RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 KIR2DL4Q99706 377 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 PRSS2P07478 247 aa5.69□□□□□ -1.5
PDGFC-203ENST00000502773 LAGE3Q14657 143 aa5.69□□□□□ -1.5
PDGFC-203ENST00000502773 IGLV1-40P01703 118 aa5.69□□□□□ -1.5
PDGFC-203ENST00000502773 TRACP01848 142 aa5.69□□□□□ -1.5
PDGFC-203ENST00000502773 NEGR1Q7Z3B1 354 aa5.69□□□□□ -1.5
PDGFC-203ENST00000502773 UBE2E2Q96LR5 201 aa5.69□□□□□ -1.5
PDGFC-203ENST00000502773 FOXC2Q99958 501 aa5.69□□□□□ -1.5
PDGFC-203ENST00000502773 CSDC2Q9Y534 153 aaKnown RBP5.69□□□□□ -1.5
PDGFC-203ENST00000502773 LINC00322Q6ZN03 302 aaPredicted RBP5.69□□□□□ -1.5
PDGFC-203ENST00000502773 RNF152Q8N8N0 203 aa5.69□□□□□ -1.5
PDGFC-203ENST00000502773 JMJD8Q96S16 334 aa5.69□□□□□ -1.5
PDGFC-203ENST00000502773 SPEGQ15772 3267 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 IGHV3OR16-10A0A075B7F0 116 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 LGALS1P09382 135 aaKnown RBP5.68□□□□□ -1.5
PDGFC-203ENST00000502773 LINC01545Q5VT33 79 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 ZNF747Q9BV97 191 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 KLK15Q9H2R5 256 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 INSL3P51460 131 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 DEFB113Q30KQ7 82 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 C19orf54Q5BKX5 351 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 FOXI2Q6ZQN5 318 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 PRADC1Q9BSG0 188 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 SPANXB1Q9NS25 103 aaPredicted RBP5.68□□□□□ -1.5
PDGFC-203ENST00000502773 SMAD5-AS1Q9Y6J3 95 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 IGHV3-35A0A0C4DH35 117 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 GDF5OSQ5U4N7 250 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 HRCT1Q6UXD1 115 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 WNK2Q9Y3S1 2297 aa5.68□□□□□ -1.5
PDGFC-203ENST00000502773 C2orf70A6NJV1 201 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 SEC61GP60059 68 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 SIGLEC8Q9NYZ4 499 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 A0A1W2PPR1 153 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 PLNP26678 52 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 LOC107984640A0A0U1RRK4 108 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 LINC00694P0DN24 101 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 IGHV4-38-2P0DP08 117 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 XGP55808 180 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 LINC00173Q6ZV60 143 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 Q8TAT8 98 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 DYNLRB2Q8TF09 96 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 SPATA25Q9BR10 227 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 RNF114Q9Y508 228 aa5.67□□□□□ -1.5
PDGFC-203ENST00000502773 DPM2O94777 84 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 FRMD6-AS1P0C7T7 363 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 PLA2G5P39877 138 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 CRIP1P50238 77 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 BRK1Q8WUW1 75 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 CLPSL1A2RUU4 121 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 IFI27P40305 119 aaPredicted RBP5.66□□□□□ -1.5
PDGFC-203ENST00000502773 ERCC8Q13216 396 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 S100A7L2Q5SY68 101 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 Q6YL49 198 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 PCP2Q8IVA1 136 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 PIFOQ8TCI5 191 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 TRAV12-3A0A0B4J271 114 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 IGHV3-66A0A0C4DH42 116 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 FAM236AA0A1B0GUQ0 79 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 FAM236BA0A1B0GV22 79 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 RNASE4P34096 147 aaKnown RBP5.66□□□□□ -1.5
PDGFC-203ENST00000502773 FXYD2P54710 66 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 LINC00310P59036 64 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 ZC2HC1BQ5TFG8 222 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 CHCHD5Q9BSY4 110 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 TMEM213A2RRL7 107 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 VCYO14598 125 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 IGHV3-11P01762 117 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 HLA-DRB4P13762 266 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 HLA-DRB4X5D2U9 266 aa5.66□□□□□ -1.5
PDGFC-203ENST00000502773 DEFB112Q30KQ8 113 aa5.65□□□□□ -1.5
PDGFC-203ENST00000502773 SCRT2Q9NQ03 307 aa5.65□□□□□ -1.5
PDGFC-203ENST00000502773 ABCA4P78363 2273 aa5.65□□□□□ -1.5
PDGFC-203ENST00000502773 IGLL5B9A064 214 aa5.65□□□□□ -1.51
PDGFC-203ENST00000502773 IGKCP01834 107 aa5.65□□□□□ -1.51
PDGFC-203ENST00000502773 FAM19A5Q7Z5A7 132 aaPredicted RBP5.65□□□□□ -1.51
PDGFC-203ENST00000502773 NTN5Q8WTR8 489 aaPredicted RBP5.65□□□□□ -1.51
PDGFC-203ENST00000502773 LINC01546A6NGU7 62 aa5.65□□□□□ -1.51
PDGFC-203ENST00000502773 TMEM141Q96I45 108 aa5.65□□□□□ -1.51
PDGFC-203ENST00000502773 IGHV3OR16-13A0A075B7E8 117 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 IGHV3-74A0A0B4J1X5 117 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 F5H697 171 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 LINC01619G3V211 115 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 RS1O15537 224 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 PSMB8P28062 276 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 PIK3CD-AS1Q5SR53 167 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 C2orf82Q6UX34 121 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 RNF182Q8N6D2 247 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 PSMG3-AS1Q96PY0 264 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 IGHV3-49A0A0A0MS15 119 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 MGPP08493 103 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 TAL2Q16559 108 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 C12orf74Q32Q52 190 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 SCGB3A1Q96QR1 104 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 TRAV12-1A0A0B4J245 112 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 HERVK_113P63121 156 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 TMEM170BQ5T4T1 132 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 TEN1Q86WV5 123 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 DNAJC30Q96LL9 226 aa5.64□□□□□ -1.51
PDGFC-203ENST00000502773 IGHV3OR16-8A0A075B7F1 116 aa5.63□□□□□ -1.51
PDGFC-203ENST00000502773 NPYP01303 97 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms