RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 LTAP01374 205 aa7.96□□□□□ -1.13
SH3RF1-205ENST00000511421 ORM1P02763 201 aa7.96□□□□□ -1.13
SH3RF1-205ENST00000511421 GATA1P15976 413 aaPredicted RBP7.96□□□□□ -1.13
SH3RF1-205ENST00000511421 UBE2G1P62253 170 aa7.96□□□□□ -1.13
SH3RF1-205ENST00000511421 TTC32Q5I0X7 151 aa7.96□□□□□ -1.13
SH3RF1-205ENST00000511421 ZNF506Q5JVG8 444 aa7.96□□□□□ -1.13
SH3RF1-205ENST00000511421 CFAP126Q5VTH2 177 aa7.96□□□□□ -1.13
SH3RF1-205ENST00000511421 ZNF575Q86XF7 245 aa7.96□□□□□ -1.13
SH3RF1-205ENST00000511421 LOC100131303A0A0U1RQF7 123 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 SH2D1AO60880 128 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 NXPH4O95158 308 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 C1QBP02746 253 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 SRIP30626 198 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 AKR1C3P42330 323 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 ZNF674Q2M3X9 581 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 HERC2O95714 4834 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 TRAV1-1A0A0B4J248 108 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 SCO2A0A1W2PP80 73 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 B4DEV8 164 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 KRBOX1C9JBD0 128 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 SIVA1O15304 175 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 CIDEAO60543 219 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 CCL20P78556 96 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 TNP2Q05952 138 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 DNLZQ5SXM8 178 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 FAM162BQ5T6X4 162 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 PCNPQ8WW12 178 aaKnown RBP7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 IL36BQ9NZH7 164 aa7.95□□□□□ -1.14
SH3RF1-205ENST00000511421 A0A1B0GVG6 124 aa7.94□□□□□ -1.14
SH3RF1-205ENST00000511421 S100A4P26447 101 aaKnown RBP7.94□□□□□ -1.14
SH3RF1-205ENST00000511421 ASIPP42127 132 aa7.94□□□□□ -1.14
SH3RF1-205ENST00000511421 RAB5CP51148 216 aa7.94□□□□□ -1.14
SH3RF1-205ENST00000511421 PIK3CD-AS1Q5SR53 167 aa7.94□□□□□ -1.14
SH3RF1-205ENST00000511421 SLC25A29Q8N8R3 303 aa7.94□□□□□ -1.14
SH3RF1-205ENST00000511421 IGHV3-73A0A0B4J1V6 119 aa7.93□□□□□ -1.14
SH3RF1-205ENST00000511421 M0R036 132 aa7.93□□□□□ -1.14
SH3RF1-205ENST00000511421 S100A9P06702 114 aaKnown RBP7.93□□□□□ -1.14
SH3RF1-205ENST00000511421 SULT1A2P50226 295 aa7.93□□□□□ -1.14
SH3RF1-205ENST00000511421 LINC01559Q495D7 138 aa7.93□□□□□ -1.14
SH3RF1-205ENST00000511421 EIF5AL1Q6IS14 154 aaKnown RBP7.93□□□□□ -1.14
SH3RF1-205ENST00000511421 NHLRC2Q8NBF2 726 aa7.93□□□□□ -1.14
SH3RF1-205ENST00000511421 TXNDC17Q9BRA2 123 aa7.93□□□□□ -1.14
SH3RF1-205ENST00000511421 MLST8Q9BVC4 326 aa7.93□□□□□ -1.14
SH3RF1-205ENST00000511421 KIAA1109Q2LD37 5005 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 TRBV6-4A0A1B0GX49 114 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 GRIFINA4D1Z8 144 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 A6NJY4 79 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 H3BVH4 76 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 BTF3P20290 206 aaKnown RBP7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 SLC51BQ86UW2 128 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 PARLQ9H300 379 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 SCRT2Q9NQ03 307 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 ARMS2P0C7Q2 107 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 RHOHQ15669 191 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 DMRTA1Q5VZB9 504 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 UFSP1Q6NVU6 142 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 Q6ZSN1 163 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 AKAP14Q86UN6 197 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 BAGE2Q86Y30 109 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 JPT2Q9H910 190 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 MANBALQ9NQG1 85 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 GNG13Q9P2W3 67 aa7.92□□□□□ -1.14
SH3RF1-205ENST00000511421 A8MWV9 139 aa7.91□□□□□ -1.14
SH3RF1-205ENST00000511421 MGST1P10620 155 aaKnown RBP7.91□□□□□ -1.14
SH3RF1-205ENST00000511421 TIRAPP58753 221 aa7.91□□□□□ -1.14
SH3RF1-205ENST00000511421 LINC00315P59091 139 aa7.91□□□□□ -1.14
SH3RF1-205ENST00000511421 ZFP2Q6ZN57 461 aa7.91□□□□□ -1.14
SH3RF1-205ENST00000511421 SH2D6Q7Z4S9 175 aa7.91□□□□□ -1.14
SH3RF1-205ENST00000511421 WFDC10BQ8IUB3 73 aa7.91□□□□□ -1.14
SH3RF1-205ENST00000511421 C9orf62Q8N4C0 152 aa7.91□□□□□ -1.14
SH3RF1-205ENST00000511421 C11orf52Q96A22 123 aa7.91□□□□□ -1.14
SH3RF1-205ENST00000511421 PRADC1Q9BSG0 188 aa7.91□□□□□ -1.14
SH3RF1-205ENST00000511421 SAMD10Q9BYL1 202 aa7.91□□□□□ -1.14
SH3RF1-205ENST00000511421 TMSB15BA0A087X1C1 80 aa7.9□□□□□ -1.14
SH3RF1-205ENST00000511421 RPL35P42766 123 aaKnown RBP7.9□□□□□ -1.14
SH3RF1-205ENST00000511421 Q6ZRN7 208 aaPredicted RBP7.9□□□□□ -1.14
SH3RF1-205ENST00000511421 S100A1P23297 94 aa7.89□□□□□ -1.15
SH3RF1-205ENST00000511421 DERL1Q9BUN8 251 aa7.89□□□□□ -1.15
SH3RF1-205ENST00000511421 LRP1BQ9NZR2 4599 aa7.89□□□□□ -1.15
SH3RF1-205ENST00000511421 TEX46H3BTG2 121 aa7.89□□□□□ -1.15
SH3RF1-205ENST00000511421 DNAH10OSP0CZ25 163 aa7.89□□□□□ -1.15
SH3RF1-205ENST00000511421 RPL19P84098 196 aaKnown RBP7.89□□□□□ -1.15
SH3RF1-205ENST00000511421 SYT8Q8NBV8 401 aa7.89□□□□□ -1.15
SH3RF1-205ENST00000511421 PHLDA3Q9Y5J5 127 aa7.89□□□□□ -1.15
SH3RF1-205ENST00000511421 LY96Q9Y6Y9 160 aa7.89□□□□□ -1.15
SH3RF1-205ENST00000511421 CXCL1P09341 107 aa7.88□□□□□ -1.15
SH3RF1-205ENST00000511421 LINC00694P0DN24 101 aa7.88□□□□□ -1.15
SH3RF1-205ENST00000511421 SFRP2Q96HF1 295 aa7.88□□□□□ -1.15
SH3RF1-205ENST00000511421 Q9UF83 564 aa7.88□□□□□ -1.15
SH3RF1-205ENST00000511421 TNFRSF18Q9Y5U5 241 aa7.88□□□□□ -1.15
SH3RF1-205ENST00000511421 K7EP13 123 aa7.87□□□□□ -1.15
SH3RF1-205ENST00000511421 IGLV2-8P01709 118 aa7.87□□□□□ -1.15
SH3RF1-205ENST00000511421 CRYGDP07320 174 aa7.87□□□□□ -1.15
SH3RF1-205ENST00000511421 MED14OSP0DP75 135 aa7.87□□□□□ -1.15
SH3RF1-205ENST00000511421 C14orf178Q8N769 122 aaPredicted RBP7.87□□□□□ -1.15
SH3RF1-205ENST00000511421 TRAV9-2A0A087WT02 112 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 M0R381 172 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 RHODO00212 210 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 BCL2P10415 239 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 EVI2AP22794 236 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms