RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 GRIFINA4D1Z8 144 aa11.07□□□□□ -0.64
LIME1-209ENST00000494776 PGPEP1LA6NFU8 196 aa11.07□□□□□ -0.64
LIME1-209ENST00000494776 H3BVH4 76 aa11.07□□□□□ -0.64
LIME1-209ENST00000494776 ZNF506Q5JVG8 444 aa11.07□□□□□ -0.64
LIME1-209ENST00000494776 PRR27Q6MZM9 219 aa11.07□□□□□ -0.64
LIME1-209ENST00000494776 DERL1Q9BUN8 251 aa11.07□□□□□ -0.64
LIME1-209ENST00000494776 MED9Q9NWA0 146 aa11.07□□□□□ -0.64
LIME1-209ENST00000494776 MRPL23Q16540 153 aaKnown RBP11.06□□□□□ -0.64
LIME1-209ENST00000494776 ESRGQ1W209 222 aa11.06□□□□□ -0.64
LIME1-209ENST00000494776 LINC01559Q495D7 138 aa11.06□□□□□ -0.64
LIME1-209ENST00000494776 PTH2Q96A98 100 aa11.06□□□□□ -0.64
LIME1-209ENST00000494776 IL36BQ9NZH7 164 aa11.06□□□□□ -0.64
LIME1-209ENST00000494776 MUC4Q99102 2169 aa11.06□□□□□ -0.64
LIME1-209ENST00000494776 RS1O15537 224 aa11.05□□□□□ -0.64
LIME1-209ENST00000494776 CIDEAO60543 219 aa11.05□□□□□ -0.64
LIME1-209ENST00000494776 ARMS2P0C7Q2 107 aa11.05□□□□□ -0.64
LIME1-209ENST00000494776 MGST1P10620 155 aaKnown RBP11.05□□□□□ -0.64
LIME1-209ENST00000494776 GYPEP15421 78 aa11.05□□□□□ -0.64
LIME1-209ENST00000494776 CENPWQ5EE01 88 aa11.05□□□□□ -0.64
LIME1-209ENST00000494776 CFAP126Q5VTH2 177 aa11.05□□□□□ -0.64
LIME1-209ENST00000494776 SYT8Q8NBV8 401 aa11.05□□□□□ -0.64
LIME1-209ENST00000494776 MLST8Q9BVC4 326 aa11.05□□□□□ -0.64
LIME1-209ENST00000494776 VPS13DQ5THJ4 4388 aa11.04□□□□□ -0.64
LIME1-209ENST00000494776 KMT2AQ03164 3969 aa11.04□□□□□ -0.64
LIME1-209ENST00000494776 IGHV3-73A0A0B4J1V6 119 aa11.04□□□□□ -0.64
LIME1-209ENST00000494776 SRIP30626 198 aa11.04□□□□□ -0.64
LIME1-209ENST00000494776 GNG4P50150 75 aa11.04□□□□□ -0.64
LIME1-209ENST00000494776 DNLZQ5SXM8 178 aa11.04□□□□□ -0.64
LIME1-209ENST00000494776 ZNRF2Q8NHG8 242 aa11.04□□□□□ -0.64
LIME1-209ENST00000494776 PHLDA3Q9Y5J5 127 aa11.04□□□□□ -0.64
LIME1-209ENST00000494776 RAB19A4D1S5 217 aa11.03□□□□□ -0.64
LIME1-209ENST00000494776 A8MWV9 139 aa11.03□□□□□ -0.64
LIME1-209ENST00000494776 K7EQD1 137 aa11.03□□□□□ -0.64
LIME1-209ENST00000494776 NEGR1Q7Z3B1 354 aa11.03□□□□□ -0.64
LIME1-209ENST00000494776 DAZAP1Q96EP5 407 aaKnown RBP11.03□□□□□ -0.64
LIME1-209ENST00000494776 Q9H8V8 135 aa11.03□□□□□ -0.64
LIME1-209ENST00000494776 RBFOX3A6NFN3 312 aa11.02□□□□□ -0.65
LIME1-209ENST00000494776 GATA1P15976 413 aaPredicted RBP11.02□□□□□ -0.65
LIME1-209ENST00000494776 RPL19P84098 196 aaKnown RBP11.02□□□□□ -0.65
LIME1-209ENST00000494776 PIK3CD-AS1Q5SR53 167 aa11.02□□□□□ -0.65
LIME1-209ENST00000494776 DMRTA1Q5VZB9 504 aa11.02□□□□□ -0.65
LIME1-209ENST00000494776 PRADC1Q9BSG0 188 aa11.02□□□□□ -0.65
LIME1-209ENST00000494776 MRPS16Q9Y3D3 137 aaKnown RBP11.02□□□□□ -0.65
LIME1-209ENST00000494776 M0R381 172 aa11.01□□□□□ -0.65
LIME1-209ENST00000494776 SMIM12Q96EX1 92 aa11.01□□□□□ -0.65
LIME1-209ENST00000494776 NACAE9PAV3 2078 aa11□□□□□ -0.65
LIME1-209ENST00000494776 LOC100131303A0A0U1RQF7 123 aa11□□□□□ -0.65
LIME1-209ENST00000494776 NBDYA0A0U1RRE5 68 aa11□□□□□ -0.65
LIME1-209ENST00000494776 RHOHQ15669 191 aa11□□□□□ -0.65
LIME1-209ENST00000494776 SOHLH1Q5JUK2 328 aa11□□□□□ -0.65
LIME1-209ENST00000494776 LYPD5Q6UWN5 251 aa11□□□□□ -0.65
LIME1-209ENST00000494776 Q6ZR54 194 aa11□□□□□ -0.65
LIME1-209ENST00000494776 ZFP82Q8N141 532 aa11□□□□□ -0.65
LIME1-209ENST00000494776 SLC25A29Q8N8R3 303 aa11□□□□□ -0.65
LIME1-209ENST00000494776 LYPD6BQ8NI32 183 aa11□□□□□ -0.65
LIME1-209ENST00000494776 UPK3BQ9BT76 320 aa11□□□□□ -0.65
LIME1-209ENST00000494776 EIF5A2Q9GZV4 153 aaKnown RBP11□□□□□ -0.65
LIME1-209ENST00000494776 PARLQ9H300 379 aa11□□□□□ -0.65
LIME1-209ENST00000494776 BIN3Q9NQY0 253 aa11□□□□□ -0.65
LIME1-209ENST00000494776 TRBV6-4A0A1B0GX49 114 aa10.99□□□□□ -0.65
LIME1-209ENST00000494776 MED14OSP0DP75 135 aa10.99□□□□□ -0.65
LIME1-209ENST00000494776 ZFP2Q6ZN57 461 aa10.99□□□□□ -0.65
LIME1-209ENST00000494776 SH2D6Q7Z4S9 175 aa10.99□□□□□ -0.65
LIME1-209ENST00000494776 ZNF575Q86XF7 245 aa10.99□□□□□ -0.65
LIME1-209ENST00000494776 JPT2Q9H910 190 aa10.99□□□□□ -0.65
LIME1-209ENST00000494776 SCRT2Q9NQ03 307 aa10.99□□□□□ -0.65
LIME1-209ENST00000494776 IGLV2-8P01709 118 aa10.98□□□□□ -0.65
LIME1-209ENST00000494776 CXCL1P09341 107 aa10.98□□□□□ -0.65
LIME1-209ENST00000494776 CEBPGP53567 150 aa10.98□□□□□ -0.65
LIME1-209ENST00000494776 TOR2AQ5JU69 321 aa10.98□□□□□ -0.65
LIME1-209ENST00000494776 C1orf134Q5TEV5 83 aa10.98□□□□□ -0.65
LIME1-209ENST00000494776 FAM74A4Q5TZK3 123 aa10.98□□□□□ -0.65
LIME1-209ENST00000494776 TMEM250H0YL14 139 aa10.97□□□□□ -0.65
LIME1-209ENST00000494776 RHODO00212 210 aa10.97□□□□□ -0.65
LIME1-209ENST00000494776 SIVA1O15304 175 aa10.97□□□□□ -0.65
LIME1-209ENST00000494776 NXPH4O95158 308 aa10.97□□□□□ -0.65
LIME1-209ENST00000494776 P01737 135 aa10.97□□□□□ -0.65
LIME1-209ENST00000494776 TTC32Q5I0X7 151 aa10.97□□□□□ -0.65
LIME1-209ENST00000494776 LINC00336Q6ZUF6 198 aa10.97□□□□□ -0.65
LIME1-209ENST00000494776 OR2D3Q8NGH3 330 aa10.97□□□□□ -0.65
LIME1-209ENST00000494776 SFRP2Q96HF1 295 aa10.97□□□□□ -0.65
LIME1-209ENST00000494776 SAMD10Q9BYL1 202 aa10.97□□□□□ -0.65
LIME1-209ENST00000494776 TRBV20OR9-2A0A075B6H5 130 aa10.96□□□□□ -0.65
LIME1-209ENST00000494776 A0A087WWL8 130 aa10.96□□□□□ -0.65
LIME1-209ENST00000494776 XKRY2A2RUG3 117 aa10.96□□□□□ -0.65
LIME1-209ENST00000494776 RPS20P60866 119 aaKnown RBP10.96□□□□□ -0.65
LIME1-209ENST00000494776 SSTP61278 116 aa10.96□□□□□ -0.65
LIME1-209ENST00000494776 SPANXN1Q5VSR9 72 aa10.96□□□□□ -0.65
LIME1-209ENST00000494776 DNAH6Q9C0G6 4158 aa10.96□□□□□ -0.66
LIME1-209ENST00000494776 MUC21A0A0G2JKD1 596 aa10.95□□□□□ -0.66
LIME1-209ENST00000494776 MUC21A0A140T8X8 626 aa10.95□□□□□ -0.66
LIME1-209ENST00000494776 OR5AL1P0C617 328 aa10.95□□□□□ -0.66
LIME1-209ENST00000494776 TEX261Q6UWH6 196 aa10.95□□□□□ -0.66
LIME1-209ENST00000494776 Q6ZSN1 163 aa10.95□□□□□ -0.66
LIME1-209ENST00000494776 OR10AG1Q8NH19 301 aa10.95□□□□□ -0.66
LIME1-209ENST00000494776 FAM210AQ96ND0 272 aa10.95□□□□□ -0.66
LIME1-209ENST00000494776 TPPP3Q9BW30 176 aa10.95□□□□□ -0.66
LIME1-209ENST00000494776 C19orf71A6NCJ1 209 aa10.94□□□□□ -0.66
LIME1-209ENST00000494776 PRSS29PA6NIE9 313 aa10.94□□□□□ -0.66
LIME1-209ENST00000494776 RTL8CO15255 209 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms