RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 LAGE3Q14657 143 aa8.38□□□□□ -1.07
SH3RF1-203ENST00000508685 UFSP1Q6NVU6 142 aa8.38□□□□□ -1.07
SH3RF1-203ENST00000508685 C10orf99Q6UWK7 81 aa8.38□□□□□ -1.07
SH3RF1-203ENST00000508685 UNQ9165/PRO28630Q6UXU0 137 aa8.38□□□□□ -1.07
SH3RF1-203ENST00000508685 MRAP2Q96G30 205 aa8.38□□□□□ -1.07
SH3RF1-203ENST00000508685 DKK2Q9UBU2 259 aa8.38□□□□□ -1.07
SH3RF1-203ENST00000508685 IGLV2-18A0A075B6J9 118 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 K7EP34 96 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 C8orf86Q6ZUL3 223 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 C9orf139Q6ZV77 190 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 LINC00477Q96M19 166 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 HHLA3Q9XRX5 114 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 ACANP16112 2415 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 F8P00451 2351 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 TRAV8-2A0A0B4J237 113 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 A0A0G2JLM5 398 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 SMIM13P0DJ93 91 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 FXYD7P58549 80 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 TAL2Q16559 108 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 TMEM158Q8WZ71 300 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 VPREB3Q9UKI3 123 aa8.37□□□□□ -1.07
SH3RF1-203ENST00000508685 H3BUA1 57 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 HOXA3O43365 443 aaPredicted RBP8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 BRI3O95415 125 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 SMIM17P0DL12 118 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 ERASQ7Z444 233 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 RNF182Q8N6D2 247 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 USMG5Q96IX5 58 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 C18orf15Q96N68 181 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 DUX5Q96PT3 197 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 IGHV7-4-1A0A0J9YVY3 117 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 OVOL1O14753 267 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 RNF151Q2KHN1 245 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 SPANXN1Q5VSR9 72 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 Q6YL49 198 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 PCP2Q8IVA1 136 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 VPS25Q9BRG1 176 aa8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 TEP1Q99973 2627 aaKnown RBP8.36□□□□□ -1.07
SH3RF1-203ENST00000508685 H3BUT2 72 aa8.35□□□□□ -1.07
SH3RF1-203ENST00000508685 PPP1R17O96001 155 aa8.35□□□□□ -1.07
SH3RF1-203ENST00000508685 MED14OSP0DP75 135 aa8.35□□□□□ -1.07
SH3RF1-203ENST00000508685 PLNP26678 52 aa8.35□□□□□ -1.07
SH3RF1-203ENST00000508685 COTL1Q14019 142 aa8.35□□□□□ -1.07
SH3RF1-203ENST00000508685 NRACQ8N912 160 aa8.35□□□□□ -1.07
SH3RF1-203ENST00000508685 C16orf92Q96LL3 132 aa8.35□□□□□ -1.07
SH3RF1-203ENST00000508685 A0A087WX48 190 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 TRBV7-9A0A0J9YWB2 115 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 A0A1W2PPM0 123 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 FABP2P12104 132 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 PSMB8P28062 276 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 FOXE3Q13461 319 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 ORMDL2Q53FV1 153 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 C20orf78Q9BR46 151 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 TM2D2Q9BX73 214 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 C11orf21Q9P2W6 132 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 TRAV21A0A0B4J279 112 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 NDUFA4O00483 81 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 GLMPQ8WWB7 406 aa8.34□□□□□ -1.07
SH3RF1-203ENST00000508685 MTORP42345 2549 aa8.33□□□□□ -1.08
SH3RF1-203ENST00000508685 LINC01549A6NIU2 74 aa8.33□□□□□ -1.08
SH3RF1-203ENST00000508685 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.33□□□□□ -1.08
SH3RF1-203ENST00000508685 ZC2HC1BQ5TFG8 222 aa8.33□□□□□ -1.08
SH3RF1-203ENST00000508685 WFDC3Q8IUB2 231 aa8.33□□□□□ -1.08
SH3RF1-203ENST00000508685 OR10J6PQ8NGY7 276 aa8.33□□□□□ -1.08
SH3RF1-203ENST00000508685 CHAC1Q9BUX1 264 aa8.33□□□□□ -1.08
SH3RF1-203ENST00000508685 LINC01619G3V211 115 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 M0R381 172 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 GAS8-AS1O95177 125 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 ZNF702PQ9H963 129 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 ZNF580Q9UK33 172 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 UFC1Q9Y3C8 167 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 SPCS1Q9Y6A9 102 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 SELENOKQ9Y6D0 94 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 TRBV25-1A0A075B6N4 114 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 H7C1H1 209 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 GATA1P15976 413 aaPredicted RBP8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 EDN2P20800 178 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 SAMD5Q5TGI4 173 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 SMIM2Q9BVW6 85 aa8.32□□□□□ -1.08
SH3RF1-203ENST00000508685 GCSHP23434 173 aa8.31□□□□□ -1.08
SH3RF1-203ENST00000508685 TM4SF20Q53R12 229 aa8.31□□□□□ -1.08
SH3RF1-203ENST00000508685 CEND1Q8N111 149 aa8.31□□□□□ -1.08
SH3RF1-203ENST00000508685 JMJD8Q96S16 334 aa8.31□□□□□ -1.08
SH3RF1-203ENST00000508685 DPH3P1Q9H4G8 78 aa8.31□□□□□ -1.08
SH3RF1-203ENST00000508685 TMEM160Q9NX00 188 aa8.31□□□□□ -1.08
SH3RF1-203ENST00000508685 IGKV2D-26A0A0A0MRZ7 120 aa8.3□□□□□ -1.08
SH3RF1-203ENST00000508685 ASIPP42127 132 aa8.3□□□□□ -1.08
SH3RF1-203ENST00000508685 SAMD13Q5VXD3 122 aa8.3□□□□□ -1.08
SH3RF1-203ENST00000508685 NEGR1Q7Z3B1 354 aa8.3□□□□□ -1.08
SH3RF1-203ENST00000508685 GTSCR1Q86UQ5 136 aa8.3□□□□□ -1.08
SH3RF1-203ENST00000508685 GPHB5Q86YW7 130 aa8.3□□□□□ -1.08
SH3RF1-203ENST00000508685 MRPL35Q9NZE8 188 aaKnown RBP8.3□□□□□ -1.08
SH3RF1-203ENST00000508685 SETD2Q9BYW2 2564 aaPredicted RBP8.3□□□□□ -1.08
SH3RF1-203ENST00000508685 F8VRH5 84 aa8.3□□□□□ -1.08
SH3RF1-203ENST00000508685 C21orf62-AS1Q17RA5 79 aa8.3□□□□□ -1.08
SH3RF1-203ENST00000508685 APRG1Q8IVJ8 170 aa8.3□□□□□ -1.08
SH3RF1-203ENST00000508685 RAB37Q96AX2 223 aa8.3□□□□□ -1.08
SH3RF1-203ENST00000508685 IGKV3-7A0A075B6H7 116 aa8.29□□□□□ -1.08
SH3RF1-203ENST00000508685 G3V4G9 280 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms