RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 STHQ8IWL8 128 aa7.62□□□□□ -1.19
HDAC3-214ENST00000495485 SYT8Q8NBV8 401 aa7.62□□□□□ -1.19
HDAC3-214ENST00000495485 C12orf57Q99622 126 aa7.62□□□□□ -1.19
HDAC3-214ENST00000495485 MAP6D1Q9H9H5 199 aa7.62□□□□□ -1.19
HDAC3-214ENST00000495485 SELENOKQ9Y6D0 94 aa7.62□□□□□ -1.19
HDAC3-214ENST00000495485 IGHV1OR15-1A0A075B7D0 117 aa7.61□□□□□ -1.19
HDAC3-214ENST00000495485 TRAV12-3A0A0B4J271 114 aa7.61□□□□□ -1.19
HDAC3-214ENST00000495485 H3BVH4 76 aa7.61□□□□□ -1.19
HDAC3-214ENST00000495485 ZNF324O75467 553 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-214ENST00000495485 PPP1R17O96001 155 aa7.61□□□□□ -1.19
HDAC3-214ENST00000495485 CD7P09564 240 aa7.61□□□□□ -1.19
HDAC3-214ENST00000495485 SMIM17P0DL12 118 aa7.61□□□□□ -1.19
HDAC3-214ENST00000495485 PRR9Q5T870 116 aa7.61□□□□□ -1.19
HDAC3-214ENST00000495485 TMEM256Q8N2U0 113 aa7.61□□□□□ -1.19
HDAC3-214ENST00000495485 PRSS3P2Q8NHM4 247 aa7.61□□□□□ -1.19
HDAC3-214ENST00000495485 PRELID3AQ96N28 172 aa7.61□□□□□ -1.19
HDAC3-214ENST00000495485 C11orf21Q9P2W6 132 aa7.61□□□□□ -1.19
HDAC3-214ENST00000495485 MEGF8Q7Z7M0 2845 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 IGKV3-20P01619 116 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 IGLV1-51P01701 117 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 LINC00614P0C842 121 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 AMTP48728 403 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 DEFB1P60022 68 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 SSTP61278 116 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 S100A12P80511 92 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 SPINK13Q1W4C9 94 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 MUC21Q5SSG8 566 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 RNASEKQ6P5S7 137 aaKnown RBP7.6□□□□□ -1.19
HDAC3-214ENST00000495485 FA2HQ7L5A8 372 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 NIT1Q86X76 327 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 MRAP2Q96G30 205 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 AP1S3Q96PC3 154 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 ZNF256Q9Y2P7 627 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-214ENST00000495485 TIMM8BQ9Y5J9 83 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-214ENST00000495485 U3KQK5 164 aa7.6□□□□□ -1.19
HDAC3-214ENST00000495485 KNCNA6PVL3 124 aa7.59□□□□□ -1.19
HDAC3-214ENST00000495485 D6R8Y8 96 aa7.59□□□□□ -1.19
HDAC3-214ENST00000495485 INSP01308 110 aa7.59□□□□□ -1.19
HDAC3-214ENST00000495485 JOSD1Q15040 202 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-214ENST00000495485 IQCJQ1A5X6 159 aa7.59□□□□□ -1.19
HDAC3-214ENST00000495485 MRPL51Q4U2R6 128 aaKnown RBP7.59□□□□□ -1.19
HDAC3-214ENST00000495485 KPRPQ5T749 579 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-214ENST00000495485 SAMD5Q5TGI4 173 aa7.59□□□□□ -1.19
HDAC3-214ENST00000495485 AMN1Q8IY45 258 aa7.59□□□□□ -1.19
HDAC3-214ENST00000495485 MAP1LC3AQ9H492 121 aa7.59□□□□□ -1.19
HDAC3-214ENST00000495485 DPH3P1Q9H4G8 78 aa7.59□□□□□ -1.19
HDAC3-214ENST00000495485 MUC21A0A0G2JKD1 596 aa7.58□□□□□ -1.2
HDAC3-214ENST00000495485 MUC21A0A140T8X8 626 aa7.58□□□□□ -1.2
HDAC3-214ENST00000495485 IFITM10A6NMD0 228 aa7.58□□□□□ -1.2
HDAC3-214ENST00000495485 M0R2Z0 102 aa7.58□□□□□ -1.2
HDAC3-214ENST00000495485 GNRH2O43555 120 aa7.58□□□□□ -1.2
HDAC3-214ENST00000495485 AMTNQ6UX39 209 aa7.58□□□□□ -1.2
HDAC3-214ENST00000495485 OR10AG1Q8NH19 301 aa7.58□□□□□ -1.2
HDAC3-214ENST00000495485 LINC00467Q9BRT7 94 aa7.58□□□□□ -1.2
HDAC3-214ENST00000495485 C1QTNF4Q9BXJ3 329 aa7.58□□□□□ -1.2
HDAC3-214ENST00000495485 NXT2Q9NPJ8 142 aaKnown RBP7.58□□□□□ -1.2
HDAC3-214ENST00000495485 SCRT2Q9NQ03 307 aa7.58□□□□□ -1.2
HDAC3-214ENST00000495485 TP53TG3Q9ULZ0 132 aa7.58□□□□□ -1.2
HDAC3-214ENST00000495485 TRAV12-2A0A075B6T6 113 aa7.57□□□□□ -1.2
HDAC3-214ENST00000495485 CBY3A6NI87 242 aa7.57□□□□□ -1.2
HDAC3-214ENST00000495485 M0R381 172 aa7.57□□□□□ -1.2
HDAC3-214ENST00000495485 EGFEM1PQ0D2K5 195 aa7.57□□□□□ -1.2
HDAC3-214ENST00000495485 ZNF575Q86XF7 245 aa7.57□□□□□ -1.2
HDAC3-214ENST00000495485 NIT2Q9NQR4 276 aa7.57□□□□□ -1.2
HDAC3-214ENST00000495485 AP5S1Q9NUS5 200 aa7.57□□□□□ -1.2
HDAC3-214ENST00000495485 SCGB1D1O95968 90 aa7.56□□□□□ -1.2
HDAC3-214ENST00000495485 RNASE3P12724 160 aaKnown RBP7.56□□□□□ -1.2
HDAC3-214ENST00000495485 ZNF415Q09FC8 603 aa7.56□□□□□ -1.2
HDAC3-214ENST00000495485 BEAN1Q3B7T3 259 aa7.56□□□□□ -1.2
HDAC3-214ENST00000495485 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
HDAC3-214ENST00000495485 MORN3Q6PF18 240 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-214ENST00000495485 GTSCR1Q86UQ5 136 aa7.56□□□□□ -1.2
HDAC3-214ENST00000495485 RCHY1Q96PM5 261 aa7.56□□□□□ -1.2
HDAC3-214ENST00000495485 LINC01587Q99440 93 aa7.56□□□□□ -1.2
HDAC3-214ENST00000495485 SPXQ9BT56 116 aa7.56□□□□□ -1.2
HDAC3-214ENST00000495485 TMEM208Q9BTX3 173 aa7.56□□□□□ -1.2
HDAC3-214ENST00000495485 MSRB1Q9NZV6 116 aa7.56□□□□□ -1.2
HDAC3-214ENST00000495485 HSPB8Q9UJY1 196 aa7.56□□□□□ -1.2
HDAC3-214ENST00000495485 IGHV3-16A0A0C4DH30 117 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 NUPR1O60356 82 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 NXPH4O95158 308 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 IGLL1P15814 213 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 EVI2AP22794 236 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 G0S2P27469 103 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 ODF3L2Q3SX64 289 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 PYY3Q5JQD4 70 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 Q8N1Y9 231 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 PTH2Q96A98 100 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 RNF185Q96GF1 192 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 C9orf85Q96MD7 179 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 NDUFAF3Q9BU61 184 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 GSN-AS1Q9NRJ2 163 aa7.55□□□□□ -1.2
HDAC3-214ENST00000495485 PRKDCP78527 4128 aaKnown RBP7.55□□□□□ -1.2
HDAC3-214ENST00000495485 C20orf202A1L168 122 aa7.54□□□□□ -1.2
HDAC3-214ENST00000495485 PRSS47A8MTI9 375 aa7.54□□□□□ -1.2
HDAC3-214ENST00000495485 K7EMI3 77 aa7.54□□□□□ -1.2
HDAC3-214ENST00000495485 LEPROTL1O95214 131 aa7.54□□□□□ -1.2
HDAC3-214ENST00000495485 TNFRSF6BO95407 300 aa7.54□□□□□ -1.2
HDAC3-214ENST00000495485 FXYD7P58549 80 aa7.54□□□□□ -1.2
HDAC3-214ENST00000495485 LINC00310P59036 64 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms