RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 IFI27P40305 119 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 UBE2E1P51965 193 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 SUB1P53999 127 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 ERCC8Q13216 396 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 RIGQ13278 110 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 FXYD3Q14802 87 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 SPANXN5Q5MJ07 72 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 C2orf82Q6UX34 121 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZFP2Q6ZN57 461 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 KTN1-AS1Q86SY8 53 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 NDUFA11Q86Y39 141 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 DEFB124Q8NES8 71 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 SRSF12Q8WXF0 261 aaKnown RBP3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 UBE2E2Q96LR5 201 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 METTL26Q96S19 204 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 DEFB126Q9BYW3 111 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 C16orf95Q9H693 158 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZNF492Q9P255 531 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 GON4LQ3T8J9 2241 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 ATG2BQ96BY7 2078 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 PLXNB3Q9ULL4 1909 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 SCN3AQ9NY46 2000 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 CDH23Q9H251 3354 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 KIAA1549Q9HCM3 1950 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 UBE2L6O14933 153 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 MRPS12O15235 138 aaKnown RBP3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 LTAP01374 205 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 INAFM2P0DMQ5 153 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 MYCNOSP40205 109 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 DAD1P61803 113 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 SNRPD3P62318 126 aaKnown RBP3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 SDIM1Q6ZPB5 146 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 MDP1Q86V88 176 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZCCHC24Q8N2G6 241 aaKnown RBP3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 DAND5Q8N907 189 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 RPP21Q9H633 154 aaKnown RBP3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 PRO1854Q9UHT4 67 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 SZT2Q5T011 3432 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 PTPRBP23467 1997 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 XIRP2A4UGR9 3374 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 CACNA1EQ15878 2313 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 KNL1Q8NG31 2342 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 CABIN1Q9Y6J0 2220 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZDBF2Q9HCK1 2354 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 COL5A1P20908 1838 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 IGLV3-32A0A0A0MS00 114 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 IGHV1-45A0A0A0MS14 117 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBMY1BA6NDE4 496 aaKnown RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBMY1EA6NEQ0 496 aaKnown RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 KRTAP16-1A8MUX0 517 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 SMKR1H3BMG3 65 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 SS18L1O75177 396 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBMY1DP0C7P1 496 aaKnown RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBMY1A1P0DJD3 496 aaKnown RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBMY1CP0DJD4 496 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZNF823P16415 610 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 SAA4P35542 130 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBMY1FQ15415 496 aaKnown RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 ECSCRQ19T08 205 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 S100A7L2Q5SY68 101 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 ATP5EP2Q5VTU8 51 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 IGFL3Q6UXB1 125 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 LY6G5BQ8NDX9 201 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 C1orf147Q96MC9 270 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 NABP2Q9BQ15 211 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 NCOA6Q14686 2063 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 DOCK11Q5JSL3 2073 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 THADAQ6YHU6 1953 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 MDC1Q14676 2089 aaKnown RBP3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 KNTC1P50748 2209 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 TRAV3A0A0B4J244 114 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 TRBV30A0A0K0K1B3 111 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 TEX49A0A1B0GTD5 131 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 PCNX2A6NKB5 2137 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 C4orf51C9J302 202 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 INS-IGF2F8WCM5 200 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 CCL21O00585 134 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 SOCS3O14543 225 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 TIMM17BO60830 172 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 IAPPP10997 89 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 SLC25A16P16260 332 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 CCL1P22362 96 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 DEFB110Q30KQ9 67 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 GDF5OSQ5U4N7 250 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 MIC13Q5XKP0 118 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 Q6JHZ5 121 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 CEMP1Q6PRD7 247 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 UBALD1Q8TB05 177 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 DEFB127Q9H1M4 99 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZNF355PQ9NSJ1 428 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 TIMM8BQ9Y5J9 83 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 TTC28Q96AY4 2481 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 TRBV27A0A0K0K1C4 114 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 A0A1B0GUT8 65 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 EFNA2O43921 213 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 IGLV2-8P01709 118 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 CKS2P33552 79 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 TFF3Q07654 80 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 ATP1A1-AS1Q5TC04 95 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms