RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 OR5AS1Q8N127 324 aa1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 LINC00052Q96N35 136 aa1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 FOCADQ5VW36 1801 aa1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 CDK5RAP2Q96SN8 1893 aa1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 TNRC6AQ8NDV7 1962 aaKnown RBP1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 POLEQ07864 2286 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 ZNF236Q9UL36 1845 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 TRBV6-4A0A1B0GX49 114 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 APOC4-APOC2K7ER74 178 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 NUPR1O60356 82 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 APOC2P02655 101 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 KDELR1P24390 212 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 RPL22P35268 128 aaKnown RBP1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 NDUFA6P56556 154 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 MRPS36P82909 103 aaKnown RBP1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 PSG9Q00887 426 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 LRRC18Q8N456 261 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 Q8TAT8 98 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 PSMF1Q92530 271 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 SNRNP25Q9BV90 132 aaKnown RBP1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 ORMDL1Q9P0S3 153 aa1.8□□□□□ -2.12
HMGB1P47-201ENST00000511281 TRBV27A0A0K0K1C4 114 aa1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 ARL5CA6NH57 179 aa1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 LYNX1P0DP58 116 aa1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 FABP2P12104 132 aa1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 CD52P31358 61 aa1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 NCBP2-AS2Q69YL0 99 aa1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 C3orf62Q6ZUJ4 267 aa1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 DEFB106AQ8N104 65 aa1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 ZNF431Q8TF32 576 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 GGACTQ9BVM4 153 aa1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 CDC42SE1Q9NRR8 79 aa1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 MYH1P12882 1939 aa1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 HEATR1Q9H583 2144 aaKnown RBP1.79□□□□□ -2.12
HMGB1P47-201ENST00000511281 LAMA3Q16787 3333 aa1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 COL6A3P12111 3177 aa1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 EYSQ5T1H1 3165 aa1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 PARP14Q460N5 1801 aa1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 LRRC37A2A6NM11 1700 aa1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 ARL14EPLP0DKL9 152 aa1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 SARNPP82979 210 aaKnown RBP1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 FAM74A1Q5RGS3 127 aa1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 LINC00305Q7Z4B0 112 aa1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 CTAGE3PQ8IX95 158 aa1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 C4orf33Q8N1A6 199 aa1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 OR4B1Q8NGF8 309 aa1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 OR10AG1Q8NH19 301 aa1.78□□□□□ -2.12
HMGB1P47-201ENST00000511281 MYH7P12883 1935 aa1.78□□□□□ -2.13
HMGB1P47-201ENST00000511281 HELZ2Q9BYK8 2649 aaKnown RBP1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 CDH23Q9H251 3354 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 COL6A6A6NMZ7 2263 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 A0A1B0GX51 115 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 EDF1O60869 148 aaKnown RBP1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 SCGB1A1P11684 91 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 C10orf82Q8WW14 230 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 MRPL57Q9BQC6 102 aaKnown RBP1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 SAR1AQ9NR31 198 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 SPANXCQ9NY87 97 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 TAS2R7Q9NYW3 318 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 TRAPPC2LQ9UL33 140 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 ZFP30Q9Y2G7 519 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 MCM3APO60318 1980 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 PLXNA1Q9UIW2 1896 aa1.77□□□□□ -2.13
HMGB1P47-201ENST00000511281 KIAA0100Q14667 2235 aaKnown RBP1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 SPTBN5Q9NRC6 3674 aaKnown RBP1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 PDE4DIPQ5VU43 2346 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 A0A0G2JND7 137 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 LOC107984640A0A0U1RRK4 108 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 FAM92AA1XBS5 289 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 CCL25O15444 150 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 MT-ND6P03923 174 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 CD2P06729 351 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 FABP4P15090 132 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 SRP9P49458 86 aaKnown RBP1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 GDF5OSQ5U4N7 250 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 TMEM229BQ8NBD8 167 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 OR5H6Q8NGV6 325 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 PRELID3AQ96N28 172 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 RANBP2P49792 3224 aaKnown RBP1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 UNC13CQ8NB66 2214 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 UNC80Q8N2C7 3258 aa1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 FLG2Q5D862 2391 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P47-201ENST00000511281 TRBV6-7A0A0A0MS04 114 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 TRAV13-1A0A0B4J241 112 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 H3BMG7 143 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 J3KT08 172 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 COX7CP15954 63 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 MAXP61244 160 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 CCDC153Q494R4 210 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 ZCCHC23Q6ZST2 131 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 LINC00269Q8N2A0 174 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 MORN4Q8NDC4 146 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 NAT14Q8WUY8 206 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 CBLN4Q9NTU7 201 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 TPRKBQ9Y3C4 175 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 VCANP13611 3396 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 MYH8P13535 1937 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 TCHHQ07283 1943 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 MYH4Q9Y623 1939 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms