RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 SPANXN1Q5VSR9 72 aa8.48□□□□□ -1.05
HDLBP-245ENST00000494862 SMIM15Q7Z3B0 74 aa8.48□□□□□ -1.05
HDLBP-245ENST00000494862 AMN1Q8IY45 258 aa8.48□□□□□ -1.05
HDLBP-245ENST00000494862 LINC00518Q8N0U6 118 aa8.48□□□□□ -1.05
HDLBP-245ENST00000494862 OR10D4PQ8NGN7 298 aa8.48□□□□□ -1.05
HDLBP-245ENST00000494862 CITED1Q99966 193 aa8.48□□□□□ -1.05
HDLBP-245ENST00000494862 FAM110AQ9BQ89 295 aa8.48□□□□□ -1.05
HDLBP-245ENST00000494862 MSRB1Q9NZV6 116 aa8.48□□□□□ -1.05
HDLBP-245ENST00000494862 U3KQK5 164 aa8.48□□□□□ -1.05
HDLBP-245ENST00000494862 IGHV1OR15-1A0A075B7D0 117 aa8.47□□□□□ -1.05
HDLBP-245ENST00000494862 SMIM6P0DI80 62 aa8.47□□□□□ -1.05
HDLBP-245ENST00000494862 RNASE3P12724 160 aaKnown RBP8.47□□□□□ -1.05
HDLBP-245ENST00000494862 BEAN1Q3B7T3 259 aa8.47□□□□□ -1.05
HDLBP-245ENST00000494862 MRPL51Q4U2R6 128 aaKnown RBP8.47□□□□□ -1.05
HDLBP-245ENST00000494862 RNF185Q96GF1 192 aa8.47□□□□□ -1.05
HDLBP-245ENST00000494862 PACRGQ96M98 296 aaPredicted RBP8.47□□□□□ -1.05
HDLBP-245ENST00000494862 PHLDA3Q9Y5J5 127 aa8.47□□□□□ -1.05
HDLBP-245ENST00000494862 TIMM8BQ9Y5J9 83 aaPredicted RBP8.47□□□□□ -1.05
HDLBP-245ENST00000494862 CUBNO60494 3623 aa8.47□□□□□ -1.05
HDLBP-245ENST00000494862 CRXO43186 299 aaPredicted RBP8.46□□□□□ -1.06
HDLBP-245ENST00000494862 NXPH4O95158 308 aa8.46□□□□□ -1.06
HDLBP-245ENST00000494862 CD7P09564 240 aa8.46□□□□□ -1.06
HDLBP-245ENST00000494862 RAB4AP20338 218 aa8.46□□□□□ -1.06
HDLBP-245ENST00000494862 FXYD7P58549 80 aa8.46□□□□□ -1.06
HDLBP-245ENST00000494862 STHQ8IWL8 128 aa8.46□□□□□ -1.06
HDLBP-245ENST00000494862 ORMDL3Q8N138 153 aa8.46□□□□□ -1.06
HDLBP-245ENST00000494862 RCHY1Q96PM5 261 aa8.46□□□□□ -1.06
HDLBP-245ENST00000494862 IGHV3-16A0A0C4DH30 117 aa8.45□□□□□ -1.06
HDLBP-245ENST00000494862 PPBPP02775 128 aa8.45□□□□□ -1.06
HDLBP-245ENST00000494862 CKS2P33552 79 aa8.45□□□□□ -1.06
HDLBP-245ENST00000494862 TRPT1Q86TN4 253 aaKnown RBP8.45□□□□□ -1.06
HDLBP-245ENST00000494862 NIT1Q86X76 327 aa8.45□□□□□ -1.06
HDLBP-245ENST00000494862 C9orf85Q96MD7 179 aa8.45□□□□□ -1.06
HDLBP-245ENST00000494862 PRELID3AQ96N28 172 aa8.45□□□□□ -1.06
HDLBP-245ENST00000494862 C20orf144Q9BQM9 153 aa8.45□□□□□ -1.06
HDLBP-245ENST00000494862 SAMD10Q9BYL1 202 aa8.45□□□□□ -1.06
HDLBP-245ENST00000494862 TRGV11A0A075B6L2 103 aa8.44□□□□□ -1.06
HDLBP-245ENST00000494862 D6R8Y8 96 aa8.44□□□□□ -1.06
HDLBP-245ENST00000494862 M0R381 172 aa8.44□□□□□ -1.06
HDLBP-245ENST00000494862 RBMY1A1P0DJD3 496 aaKnown RBP8.44□□□□□ -1.06
HDLBP-245ENST00000494862 RBMY1CP0DJD4 496 aa8.44□□□□□ -1.06
HDLBP-245ENST00000494862 EVI2AP22794 236 aa8.44□□□□□ -1.06
HDLBP-245ENST00000494862 INSL3P51460 131 aa8.44□□□□□ -1.06
HDLBP-245ENST00000494862 RBMY1FQ15415 496 aaKnown RBP8.44□□□□□ -1.06
HDLBP-245ENST00000494862 C9orf66Q5T8R8 295 aa8.44□□□□□ -1.06
HDLBP-245ENST00000494862 CHCHD1Q96BP2 118 aaKnown RBP8.44□□□□□ -1.06
HDLBP-245ENST00000494862 MDFIQ99750 246 aa8.44□□□□□ -1.06
HDLBP-245ENST00000494862 LINC00467Q9BRT7 94 aa8.44□□□□□ -1.06
HDLBP-245ENST00000494862 C19orf73Q9NVV2 129 aa8.44□□□□□ -1.06
HDLBP-245ENST00000494862 JMJD1CQ15652 2540 aa8.44□□□□□ -1.06
HDLBP-245ENST00000494862 INSP01308 110 aa8.43□□□□□ -1.06
HDLBP-245ENST00000494862 AMTP48728 403 aa8.43□□□□□ -1.06
HDLBP-245ENST00000494862 RNASEKQ6P5S7 137 aaKnown RBP8.43□□□□□ -1.06
HDLBP-245ENST00000494862 Q8N1Y9 231 aa8.43□□□□□ -1.06
HDLBP-245ENST00000494862 URB1-AS1Q96HZ7 61 aa8.43□□□□□ -1.06
HDLBP-245ENST00000494862 C12orf57Q99622 126 aa8.43□□□□□ -1.06
HDLBP-245ENST00000494862 LAMTOR2Q9Y2Q5 125 aa8.43□□□□□ -1.06
HDLBP-245ENST00000494862 CBY3A6NI87 242 aa8.42□□□□□ -1.06
HDLBP-245ENST00000494862 SMKR1H3BMG3 65 aa8.42□□□□□ -1.06
HDLBP-245ENST00000494862 SPRY2O43597 315 aa8.42□□□□□ -1.06
HDLBP-245ENST00000494862 HSBP1O75506 76 aa8.42□□□□□ -1.06
HDLBP-245ENST00000494862 LINC00614P0C842 121 aa8.42□□□□□ -1.06
HDLBP-245ENST00000494862 PMCHP20382 165 aa8.42□□□□□ -1.06
HDLBP-245ENST00000494862 SYT8Q8NBV8 401 aa8.42□□□□□ -1.06
HDLBP-245ENST00000494862 AP1S3Q96PC3 154 aa8.42□□□□□ -1.06
HDLBP-245ENST00000494862 DPH3P1Q9H4G8 78 aa8.42□□□□□ -1.06
HDLBP-245ENST00000494862 MDFICQ9P1T7 246 aa8.42□□□□□ -1.06
HDLBP-245ENST00000494862 SORL1Q92673 2214 aa8.42□□□□□ -1.06
HDLBP-245ENST00000494862 AGRNO00468 2067 aa8.41□□□□□ -1.06
HDLBP-245ENST00000494862 NCR2O95944 276 aa8.41□□□□□ -1.06
HDLBP-245ENST00000494862 NPYP01303 97 aa8.41□□□□□ -1.06
HDLBP-245ENST00000494862 NUTF2P61970 127 aaKnown RBP8.41□□□□□ -1.06
HDLBP-245ENST00000494862 JOSD1Q15040 202 aaPredicted RBP8.41□□□□□ -1.06
HDLBP-245ENST00000494862 KRTAP24-1Q3LI83 254 aa8.41□□□□□ -1.06
HDLBP-245ENST00000494862 PYY3Q5JQD4 70 aa8.41□□□□□ -1.06
HDLBP-245ENST00000494862 POM121L12Q8N7R1 296 aa8.41□□□□□ -1.06
HDLBP-245ENST00000494862 MRAP2Q96G30 205 aa8.41□□□□□ -1.06
HDLBP-245ENST00000494862 MCRIP2Q9BUT9 160 aaKnown RBP8.41□□□□□ -1.06
HDLBP-245ENST00000494862 WNK1Q9H4A3 2382 aa8.41□□□□□ -1.06
HDLBP-245ENST00000494862 STAB1Q9NY15 2570 aa8.4□□□□□ -1.06
HDLBP-245ENST00000494862 FA2HQ7L5A8 372 aa8.4□□□□□ -1.06
HDLBP-245ENST00000494862 FAM19A2Q8N3H0 131 aa8.4□□□□□ -1.06
HDLBP-245ENST00000494862 C14orf178Q8N769 122 aaPredicted RBP8.4□□□□□ -1.06
HDLBP-245ENST00000494862 WFDC9Q8NEX5 89 aa8.4□□□□□ -1.06
HDLBP-245ENST00000494862 PRSS3P2Q8NHM4 247 aa8.4□□□□□ -1.06
HDLBP-245ENST00000494862 LINC01587Q99440 93 aa8.4□□□□□ -1.06
HDLBP-245ENST00000494862 ZNF747Q9BV97 191 aa8.4□□□□□ -1.06
HDLBP-245ENST00000494862 MAP1LC3AQ9H492 121 aa8.4□□□□□ -1.06
HDLBP-245ENST00000494862 GSN-AS1Q9NRJ2 163 aa8.4□□□□□ -1.06
HDLBP-245ENST00000494862 LOC389332A0A1B0GUA5 103 aa8.39□□□□□ -1.07
HDLBP-245ENST00000494862 TNFRSF6BO95407 300 aa8.39□□□□□ -1.07
HDLBP-245ENST00000494862 SMIM17P0DL12 118 aa8.39□□□□□ -1.07
HDLBP-245ENST00000494862 ZNF415Q09FC8 603 aa8.39□□□□□ -1.07
HDLBP-245ENST00000494862 Q6ZWC4 215 aa8.39□□□□□ -1.07
HDLBP-245ENST00000494862 SPATA3Q8NHX4 192 aa8.39□□□□□ -1.07
HDLBP-245ENST00000494862 PTH2Q96A98 100 aa8.39□□□□□ -1.07
HDLBP-245ENST00000494862 XCL2Q9UBD3 114 aa8.39□□□□□ -1.07
HDLBP-245ENST00000494862 KIF25-AS1Q9Y6Z4 181 aa8.39□□□□□ -1.07
HDLBP-245ENST00000494862 GAS8-AS1O95177 125 aa8.38□□□□□ -1.07
HDLBP-245ENST00000494862 GATA1P15976 413 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms