33
GYPA-209ENST00000512789 FLGP20930 4061 aaPredicted RBP0.51□□□□□ -2.33
GYPA-209ENST00000512789 NUP98P52948 1817 aa0.5□□□□□ -2.33
GYPA-209ENST00000512789 PARP14Q460N5 1801 aa0.5□□□□□ -2.33
GYPA-209ENST00000512789 UBR2Q8IWV8 1755 aa0.5□□□□□ -2.33
GYPA-209ENST00000512789 TAX1BP3O14907 124 aa0.5□□□□□ -2.33
GYPA-209ENST00000512789 HMGB3O15347 200 aaKnown RBP0.5□□□□□ -2.33
GYPA-209ENST00000512789 FXYD6P3P58550 94 aa0.5□□□□□ -2.33
GYPA-209ENST00000512789 GRINAQ7Z429 371 aa0.5□□□□□ -2.33
GYPA-209ENST00000512789 DEFB124Q8NES8 71 aa0.5□□□□□ -2.33
GYPA-209ENST00000512789 OR10X1Q8NGY0 326 aa0.5□□□□□ -2.33
GYPA-209ENST00000512789 TEX37Q96LM6 180 aa0.5□□□□□ -2.33
GYPA-209ENST00000512789 TNCP24821 2201 aa0.5□□□□□ -2.33
GYPA-209ENST00000512789 CCNB3Q8WWL7 1395 aa0.49□□□□□ -2.33
GYPA-209ENST00000512789 KIAA1549Q9HCM3 1950 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms