RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 TSKUQ8WUA8 353 aa8.94□□□□□ -0.98
SNX17-208ENST00000493711 CTDSP1Q9GZU7 261 aa8.94□□□□□ -0.98
SNX17-208ENST00000493711 TMSB15BA0A087X1C1 80 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 APOC3P02656 99 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 OR5AL1P0C617 328 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 SPART-AS1P0CW21 52 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 PIK3CD-AS1Q5SR53 167 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 WDR73Q6P4I2 378 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 FER1L6-AS1Q8NA97 138 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 SYT8Q8NBV8 401 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 IL17DQ8TAD2 202 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 C9orf85Q96MD7 179 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 GSN-AS1Q9NRJ2 163 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 MDFICQ9P1T7 246 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 U3KQK5 164 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 V9GYV3 84 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 AGRNO00468 2067 aa8.93□□□□□ -0.98
SNX17-208ENST00000493711 A0A087WWC5 75 aa8.92□□□□□ -0.98
SNX17-208ENST00000493711 GRIFINA4D1Z8 144 aa8.92□□□□□ -0.98
SNX17-208ENST00000493711 M0R2P5 195 aa8.92□□□□□ -0.98
SNX17-208ENST00000493711 ARMS2P0C7Q2 107 aa8.92□□□□□ -0.98
SNX17-208ENST00000493711 FOXA3P55318 350 aaPredicted RBP8.92□□□□□ -0.98
SNX17-208ENST00000493711 RPL19P84098 196 aaKnown RBP8.92□□□□□ -0.98
SNX17-208ENST00000493711 CLRN3Q8NCR9 226 aa8.92□□□□□ -0.98
SNX17-208ENST00000493711 SCRT2Q9NQ03 307 aa8.92□□□□□ -0.98
SNX17-208ENST00000493711 PHLDA3Q9Y5J5 127 aa8.92□□□□□ -0.98
SNX17-208ENST00000493711 PLAC8L1A1L4L8 177 aa8.91□□□□□ -0.98
SNX17-208ENST00000493711 CXorf65A6NEN9 183 aa8.91□□□□□ -0.98
SNX17-208ENST00000493711 SNAI2O43623 268 aa8.91□□□□□ -0.98
SNX17-208ENST00000493711 IGLC6P0CF74 106 aa8.91□□□□□ -0.98
SNX17-208ENST00000493711 RNASE3P12724 160 aaKnown RBP8.91□□□□□ -0.98
SNX17-208ENST00000493711 EMP1P54849 157 aa8.91□□□□□ -0.98
SNX17-208ENST00000493711 CACNG7P62955 275 aa8.91□□□□□ -0.98
SNX17-208ENST00000493711 RNF212Q495C1 297 aa8.91□□□□□ -0.98
SNX17-208ENST00000493711 BORCS7Q96B45 105 aa8.91□□□□□ -0.98
SNX17-208ENST00000493711 NOP10Q9NPE3 64 aaKnown RBP8.91□□□□□ -0.98
SNX17-208ENST00000493711 TMEM242Q9NWH2 141 aa8.91□□□□□ -0.98
SNX17-208ENST00000493711 A0A0J9YWU9 116 aa8.9□□□□□ -0.98
SNX17-208ENST00000493711 H3BVH4 76 aa8.9□□□□□ -0.98
SNX17-208ENST00000493711 SPINK4O60575 86 aa8.9□□□□□ -0.98
SNX17-208ENST00000493711 PRM2P04554 102 aa8.9□□□□□ -0.98
SNX17-208ENST00000493711 ZNF575Q86XF7 245 aa8.9□□□□□ -0.98
SNX17-208ENST00000493711 ZFP82Q8N141 532 aa8.9□□□□□ -0.98
SNX17-208ENST00000493711 RASL10AQ92737 203 aa8.9□□□□□ -0.98
SNX17-208ENST00000493711 IMMP2LQ96T52 175 aa8.9□□□□□ -0.98
SNX17-208ENST00000493711 DKK2Q9UBU2 259 aa8.9□□□□□ -0.98
SNX17-208ENST00000493711 NAT8BQ9UHF3 227 aa8.9□□□□□ -0.98
SNX17-208ENST00000493711 SMIM27A0A1W2PRY6 76 aa8.89□□□□□ -0.99
SNX17-208ENST00000493711 C7orf77A4D0Y5 90 aa8.89□□□□□ -0.99
SNX17-208ENST00000493711 CIDEAO60543 219 aa8.89□□□□□ -0.99
SNX17-208ENST00000493711 CTRLP40313 264 aa8.89□□□□□ -0.99
SNX17-208ENST00000493711 ZNF876PQ49A33 203 aa8.89□□□□□ -0.99
SNX17-208ENST00000493711 FAM222AQ5U5X8 452 aa8.89□□□□□ -0.99
SNX17-208ENST00000493711 SPANXN1Q5VSR9 72 aa8.89□□□□□ -0.99
SNX17-208ENST00000493711 C18orf15Q96N68 181 aa8.89□□□□□ -0.99
SNX17-208ENST00000493711 TPPP3Q9BW30 176 aa8.89□□□□□ -0.99
SNX17-208ENST00000493711 IGHV4-4A0A075B6R2 117 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 TRGV1A0A0A0MS02 117 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 HIGD1CA8MV81 97 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 DEFB4AO15263 64 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 NXPH4O95158 308 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 GZMBP10144 247 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 S100A1P23297 94 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 S100PP25815 95 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 DAD1P61803 113 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 KCNIP4Q6PIL6 250 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 LYZL1Q6UWQ5 148 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 LINC00612Q8N6U2 182 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 C11orf45Q8TAV5 145 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 GTSF1Q8WW33 167 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 CNFNQ9BYD5 112 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 RPS10P5Q9NQ39 176 aa8.88□□□□□ -0.99
SNX17-208ENST00000493711 TRGV2A0A075B6R0 118 aa8.87□□□□□ -0.99
SNX17-208ENST00000493711 TRAV9-1A0A075B6T8 112 aa8.87□□□□□ -0.99
SNX17-208ENST00000493711 A0A1B0GUT8 65 aa8.87□□□□□ -0.99
SNX17-208ENST00000493711 A0A1B0GW15 77 aa8.87□□□□□ -0.99
SNX17-208ENST00000493711 A8MWV9 139 aa8.87□□□□□ -0.99
SNX17-208ENST00000493711 S100A8P05109 93 aa8.87□□□□□ -0.99
SNX17-208ENST00000493711 BTF3L4Q96K17 158 aa8.87□□□□□ -0.99
SNX17-208ENST00000493711 TRGC1P0CF51 173 aa8.86□□□□□ -0.99
SNX17-208ENST00000493711 DEFB130BP0DP73 79 aa8.86□□□□□ -0.99
SNX17-208ENST00000493711 DEFB130AP0DP74 79 aa8.86□□□□□ -0.99
SNX17-208ENST00000493711 RIGQ13278 110 aa8.86□□□□□ -0.99
SNX17-208ENST00000493711 Q6ZTI0 123 aa8.86□□□□□ -0.99
SNX17-208ENST00000493711 SMIM15Q7Z3B0 74 aa8.86□□□□□ -0.99
SNX17-208ENST00000493711 OR10AG1Q8NH19 301 aa8.86□□□□□ -0.99
SNX17-208ENST00000493711 PGLYRP4Q96LB8 373 aa8.86□□□□□ -0.99
SNX17-208ENST00000493711 MRPL16Q9NX20 251 aaKnown RBP8.86□□□□□ -0.99
SNX17-208ENST00000493711 TRAV4A0A0B4J268 109 aa8.85□□□□□ -0.99
SNX17-208ENST00000493711 GAGE12BA1L429 117 aa8.85□□□□□ -0.99
SNX17-208ENST00000493711 M0R381 172 aa8.85□□□□□ -0.99
SNX17-208ENST00000493711 RHODO00212 210 aa8.85□□□□□ -0.99
SNX17-208ENST00000493711 GAGE7O76087 117 aa8.85□□□□□ -0.99
SNX17-208ENST00000493711 ATP5G1P05496 136 aa8.85□□□□□ -0.99
SNX17-208ENST00000493711 GAGE12FP0CL80 117 aa8.85□□□□□ -0.99
SNX17-208ENST00000493711 GAGE12GP0CL81 117 aa8.85□□□□□ -0.99
SNX17-208ENST00000493711 GAGE12IP0CL82 117 aa8.85□□□□□ -0.99
SNX17-208ENST00000493711 ATP5L2Q7Z4Y8 100 aa8.85□□□□□ -0.99
SNX17-208ENST00000493711 NUP35Q8NFH5 326 aa8.85□□□□□ -0.99
SNX17-208ENST00000493711 AP1S3Q96PC3 154 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms