RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 PCLOQ9Y6V0 5065 aa10.09□□□□□ -0.79
UBE2D3-228ENST00000508974 IGKV3D-20A0A0C4DH25 116 aa10.09□□□□□ -0.79
UBE2D3-228ENST00000508974 M0R036 132 aa10.09□□□□□ -0.79
UBE2D3-228ENST00000508974 RS1O15537 224 aa10.09□□□□□ -0.79
UBE2D3-228ENST00000508974 S100A4P26447 101 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-228ENST00000508974 SLC25A29Q8N8R3 303 aa10.09□□□□□ -0.79
UBE2D3-228ENST00000508974 LY96Q9Y6Y9 160 aa10.09□□□□□ -0.79
UBE2D3-228ENST00000508974 FABP5P3A8MUU1 101 aa10.08□□□□□ -0.8
UBE2D3-228ENST00000508974 KRTAP10-2P60368 255 aa10.08□□□□□ -0.8
UBE2D3-228ENST00000508974 UBE2G1P62253 170 aa10.08□□□□□ -0.8
UBE2D3-228ENST00000508974 STOML3Q8TAV4 291 aa10.08□□□□□ -0.8
UBE2D3-228ENST00000508974 FAM213BQ8TBF2 198 aa10.08□□□□□ -0.8
UBE2D3-228ENST00000508974 HIST1H2BAQ96A08 127 aa10.08□□□□□ -0.8
UBE2D3-228ENST00000508974 ZC2HC1AQ96GY0 325 aa10.08□□□□□ -0.8
UBE2D3-228ENST00000508974 ZNF471Q9BX82 626 aaPredicted RBP10.08□□□□□ -0.8
UBE2D3-228ENST00000508974 B4DEV8 164 aa10.07□□□□□ -0.8
UBE2D3-228ENST00000508974 H3BVH4 76 aa10.07□□□□□ -0.8
UBE2D3-228ENST00000508974 FUSP35637 526 aaKnown RBP eCLIP10.07□□□□□ -0.8
UBE2D3-228ENST00000508974 ASIPP42127 132 aa10.07□□□□□ -0.8
UBE2D3-228ENST00000508974 ZNF345Q14585 488 aa10.07□□□□□ -0.8
UBE2D3-228ENST00000508974 Q6ZRN7 208 aaPredicted RBP10.07□□□□□ -0.8
UBE2D3-228ENST00000508974 NKX6-2Q9C056 277 aaPredicted RBP10.07□□□□□ -0.8
UBE2D3-228ENST00000508974 TMSB15BA0A087X1C1 80 aa10.06□□□□□ -0.8
UBE2D3-228ENST00000508974 KANTRA0A1W2PQU2 76 aa10.06□□□□□ -0.8
UBE2D3-228ENST00000508974 GRIFINA4D1Z8 144 aa10.06□□□□□ -0.8
UBE2D3-228ENST00000508974 BCL2L11O43521 198 aa10.06□□□□□ -0.8
UBE2D3-228ENST00000508974 PAGE4O60829 102 aa10.06□□□□□ -0.8
UBE2D3-228ENST00000508974 SH2D1AO60880 128 aa10.06□□□□□ -0.8
UBE2D3-228ENST00000508974 CRIP1P50238 77 aa10.06□□□□□ -0.8
UBE2D3-228ENST00000508974 LGALSLQ3ZCW2 172 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-228ENST00000508974 SFT2D1Q8WV19 159 aa10.06□□□□□ -0.8
UBE2D3-228ENST00000508974 FMC1Q96HJ9 113 aa10.06□□□□□ -0.8
UBE2D3-228ENST00000508974 PRADC1Q9BSG0 188 aa10.06□□□□□ -0.8
UBE2D3-228ENST00000508974 TRAV9-2A0A087WT02 112 aa10.05□□□□□ -0.8
UBE2D3-228ENST00000508974 HMSDA8MTL9 139 aa10.05□□□□□ -0.8
UBE2D3-228ENST00000508974 EVI2AP22794 236 aa10.05□□□□□ -0.8
UBE2D3-228ENST00000508974 AKR1C3P42330 323 aa10.05□□□□□ -0.8
UBE2D3-228ENST00000508974 RHOHQ15669 191 aa10.05□□□□□ -0.8
UBE2D3-228ENST00000508974 JPT2Q9H910 190 aa10.05□□□□□ -0.8
UBE2D3-228ENST00000508974 RYR1P21817 5038 aa10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 A0A0D9SG52 128 aa10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 TRBV6-4A0A1B0GX49 114 aa10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 KRBOX1C9JBD0 128 aa10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 PFDN1O60925 122 aa10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 CRYGDP07320 174 aa10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 SEC11BP0C7V7 166 aa10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 DNAH10OSP0CZ25 163 aa10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 BTF3P20290 206 aaKnown RBP10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 Q6ZSN1 163 aa10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 PARLQ9H300 379 aa10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 MSRB1Q9NZV6 116 aa10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 ZFP30Q9Y2G7 519 aa10.04□□□□□ -0.8
UBE2D3-228ENST00000508974 ERVFC1-1P60608 527 aa10.03□□□□□ -0.8
UBE2D3-228ENST00000508974 OR10J3Q5JRS4 329 aa10.03□□□□□ -0.8
UBE2D3-228ENST00000508974 FAM162BQ5T6X4 162 aa10.03□□□□□ -0.8
UBE2D3-228ENST00000508974 SH2D6Q7Z4S9 175 aa10.03□□□□□ -0.8
UBE2D3-228ENST00000508974 LRP1BQ9NZR2 4599 aa10.02□□□□□ -0.8
UBE2D3-228ENST00000508974 SCO2A0A1W2PP80 73 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 GAGE12JA6NER3 117 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 UMAD1C9J7I0 102 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 CIDEAO60543 219 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 LTAP01374 205 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 ARMS2P0C7Q2 107 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 MGST1P10620 155 aaKnown RBP10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 GAGE1Q13065 139 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 GAGE4Q13068 117 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 GAGE5Q13069 117 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 GAGE13Q4V321 117 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 TMUB2Q71RG4 321 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 NFE4Q86UQ8 179 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 MBD3L1Q8WWY6 194 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 PTH2Q96A98 100 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 SAMD10Q9BYL1 202 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 IL36BQ9NZH7 164 aa10.02□□□□□ -0.81
UBE2D3-228ENST00000508974 HSPG2P98160 4391 aa10.01□□□□□ -0.81
UBE2D3-228ENST00000508974 TRAV8-6A0A0B4J262 113 aa10.01□□□□□ -0.81
UBE2D3-228ENST00000508974 IGHV3-38A0A0C4DH36 116 aa10.01□□□□□ -0.81
UBE2D3-228ENST00000508974 A8MWV9 139 aa10.01□□□□□ -0.81
UBE2D3-228ENST00000508974 IGHV3-30P01768 117 aa10.01□□□□□ -0.81
UBE2D3-228ENST00000508974 IGHV3-33P01772 117 aa10.01□□□□□ -0.81
UBE2D3-228ENST00000508974 H2AFB1P0C5Y9 115 aa10.01□□□□□ -0.81
UBE2D3-228ENST00000508974 IGHV3-30-3P0DP02 117 aa10.01□□□□□ -0.81
UBE2D3-228ENST00000508974 IGHV3-30-5P0DP03 117 aa10.01□□□□□ -0.81
UBE2D3-228ENST00000508974 FAM74A4Q5TZK3 123 aa10.01□□□□□ -0.81
UBE2D3-228ENST00000508974 ATP6V0E2Q8NHE4 81 aa10.01□□□□□ -0.81
UBE2D3-228ENST00000508974 M0R381 172 aa10□□□□□ -0.81
UBE2D3-228ENST00000508974 EREGO14944 169 aa10□□□□□ -0.81
UBE2D3-228ENST00000508974 TPT1P13693 172 aaKnown RBP10□□□□□ -0.81
UBE2D3-228ENST00000508974 ZNF674Q2M3X9 581 aa10□□□□□ -0.81
UBE2D3-228ENST00000508974 C14orf178Q8N769 122 aaPredicted RBP10□□□□□ -0.81
UBE2D3-228ENST00000508974 MAPKAPK5-AS1Q8N8E1 139 aa10□□□□□ -0.81
UBE2D3-228ENST00000508974 SYT8Q8NBV8 401 aa10□□□□□ -0.81
UBE2D3-228ENST00000508974 TCEAL7Q9BRU2 100 aa10□□□□□ -0.81
UBE2D3-228ENST00000508974 KRTAP4-5Q9BYR2 181 aa10□□□□□ -0.81
UBE2D3-228ENST00000508974 Q9HAA7 133 aa10□□□□□ -0.81
UBE2D3-228ENST00000508974 Q9UF83 564 aa10□□□□□ -0.81
UBE2D3-228ENST00000508974 PHLDA3Q9Y5J5 127 aa10□□□□□ -0.81
UBE2D3-228ENST00000508974 DNAH5Q8TE73 4624 aa10□□□□□ -0.81
UBE2D3-228ENST00000508974 A0A087WWL8 130 aa9.99□□□□□ -0.81
UBE2D3-228ENST00000508974 TRBV6-1A0A0K0K1D8 114 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms