RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 DPPA3Q6W0C5 159 aa11.95□□□□□ -0.5
SEC13-218ENST00000490283 ZNF575Q86XF7 245 aa11.95□□□□□ -0.5
SEC13-218ENST00000490283 OR11H4Q8NGC9 324 aa11.95□□□□□ -0.5
SEC13-218ENST00000490283 PGPEP1LA6NFU8 196 aa11.94□□□□□ -0.5
SEC13-218ENST00000490283 K7EP13 123 aa11.94□□□□□ -0.5
SEC13-218ENST00000490283 RNASE3P12724 160 aaKnown RBP11.94□□□□□ -0.5
SEC13-218ENST00000490283 TPT1P13693 172 aaKnown RBP11.94□□□□□ -0.5
SEC13-218ENST00000490283 EVI2AP22794 236 aa11.94□□□□□ -0.5
SEC13-218ENST00000490283 FAM162BQ5T6X4 162 aa11.94□□□□□ -0.5
SEC13-218ENST00000490283 IGHV3-73A0A0B4J1V6 119 aa11.93□□□□□ -0.5
SEC13-218ENST00000490283 IGKV3D-20A0A0C4DH25 116 aa11.93□□□□□ -0.5
SEC13-218ENST00000490283 LOC100131303A0A0U1RQF7 123 aa11.93□□□□□ -0.5
SEC13-218ENST00000490283 TRBV6-4A0A1B0GX49 114 aa11.93□□□□□ -0.5
SEC13-218ENST00000490283 PAGE4O60829 102 aa11.93□□□□□ -0.5
SEC13-218ENST00000490283 MGST1P10620 155 aaKnown RBP11.93□□□□□ -0.5
SEC13-218ENST00000490283 LGALSLQ3ZCW2 172 aaPredicted RBP11.93□□□□□ -0.5
SEC13-218ENST00000490283 NFE4Q86UQ8 179 aa11.93□□□□□ -0.5
SEC13-218ENST00000490283 SYT8Q8NBV8 401 aa11.93□□□□□ -0.5
SEC13-218ENST00000490283 MBD3L1Q8WWY6 194 aa11.93□□□□□ -0.5
SEC13-218ENST00000490283 TRBV6-1A0A0K0K1D8 114 aa11.92□□□□□ -0.5
SEC13-218ENST00000490283 A0A1B0GV50 99 aa11.92□□□□□ -0.5
SEC13-218ENST00000490283 A8MWV9 139 aa11.92□□□□□ -0.5
SEC13-218ENST00000490283 H2AFB1P0C5Y9 115 aa11.92□□□□□ -0.5
SEC13-218ENST00000490283 PIK3CD-AS1Q5SR53 167 aa11.92□□□□□ -0.5
SEC13-218ENST00000490283 SLC25A29Q8N8R3 303 aa11.92□□□□□ -0.5
SEC13-218ENST00000490283 ZC2HC1AQ96GY0 325 aa11.92□□□□□ -0.5
SEC13-218ENST00000490283 IL36BQ9NZH7 164 aa11.92□□□□□ -0.5
SEC13-218ENST00000490283 PKHD1P08F94 4074 aa11.91□□□□□ -0.5
SEC13-218ENST00000490283 M0R036 132 aa11.91□□□□□ -0.5
SEC13-218ENST00000490283 SH2D1AO60880 128 aa11.91□□□□□ -0.5
SEC13-218ENST00000490283 S100A9P06702 114 aaKnown RBP11.91□□□□□ -0.5
SEC13-218ENST00000490283 TIRAPP58753 221 aa11.91□□□□□ -0.5
SEC13-218ENST00000490283 TMUB2Q71RG4 321 aa11.91□□□□□ -0.5
SEC13-218ENST00000490283 COX8CQ7Z4L0 72 aa11.91□□□□□ -0.5
SEC13-218ENST00000490283 WFDC10BQ8IUB3 73 aa11.91□□□□□ -0.5
SEC13-218ENST00000490283 H3BVH4 76 aa11.9□□□□□ -0.5
SEC13-218ENST00000490283 EREGO14944 169 aa11.9□□□□□ -0.5
SEC13-218ENST00000490283 LTAP01374 205 aa11.9□□□□□ -0.5
SEC13-218ENST00000490283 EIF5AL1Q6IS14 154 aaKnown RBP11.9□□□□□ -0.5
SEC13-218ENST00000490283 SPATA12Q7Z6I5 190 aa11.9□□□□□ -0.5
SEC13-218ENST00000490283 C10orf126Q8N4M7 172 aa11.9□□□□□ -0.5
SEC13-218ENST00000490283 TRAV8-6A0A0B4J262 113 aa11.89□□□□□ -0.51
SEC13-218ENST00000490283 KRBOX1C9JBD0 128 aa11.89□□□□□ -0.51
SEC13-218ENST00000490283 DNAH10OSP0CZ25 163 aa11.89□□□□□ -0.51
SEC13-218ENST00000490283 ZFP2Q6ZN57 461 aa11.89□□□□□ -0.51
SEC13-218ENST00000490283 PARLQ9H300 379 aa11.89□□□□□ -0.51
SEC13-218ENST00000490283 TEX46H3BTG2 121 aa11.88□□□□□ -0.51
SEC13-218ENST00000490283 CRIP1P50238 77 aa11.88□□□□□ -0.51
SEC13-218ENST00000490283 ERVFC1-1P60608 527 aa11.88□□□□□ -0.51
SEC13-218ENST00000490283 ZNF674Q2M3X9 581 aa11.88□□□□□ -0.51
SEC13-218ENST00000490283 DNLZQ5SXM8 178 aa11.88□□□□□ -0.51
SEC13-218ENST00000490283 PHLDA3Q9Y5J5 127 aa11.88□□□□□ -0.51
SEC13-218ENST00000490283 PKD1P98161 4303 aa11.87□□□□□ -0.51
SEC13-218ENST00000490283 IGHV3-38A0A0C4DH36 116 aa11.87□□□□□ -0.51
SEC13-218ENST00000490283 GRIFINA4D1Z8 144 aa11.87□□□□□ -0.51
SEC13-218ENST00000490283 RHODO00212 210 aa11.87□□□□□ -0.51
SEC13-218ENST00000490283 CRYGDP07320 174 aa11.87□□□□□ -0.51
SEC13-218ENST00000490283 ARMS2P0C7Q2 107 aa11.87□□□□□ -0.51
SEC13-218ENST00000490283 RAB5CP51148 216 aa11.87□□□□□ -0.51
SEC13-218ENST00000490283 LINC01559Q495D7 138 aa11.87□□□□□ -0.51
SEC13-218ENST00000490283 OR10J3Q5JRS4 329 aa11.87□□□□□ -0.51
SEC13-218ENST00000490283 ATP6V0E2Q8NHE4 81 aa11.87□□□□□ -0.51
SEC13-218ENST00000490283 MSRB1Q9NZV6 116 aa11.87□□□□□ -0.51
SEC13-218ENST00000490283 HERC2O95714 4834 aa11.86□□□□□ -0.51
SEC13-218ENST00000490283 TMSB15BA0A087X1C1 80 aa11.86□□□□□ -0.51
SEC13-218ENST00000490283 SCO2A0A1W2PP80 73 aa11.86□□□□□ -0.51
SEC13-218ENST00000490283 MANBALQ9NQG1 85 aa11.86□□□□□ -0.51
SEC13-218ENST00000490283 DNAH11Q96DT5 4516 aa11.86□□□□□ -0.51
SEC13-218ENST00000490283 LELP1Q5T871 98 aa11.85□□□□□ -0.51
SEC13-218ENST00000490283 DMRTA1Q5VZB9 504 aa11.85□□□□□ -0.51
SEC13-218ENST00000490283 Q6ZRN7 208 aaPredicted RBP11.85□□□□□ -0.51
SEC13-218ENST00000490283 BAGE2Q86Y30 109 aa11.85□□□□□ -0.51
SEC13-218ENST00000490283 ZFP82Q8N141 532 aa11.85□□□□□ -0.51
SEC13-218ENST00000490283 GTSF1LQ9H1H1 148 aa11.85□□□□□ -0.51
SEC13-218ENST00000490283 M0R381 172 aa11.84□□□□□ -0.51
SEC13-218ENST00000490283 FAM74A4Q5TZK3 123 aa11.84□□□□□ -0.51
SEC13-218ENST00000490283 TCTE3Q8IZS6 198 aa11.84□□□□□ -0.51
SEC13-218ENST00000490283 GNG13Q9P2W3 67 aa11.84□□□□□ -0.51
SEC13-218ENST00000490283 KIAA1109Q2LD37 5005 aa11.84□□□□□ -0.51
SEC13-218ENST00000490283 GAGE12JA6NER3 117 aa11.83□□□□□ -0.52
SEC13-218ENST00000490283 GAGE1Q13065 139 aa11.83□□□□□ -0.52
SEC13-218ENST00000490283 GAGE4Q13068 117 aa11.83□□□□□ -0.52
SEC13-218ENST00000490283 GAGE5Q13069 117 aa11.83□□□□□ -0.52
SEC13-218ENST00000490283 GAGE13Q4V321 117 aa11.83□□□□□ -0.52
SEC13-218ENST00000490283 LINC01556Q5JQF7 62 aa11.83□□□□□ -0.52
SEC13-218ENST00000490283 JPT2Q9H910 190 aa11.83□□□□□ -0.52
SEC13-218ENST00000490283 TNFRSF18Q9Y5U5 241 aa11.83□□□□□ -0.52
SEC13-218ENST00000490283 CDK2AP2O75956 126 aa11.82□□□□□ -0.52
SEC13-218ENST00000490283 TRAV1-1A0A0B4J248 108 aa11.81□□□□□ -0.52
SEC13-218ENST00000490283 PSCAO43653 123 aa11.81□□□□□ -0.52
SEC13-218ENST00000490283 IFNA1P01562 189 aa11.81□□□□□ -0.52
SEC13-218ENST00000490283 KRTAP10-2P60368 255 aa11.81□□□□□ -0.52
SEC13-218ENST00000490283 PRR27Q6MZM9 219 aa11.81□□□□□ -0.52
SEC13-218ENST00000490283 Q6ZSN1 163 aa11.81□□□□□ -0.52
SEC13-218ENST00000490283 SFRP2Q96HF1 295 aa11.81□□□□□ -0.52
SEC13-218ENST00000490283 SAMD10Q9BYL1 202 aa11.81□□□□□ -0.52
SEC13-218ENST00000490283 SCRT2Q9NQ03 307 aa11.81□□□□□ -0.52
SEC13-218ENST00000490283 PGPEP1Q9NXJ5 209 aa11.81□□□□□ -0.52
SEC13-218ENST00000490283 DYNC1H1Q14204 4646 aaKnown RBP11.81□□□□□ -0.52
SEC13-218ENST00000490283 A0A087WWL8 130 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms