RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 HYDINQ4G0P3 5121 aa6.81□□□□□ -1.32
TPM3-218ENST00000505010 HUWE1Q7Z6Z7 4374 aaKnown RBP6.81□□□□□ -1.32
TPM3-218ENST00000505010 LYSTQ99698 3801 aa6.81□□□□□ -1.32
TPM3-218ENST00000505010 LOC102724200A0A096LPH7 203 aaPredicted RBP6.81□□□□□ -1.32
TPM3-218ENST00000505010 A0A1B0GXF2 115 aa6.81□□□□□ -1.32
TPM3-218ENST00000505010 SNURFLB1AK76 121 aa6.81□□□□□ -1.32
TPM3-218ENST00000505010 MED14OSP0DP75 135 aa6.81□□□□□ -1.32
TPM3-218ENST00000505010 FOXA3P55318 350 aaPredicted RBP6.81□□□□□ -1.32
TPM3-218ENST00000505010 HBBP68871 147 aa6.81□□□□□ -1.32
TPM3-218ENST00000505010 TDRG1Q3Y452 100 aa6.81□□□□□ -1.32
TPM3-218ENST00000505010 WDR73Q6P4I2 378 aa6.81□□□□□ -1.32
TPM3-218ENST00000505010 ZNF575Q86XF7 245 aa6.81□□□□□ -1.32
TPM3-218ENST00000505010 TMEM256Q8N2U0 113 aa6.81□□□□□ -1.32
TPM3-218ENST00000505010 OR10AG1Q8NH19 301 aa6.81□□□□□ -1.32
TPM3-218ENST00000505010 FRZBQ92765 325 aa6.81□□□□□ -1.32
TPM3-218ENST00000505010 IGHV3-16A0A0C4DH30 117 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 F2Z2F3 143 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 SNAI2O43623 268 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 S100A8P05109 93 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 GIG44P09565 113 aaPredicted RBP6.8□□□□□ -1.32
TPM3-218ENST00000505010 OR5AL1P0C617 328 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 APOC4P55056 127 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 CACNG7P62955 275 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 ZNF415Q09FC8 603 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 TWIST1Q15672 202 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 COX19Q49B96 90 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 DNLZQ5SXM8 178 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 RASL11AQ6T310 242 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 C1orf158Q8N1D5 194 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 CSTL1Q9H114 145 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 PHLDA3Q9Y5J5 127 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 TRAPPC1Q9Y5R8 145 aa6.8□□□□□ -1.32
TPM3-218ENST00000505010 CSMD3Q7Z407 3707 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 A0A1B0GW15 77 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 C1orf196B1AJZ1 125 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 M0R381 172 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 SPRY2O43597 315 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 HLA-DQA1P01909 254 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 MT-ND6P03923 174 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 TRGC2P03986 189 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 PRM2P04554 102 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 IGHV4-30-4P0DP06 118 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 RNASE3P12724 160 aaKnown RBP6.79□□□□□ -1.32
TPM3-218ENST00000505010 FABP9Q0Z7S8 132 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 SPANXN1Q5VSR9 72 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 TMEM136Q6ZRR5 245 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 MUC7Q8TAX7 377 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 LINC00467Q9BRT7 94 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 SSBP4Q9BWG4 385 aaPredicted RBP6.79□□□□□ -1.32
TPM3-218ENST00000505010 GNB1LQ9BYB4 327 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 CNFNQ9BYD5 112 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 MRPL18Q9H0U6 180 aaKnown RBP6.79□□□□□ -1.32
TPM3-218ENST00000505010 MDFICQ9P1T7 246 aa6.79□□□□□ -1.32
TPM3-218ENST00000505010 MUC4Q99102 2169 aa6.78□□□□□ -1.32
TPM3-218ENST00000505010 LCE6AA0A183 80 aa6.78□□□□□ -1.32
TPM3-218ENST00000505010 NTF3P20783 257 aa6.78□□□□□ -1.32
TPM3-218ENST00000505010 RAB5BP61020 215 aa6.78□□□□□ -1.32
TPM3-218ENST00000505010 ZFP82Q8N141 532 aa6.78□□□□□ -1.32
TPM3-218ENST00000505010 CSNK1G2-AS1Q8NCQ2 148 aa6.78□□□□□ -1.32
TPM3-218ENST00000505010 C9orf85Q96MD7 179 aa6.78□□□□□ -1.32
TPM3-218ENST00000505010 SCRT2Q9NQ03 307 aa6.78□□□□□ -1.32
TPM3-218ENST00000505010 KIR2DL5BA0A0G2JN68 375 aa6.77□□□□□ -1.33
TPM3-218ENST00000505010 KIR2DL5BA0A0G2JPC4 375 aa6.77□□□□□ -1.33
TPM3-218ENST00000505010 APCSP02743 223 aa6.77□□□□□ -1.33
TPM3-218ENST00000505010 SLAQ13239 276 aa6.77□□□□□ -1.33
TPM3-218ENST00000505010 SMIM15Q7Z3B0 74 aa6.77□□□□□ -1.33
TPM3-218ENST00000505010 KIR2DL5AQ8N109 375 aa6.77□□□□□ -1.33
TPM3-218ENST00000505010 GATD1Q8NB37 220 aa6.77□□□□□ -1.33
TPM3-218ENST00000505010 SYT8Q8NBV8 401 aa6.77□□□□□ -1.33
TPM3-218ENST00000505010 KIR2DL5BQ8NHK3 375 aa6.77□□□□□ -1.33
TPM3-218ENST00000505010 MSRB1Q9NZV6 116 aa6.77□□□□□ -1.33
TPM3-218ENST00000505010 STAB2Q8WWQ8 2551 aa6.77□□□□□ -1.33
TPM3-218ENST00000505010 IGHV4-4A0A075B6R2 117 aa6.76□□□□□ -1.33
TPM3-218ENST00000505010 NXPH4O95158 308 aa6.76□□□□□ -1.33
TPM3-218ENST00000505010 TRGC1P0CF51 173 aa6.76□□□□□ -1.33
TPM3-218ENST00000505010 AZU1P20160 251 aa6.76□□□□□ -1.33
TPM3-218ENST00000505010 DEFB135Q30KP9 77 aa6.76□□□□□ -1.33
TPM3-218ENST00000505010 ZNF705AQ6ZN79 300 aaPredicted RBP6.76□□□□□ -1.33
TPM3-218ENST00000505010 C11orf72Q8NBR9 251 aa6.76□□□□□ -1.33
TPM3-218ENST00000505010 TMEM263Q8WUH6 116 aaKnown RBP6.76□□□□□ -1.33
TPM3-218ENST00000505010 AP1S3Q96PC3 154 aa6.76□□□□□ -1.33
TPM3-218ENST00000505010 RCHY1Q96PM5 261 aa6.76□□□□□ -1.33
TPM3-218ENST00000505010 GSN-AS1Q9NRJ2 163 aa6.76□□□□□ -1.33
TPM3-218ENST00000505010 PCLOQ9Y6V0 5065 aa6.75□□□□□ -1.33
TPM3-218ENST00000505010 UBE2CO00762 179 aa6.75□□□□□ -1.33
TPM3-218ENST00000505010 PHOX2AO14813 284 aa6.75□□□□□ -1.33
TPM3-218ENST00000505010 RRN3P1Q2M238 152 aa6.75□□□□□ -1.33
TPM3-218ENST00000505010 KIAA1644Q3SXP7 199 aa6.75□□□□□ -1.33
TPM3-218ENST00000505010 ZNF493Q6ZR52 646 aa6.75□□□□□ -1.33
TPM3-218ENST00000505010 AMN1Q8IY45 258 aa6.75□□□□□ -1.33
TPM3-218ENST00000505010 RNASE8Q8TDE3 154 aaKnown RBP6.75□□□□□ -1.33
TPM3-218ENST00000505010 C16orf74Q96GX8 76 aa6.75□□□□□ -1.33
TPM3-218ENST00000505010 TMEM191AQ9H0A3 160 aa6.75□□□□□ -1.33
TPM3-218ENST00000505010 A8MZ25 164 aa6.74□□□□□ -1.33
TPM3-218ENST00000505010 M0R2P5 195 aa6.74□□□□□ -1.33
TPM3-218ENST00000505010 MGPP08493 103 aa6.74□□□□□ -1.33
TPM3-218ENST00000505010 SMIM17P0DL12 118 aa6.74□□□□□ -1.33
TPM3-218ENST00000505010 EVI2AP22794 236 aa6.74□□□□□ -1.33
TPM3-218ENST00000505010 ZNF876PQ49A33 203 aa6.74□□□□□ -1.33
TPM3-218ENST00000505010 DMRTA1Q5VZB9 504 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms