RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 EPDR1Q9UM22 224 aa3.47□□□□□ -1.85
RTN4-215ENST00000491592 CNTRLQ7Z7A1 2325 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 IGHV5-10-1A0A0J9YXX1 117 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 F8W1H4 67 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 H3BUT2 72 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 IGHV3-48P01763 117 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 FOXA3P55318 350 aaPredicted RBP3.46□□□□□ -1.86
RTN4-215ENST00000491592 ERHP84090 104 aaKnown RBP3.46□□□□□ -1.86
RTN4-215ENST00000491592 PRR4Q16378 134 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 MEIG1Q5JSS6 88 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 C10orf113Q5VZT2 155 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 Q6AWC8 147 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 FOXI2Q6ZQN5 318 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 PDPNQ86YL7 162 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 UBALD1Q8TB05 177 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 CARD19Q96LW7 228 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 OPRPNQ99935 248 aaPredicted RBP3.46□□□□□ -1.86
RTN4-215ENST00000491592 SPCS1Q9Y6A9 102 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 SDK2Q58EX2 2172 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 FREM1Q5H8C1 2179 aa3.46□□□□□ -1.86
RTN4-215ENST00000491592 TANC2Q9HCD6 1990 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 TRBV7-6A0A0J9YX20 115 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 LOC107984640A0A0U1RRK4 108 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 A0A1B0GUT8 65 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 C19orf71A6NCJ1 209 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 A8MUN3 132 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 LST1O00453 97 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 COX7A2LO14548 114 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 FSTL3O95633 263 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 LTAP01374 205 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 SLC25A5P05141 298 aaKnown RBP3.45□□□□□ -1.86
RTN4-215ENST00000491592 RNASE2P10153 161 aaKnown RBP3.45□□□□□ -1.86
RTN4-215ENST00000491592 HLA-DRB4P13762 266 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 PSMB8P28062 276 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 ZC2HC1BQ5TFG8 222 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 HES3Q5TGS1 186 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 UNQ9165/PRO28630Q6UXU0 137 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 Q6ZRP5 223 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 Q6ZS92 163 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 OR4A5Q8NH83 315 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 TIMM17AQ99595 171 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 VGLL1Q99990 258 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 CTSZQ9UBR2 303 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 MOB4Q9Y3A3 225 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 F11RQ9Y624 299 aaKnown RBP3.45□□□□□ -1.86
RTN4-215ENST00000491592 HLA-DRB4X5D2U9 266 aa3.45□□□□□ -1.86
RTN4-215ENST00000491592 DYSFO75923 2080 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 IGLV4-3A0A075B6K6 122 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 IGHV3OR16-10A0A075B7F0 116 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 IGHV3-43A0A0B4J1X8 118 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 TRAV3A0A0B4J244 114 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 TCRBV4S1A1TA0A5B7 111 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 DEFB108AA8MXU0 73 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 LY6LH3BQJ8 138 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 KLF7O75840 302 aaPredicted RBP3.44□□□□□ -1.86
RTN4-215ENST00000491592 IGHV3-7P01780 117 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 CHTF8P0CG12 524 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 MPV17P39210 176 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 REG3AQ06141 175 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 RRN3P1Q2M238 152 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 C14orf177Q52M58 125 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 C2orf66Q6UXQ4 117 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 Q6ZS52 159 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 DEFB119Q8N690 84 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 GTSF1Q8WW33 167 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 Q9H3A6 140 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 OTORQ9NRC9 128 aa3.44□□□□□ -1.86
RTN4-215ENST00000491592 ZNF706Q9Y5V0 76 aaPredicted RBP3.44□□□□□ -1.86
RTN4-215ENST00000491592 IGKV1OR2-108A0A075B7D4 117 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 IGHV3-16A0A0C4DH30 117 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 SPAARA0A1B0GVQ0 90 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 A0A1B0GW54 56 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 RPL37AP8A6NKH3 93 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 IGLL5B9A064 214 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 NDUFC2-KCTD14E9PQ53 114 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 DUSP14O95147 198 aaKnown RBP3.43□□□□□ -1.86
RTN4-215ENST00000491592 GAS8-AS1O95177 125 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 HBDP02042 147 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 CGB3P0DN86 165 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 CGB7P0DN87 165 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 LGALS3P17931 250 aaKnown RBP3.43□□□□□ -1.86
RTN4-215ENST00000491592 LINC00313P59037 77 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 HES1Q14469 280 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 RPL39P5Q59GN2 51 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 C9orf66Q5T8R8 295 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 GUSBP11Q6P575 273 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 Q6ZR03 302 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 LINC00305Q7Z4B0 112 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 C10orf126Q8N4M7 172 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 ATP6V0E2Q8NHE4 81 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 KLF14Q8TD94 323 aaPredicted RBP3.43□□□□□ -1.86
RTN4-215ENST00000491592 ITLN1Q8WWA0 313 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 IFI27L1Q96BM0 104 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 RMI2Q96E14 147 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 ZNF414Q96IQ9 312 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 LINC00479Q96M42 142 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 TRGV9Q99603 122 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 LINC00574Q9H8X3 128 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 U3KQK5 164 aa3.43□□□□□ -1.86
RTN4-215ENST00000491592 PCNTO95613 3336 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms