RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 MYOZ3Q8TDC0 251 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 TTTY13Q9BZ97 58 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 H3BVH4 76 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 NDUFA4O00483 81 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 RNF151Q2KHN1 245 aa12.81□□□□□ -0.36
LIN54-204ENST00000505397 GTSCR1Q86UQ5 136 aa12.81□□□□□ -0.36
LIN54-204ENST00000505397 MRPL35Q9NZE8 188 aaKnown RBP12.81□□□□□ -0.36
LIN54-204ENST00000505397 A0A087WX48 190 aa12.81□□□□□ -0.36
LIN54-204ENST00000505397 H3BUA1 57 aa12.81□□□□□ -0.36
LIN54-204ENST00000505397 FAM19A4Q96LR4 140 aa12.81□□□□□ -0.36
LIN54-204ENST00000505397 CHAC1Q9BUX1 264 aa12.81□□□□□ -0.36
LIN54-204ENST00000505397 TRBV25-1A0A075B6N4 114 aa12.8□□□□□ -0.36
LIN54-204ENST00000505397 A0A1W2PPM0 123 aa12.8□□□□□ -0.36
LIN54-204ENST00000505397 TRBV12-3P01733 135 aa12.8□□□□□ -0.36
LIN54-204ENST00000505397 KRTAP1-3Q8IUG1 177 aa12.8□□□□□ -0.36
LIN54-204ENST00000505397 OVOL1O14753 267 aa12.8□□□□□ -0.36
LIN54-204ENST00000505397 SMIM2Q9BVW6 85 aa12.8□□□□□ -0.36
LIN54-204ENST00000505397 FSHBP01225 129 aa12.79□□□□□ -0.36
LIN54-204ENST00000505397 FXYD2P54710 66 aa12.79□□□□□ -0.36
LIN54-204ENST00000505397 RAB37Q96AX2 223 aa12.79□□□□□ -0.36
LIN54-204ENST00000505397 NAA38Q9BRA0 125 aaKnown RBP12.79□□□□□ -0.36
LIN54-204ENST00000505397 PF4V1P10720 104 aa12.79□□□□□ -0.36
LIN54-204ENST00000505397 APRG1Q8IVJ8 170 aa12.79□□□□□ -0.36
LIN54-204ENST00000505397 TM2D2Q9BX73 214 aa12.79□□□□□ -0.36
LIN54-204ENST00000505397 TMEM160Q9NX00 188 aa12.79□□□□□ -0.36
LIN54-204ENST00000505397 HELZ2Q9BYK8 2649 aaKnown RBP12.78□□□□□ -0.36
LIN54-204ENST00000505397 TRAV21A0A0B4J279 112 aa12.78□□□□□ -0.36
LIN54-204ENST00000505397 SMIM13P0DJ93 91 aa12.78□□□□□ -0.36
LIN54-204ENST00000505397 TRAV12-1A0A0B4J245 112 aa12.78□□□□□ -0.36
LIN54-204ENST00000505397 K7ERU9 68 aa12.78□□□□□ -0.36
LIN54-204ENST00000505397 Q6ZS46 218 aa12.78□□□□□ -0.36
LIN54-204ENST00000505397 USMG5Q96IX5 58 aa12.78□□□□□ -0.36
LIN54-204ENST00000505397 MED14OSP0DP75 135 aa12.77□□□□□ -0.36
LIN54-204ENST00000505397 OR10J6PQ8NGY7 276 aa12.77□□□□□ -0.36
LIN54-204ENST00000505397 PHLDA1Q8WV24 401 aaPredicted RBP12.77□□□□□ -0.36
LIN54-204ENST00000505397 RASL10AQ92737 203 aa12.77□□□□□ -0.36
LIN54-204ENST00000505397 GCSHP23434 173 aa12.77□□□□□ -0.37
LIN54-204ENST00000505397 TM4SF20Q53R12 229 aa12.77□□□□□ -0.37
LIN54-204ENST00000505397 C20orf78Q9BR46 151 aa12.77□□□□□ -0.37
LIN54-204ENST00000505397 VPREB3Q9UKI3 123 aa12.77□□□□□ -0.37
LIN54-204ENST00000505397 PLNP26678 52 aa12.76□□□□□ -0.37
LIN54-204ENST00000505397 OR5A1Q8NGJ0 315 aa12.76□□□□□ -0.37
LIN54-204ENST00000505397 K7EMI3 77 aa12.76□□□□□ -0.37
LIN54-204ENST00000505397 CEND1Q8N111 149 aa12.76□□□□□ -0.37
LIN54-204ENST00000505397 MAPKAPK5-AS1Q8N8E1 139 aa12.76□□□□□ -0.37
LIN54-204ENST00000505397 WFDC11Q8NEX6 87 aa12.76□□□□□ -0.37
LIN54-204ENST00000505397 TOMM6Q96B49 74 aa12.76□□□□□ -0.37
LIN54-204ENST00000505397 NBPF19A0A087WUL8 3843 aa12.75□□□□□ -0.37
LIN54-204ENST00000505397 TRBV7-9A0A0J9YWB2 115 aa12.75□□□□□ -0.37
LIN54-204ENST00000505397 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.75□□□□□ -0.37
LIN54-204ENST00000505397 SUMO2P61956 95 aaKnown RBP12.75□□□□□ -0.37
LIN54-204ENST00000505397 ORMDL2Q53FV1 153 aa12.75□□□□□ -0.37
LIN54-204ENST00000505397 Q6YL49 198 aa12.75□□□□□ -0.37
LIN54-204ENST00000505397 DPH3P1Q9H4G8 78 aa12.75□□□□□ -0.37
LIN54-204ENST00000505397 SPCS1Q9Y6A9 102 aa12.75□□□□□ -0.37
LIN54-204ENST00000505397 SAMD5Q5TGI4 173 aa12.75□□□□□ -0.37
LIN54-204ENST00000505397 ZNF580Q9UK33 172 aa12.75□□□□□ -0.37
LIN54-204ENST00000505397 ASIPP42127 132 aa12.75□□□□□ -0.37
LIN54-204ENST00000505397 ANXA2RQ3ZCQ2 193 aa12.75□□□□□ -0.37
LIN54-204ENST00000505397 VPS25Q9BRG1 176 aa12.75□□□□□ -0.37
LIN54-204ENST00000505397 F8VRH5 84 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 H7C1H1 209 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 J3KRW8 73 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 M0R381 172 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 DEFB1P60022 68 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 TMEM95Q3KNT9 176 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 NEGR1Q7Z3B1 354 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 POM121L12Q8N7R1 296 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 TEX15Q9BXT5 2789 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 IGLV1-40P01703 118 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 IGHV3-11P01762 117 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 FABP2P12104 132 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 TAL2Q16559 108 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 KLK15Q9H2R5 256 aa12.74□□□□□ -0.37
LIN54-204ENST00000505397 ITPR3Q14573 2671 aa12.73□□□□□ -0.37
LIN54-204ENST00000505397 CCDC168Q8NDH2 2452 aa12.73□□□□□ -0.37
LIN54-204ENST00000505397 SAP30O75446 220 aa12.73□□□□□ -0.37
LIN54-204ENST00000505397 NEXN-AS1Q8NBZ9 246 aa12.73□□□□□ -0.37
LIN54-204ENST00000505397 PHLDA3Q9Y5J5 127 aa12.73□□□□□ -0.37
LIN54-204ENST00000505397 HOXA3O43365 443 aaPredicted RBP12.72□□□□□ -0.37
LIN54-204ENST00000505397 SPRY2O43597 315 aa12.72□□□□□ -0.37
LIN54-204ENST00000505397 RNASE3P12724 160 aaKnown RBP12.72□□□□□ -0.37
LIN54-204ENST00000505397 CFHR3Q02985 330 aa12.72□□□□□ -0.37
LIN54-204ENST00000505397 TEX29Q8N6K0 151 aa12.72□□□□□ -0.37
LIN54-204ENST00000505397 C14orf178Q8N769 122 aaPredicted RBP12.72□□□□□ -0.37
LIN54-204ENST00000505397 RPL39LQ96EH5 51 aaKnown RBP12.72□□□□□ -0.37
LIN54-204ENST00000505397 NXPH4O95158 308 aa12.72□□□□□ -0.37
LIN54-204ENST00000505397 S100A4P26447 101 aaKnown RBP12.72□□□□□ -0.37
LIN54-204ENST00000505397 RNASE4P34096 147 aaKnown RBP12.71□□□□□ -0.37
LIN54-204ENST00000505397 LCNL1Q6ZST4 164 aa12.71□□□□□ -0.37
LIN54-204ENST00000505397 F6UB75 175 aa12.71□□□□□ -0.38
LIN54-204ENST00000505397 LINC01619G3V211 115 aa12.71□□□□□ -0.38
LIN54-204ENST00000505397 K7ERJ3 54 aa12.71□□□□□ -0.38
LIN54-204ENST00000505397 SCGB3A1Q96QR1 104 aa12.71□□□□□ -0.38
LIN54-204ENST00000505397 GNRH2O43555 120 aa12.7□□□□□ -0.38
LIN54-204ENST00000505397 CHTOPQ9Y3Y2 248 aaKnown RBP12.7□□□□□ -0.38
LIN54-204ENST00000505397 SELENOKQ9Y6D0 94 aa12.7□□□□□ -0.38
LIN54-204ENST00000505397 G3V4G9 280 aa12.7□□□□□ -0.38
LIN54-204ENST00000505397 RHPN1-AS1Q9BWJ2 59 aa12.7□□□□□ -0.38
LIN54-204ENST00000505397 NHP2Q9NX24 153 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms