RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 SNAPC5O75971 98 aa1.95□□□□□ -2.1
CHD1-205ENST00000508756 IL5P05113 134 aa1.95□□□□□ -2.1
CHD1-205ENST00000508756 S100A1P23297 94 aa1.95□□□□□ -2.1
CHD1-205ENST00000508756 TET1Q8NFU7 2136 aa1.95□□□□□ -2.1
CHD1-205ENST00000508756 VSTM2AQ8TAG5 236 aa1.95□□□□□ -2.1
CHD1-205ENST00000508756 TMEM242Q9NWH2 141 aa1.95□□□□□ -2.1
CHD1-205ENST00000508756 NDUFA12Q9UI09 145 aa1.95□□□□□ -2.1
CHD1-205ENST00000508756 BOKQ9UMX3 212 aaPredicted RBP1.95□□□□□ -2.1
CHD1-205ENST00000508756 SPEF2Q9C093 1822 aa1.94□□□□□ -2.1
CHD1-205ENST00000508756 MYOM3Q5VTT5 1437 aa1.94□□□□□ -2.1
CHD1-205ENST00000508756 A0A0J9YY99 117 aa1.94□□□□□ -2.1
CHD1-205ENST00000508756 AKAIN1P0CW23 69 aa1.94□□□□□ -2.1
CHD1-205ENST00000508756 SCIMPQ6UWF3 145 aa1.94□□□□□ -2.1
CHD1-205ENST00000508756 TMEM2Q9UHN6 1383 aa1.94□□□□□ -2.1
CHD1-205ENST00000508756 MYH9P35579 1960 aaKnown RBP1.93□□□□□ -2.1
CHD1-205ENST00000508756 NUPR2A6NF83 97 aa1.93□□□□□ -2.1
CHD1-205ENST00000508756 IFNGP01579 166 aa1.93□□□□□ -2.1
CHD1-205ENST00000508756 FXYD4P59646 89 aa1.93□□□□□ -2.1
CHD1-205ENST00000508756 LSM10Q969L4 123 aaKnown RBP1.93□□□□□ -2.1
CHD1-205ENST00000508756 AGPAT4-IT1Q9H0P7 198 aa1.93□□□□□ -2.1
CHD1-205ENST00000508756 RP1L1Q8IWN7 2480 aaPredicted RBP1.93□□□□□ -2.1
CHD1-205ENST00000508756 NCOA6Q14686 2063 aaPredicted RBP1.92□□□□□ -2.1
CHD1-205ENST00000508756 PHRF1Q9P1Y6 1649 aaKnown RBP1.92□□□□□ -2.1
CHD1-205ENST00000508756 IGKV2-40A0A087WW87 121 aaPredicted RBP1.92□□□□□ -2.1
CHD1-205ENST00000508756 SNCGO76070 127 aa1.92□□□□□ -2.1
CHD1-205ENST00000508756 IGKV2D-40P01614 121 aaPredicted RBP1.92□□□□□ -2.1
CHD1-205ENST00000508756 APODP05090 189 aa1.92□□□□□ -2.1
CHD1-205ENST00000508756 PDE6GP18545 87 aa1.92□□□□□ -2.1
CHD1-205ENST00000508756 SPATA45Q537H7 98 aa1.92□□□□□ -2.1
CHD1-205ENST00000508756 OR2T2Q6IF00 324 aa1.92□□□□□ -2.1
CHD1-205ENST00000508756 LINC00299Q6ZSB3 139 aa1.92□□□□□ -2.1
CHD1-205ENST00000508756 TMEM203Q969S6 136 aa1.92□□□□□ -2.1
CHD1-205ENST00000508756 ODF3Q96PU9 254 aa1.92□□□□□ -2.1
CHD1-205ENST00000508756 ADGRB1O14514 1584 aa1.92□□□□□ -2.1
CHD1-205ENST00000508756 CTTNBP2Q8WZ74 1663 aa1.91□□□□□ -2.1
CHD1-205ENST00000508756 UHRF1BP1LA0JNW5 1464 aa1.91□□□□□ -2.1
CHD1-205ENST00000508756 LOC101927531A0A1B0GV80 90 aa1.91□□□□□ -2.1
CHD1-205ENST00000508756 ATP6V1G2-DDX39BF2Z307 99 aa1.91□□□□□ -2.1
CHD1-205ENST00000508756 RPL37AP61513 92 aaKnown RBP1.91□□□□□ -2.1
CHD1-205ENST00000508756 UBE2G1P62253 170 aa1.91□□□□□ -2.1
CHD1-205ENST00000508756 PP6455Q8WZ26 134 aa1.91□□□□□ -2.1
CHD1-205ENST00000508756 SPTSSAQ969W0 71 aa1.91□□□□□ -2.1
CHD1-205ENST00000508756 CYSTM1Q9H1C7 97 aa1.91□□□□□ -2.1
CHD1-205ENST00000508756 NALCNQ8IZF0 1738 aa1.91□□□□□ -2.1
CHD1-205ENST00000508756 ADGRB2O60241 1585 aa1.9□□□□□ -2.1
CHD1-205ENST00000508756 IGLV3-32A0A0A0MS00 114 aa1.9□□□□□ -2.11
CHD1-205ENST00000508756 CXorf51AA0A1B0GTR3 108 aa1.9□□□□□ -2.11
CHD1-205ENST00000508756 IGKV2-29A2NJV5 120 aaPredicted RBP1.9□□□□□ -2.11
CHD1-205ENST00000508756 GYPBP06028 91 aa1.9□□□□□ -2.11
CHD1-205ENST00000508756 S100PP25815 95 aa1.9□□□□□ -2.11
CHD1-205ENST00000508756 SBSPONQ8IVN8 264 aa1.9□□□□□ -2.11
CHD1-205ENST00000508756 C10orf105Q8TEF2 133 aa1.9□□□□□ -2.11
CHD1-205ENST00000508756 TSKUQ8WUA8 353 aa1.9□□□□□ -2.11
CHD1-205ENST00000508756 SNRNP25Q9BV90 132 aaKnown RBP1.9□□□□□ -2.11
CHD1-205ENST00000508756 ATG5Q9H1Y0 275 aa1.9□□□□□ -2.11
CHD1-205ENST00000508756 CORTO00230 105 aa1.89□□□□□ -2.11
CHD1-205ENST00000508756 SNRNP200O75643 2136 aaKnown RBP1.89□□□□□ -2.11
CHD1-205ENST00000508756 IGHV3-30P01768 117 aa1.89□□□□□ -2.11
CHD1-205ENST00000508756 CCKP06307 115 aa1.89□□□□□ -2.11
CHD1-205ENST00000508756 IGHV3-30-5P0DP03 117 aa1.89□□□□□ -2.11
CHD1-205ENST00000508756 LYNX1P0DP58 116 aa1.89□□□□□ -2.11
CHD1-205ENST00000508756 IFI27L1Q96BM0 104 aa1.89□□□□□ -2.11
CHD1-205ENST00000508756 C12orf57Q99622 126 aa1.89□□□□□ -2.11
CHD1-205ENST00000508756 ATG2AQ2TAZ0 1938 aa1.89□□□□□ -2.11
CHD1-205ENST00000508756 WDR7Q9Y4E6 1490 aa1.88□□□□□ -2.11
CHD1-205ENST00000508756 ZGRF1Q86YA3 2104 aa1.88□□□□□ -2.11
CHD1-205ENST00000508756 E9PCH4 1651 aa1.88□□□□□ -2.11
CHD1-205ENST00000508756 MIF4GDA9UHW6 222 aaKnown RBP1.88□□□□□ -2.11
CHD1-205ENST00000508756 FGF7P21781 194 aa1.88□□□□□ -2.11
CHD1-205ENST00000508756 WHAMMP3Q1A5X7 153 aa1.88□□□□□ -2.11
CHD1-205ENST00000508756 PLPP5Q8NEB5 264 aa1.88□□□□□ -2.11
CHD1-205ENST00000508756 PPDPFLQ8WWR9 84 aa1.88□□□□□ -2.11
CHD1-205ENST00000508756 MRPL35Q9NZE8 188 aaKnown RBP1.88□□□□□ -2.11
CHD1-205ENST00000508756 AKAP11Q9UKA4 1901 aa1.87□□□□□ -2.11
CHD1-205ENST00000508756 NDUFB6O95139 128 aa1.87□□□□□ -2.11
CHD1-205ENST00000508756 SPANXN1Q5VSR9 72 aa1.87□□□□□ -2.11
CHD1-205ENST00000508756 SMG6Q86US8 1419 aaKnown RBP1.87□□□□□ -2.11
CHD1-205ENST00000508756 DEFB119Q8N690 84 aa1.87□□□□□ -2.11
CHD1-205ENST00000508756 SPTSSBQ8NFR3 76 aa1.87□□□□□ -2.11
CHD1-205ENST00000508756 DMAC1Q96GE9 116 aa1.87□□□□□ -2.11
CHD1-205ENST00000508756 RERGLQ9H628 205 aa1.87□□□□□ -2.11
CHD1-205ENST00000508756 PTPRMP28827 1452 aa1.87□□□□□ -2.11
CHD1-205ENST00000508756 TRBV10-1A0A0K0K1A3 114 aa1.86□□□□□ -2.11
CHD1-205ENST00000508756 RBM3P98179 157 aaKnown RBP1.86□□□□□ -2.11
CHD1-205ENST00000508756 RPL7L1Q6DKI1 246 aaKnown RBP1.86□□□□□ -2.11
CHD1-205ENST00000508756 Q86TA4 180 aa1.86□□□□□ -2.11
CHD1-205ENST00000508756 C10orf82Q8WW14 230 aa1.86□□□□□ -2.11
CHD1-205ENST00000508756 TMEM141Q96I45 108 aa1.86□□□□□ -2.11
CHD1-205ENST00000508756 C22orf24Q9Y442 160 aa1.86□□□□□ -2.11
CHD1-205ENST00000508756 SERP1Q9Y6X1 66 aa1.86□□□□□ -2.11
CHD1-205ENST00000508756 FLG2Q5D862 2391 aaPredicted RBP1.86□□□□□ -2.11
CHD1-205ENST00000508756 PLXNA2O75051 1894 aa1.86□□□□□ -2.11
CHD1-205ENST00000508756 CACNA1BQ00975 2339 aa1.85□□□□□ -2.11
CHD1-205ENST00000508756 MUC22E2RYF6 1773 aaPredicted RBP1.85□□□□□ -2.11
CHD1-205ENST00000508756 TCRBV3S1A0A5B6 114 aa1.85□□□□□ -2.11
CHD1-205ENST00000508756 MCRIP1C9JLW8 97 aa1.85□□□□□ -2.11
CHD1-205ENST00000508756 PIPP12273 146 aaPredicted RBP1.85□□□□□ -2.11
CHD1-205ENST00000508756 NPC2P61916 151 aa1.85□□□□□ -2.11
CHD1-205ENST00000508756 SLC48A1Q6P1K1 146 aa1.85□□□□□ -2.11
CHD1-205ENST00000508756 NAA60Q9H7X0 242 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms