RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 IGHV3-73A0A0B4J1V6 119 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 TRAV3A0A0B4J244 114 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 A6NDX4 124 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 IGLV1-51P01701 117 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 COX8AP10176 69 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 CD24P25063 80 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 EFNA4P52798 201 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 IL17AQ16552 155 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 ESRGQ1W209 222 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 PYDC2Q56P42 97 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 S100A7L2Q5SY68 101 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 SDIM1Q6ZPB5 146 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 Q8N814 137 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 C15orf56Q8N910 161 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 Q8N9W7 124 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 CYSTM1Q9H1C7 97 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 HELZP42694 1942 aaKnown RBP3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 NUP98P52948 1817 aa3.18□□□□□ -1.9
CTNNB1-215ENST00000488914 MAST2Q6P0Q8 1798 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 UNC13BO14795 1591 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 RALGAPBQ86X10 1494 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 FXYD6-FXYD2A0A087WZ82 144 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 IGHV3-15A0A0B4J1V0 119 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 LOC107984156A0A0G2JMH3 177 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 INSP01308 110 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 TRGV3P03979 118 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 RPL28P46779 137 aaKnown RBP3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 XCL1P47992 114 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 LYZP61626 148 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 ZNF117Q03924 483 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 LYPD5Q6UWN5 251 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 ARL17AQ8IVW1 177 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 Q8IYB0 196 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 CYP4F30PQ9H0H9 118 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 FXYD6Q9H0Q3 95 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 KIF25-AS1Q9Y6Z4 181 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 COL16A1Q07092 1604 aaPredicted RBP3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 AHDC1Q5TGY3 1603 aaPredicted RBP3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 HMGXB3Q12766 1538 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 ITSN2Q9NZM3 1697 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 UGGT1Q9NYU2 1555 aa3.17□□□□□ -1.9
CTNNB1-215ENST00000488914 KIDINS220Q9ULH0 1771 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 IGKV2D-26A0A0A0MRZ7 120 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 TMEM223A0PJW6 202 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 A6NIN4 97 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 H3BMM0 161 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 H7BZZ5 65 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 TLX1NBP0CAT3 122 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 C3orf79P0CE67 100 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 FXYD2P54710 66 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 SYCNQ0VAF6 134 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 KLKP1Q107X0 134 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 DEFB121Q5J5C9 76 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 NTM-AS1Q6ZSK4 140 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 C2orf91Q6ZV80 131 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 FAM19A2Q8N3H0 131 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 CIRBP-AS1Q8TBR5 109 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 UBE2WQ96B02 151 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 CYYR1Q96J86 154 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 MANBALQ9NQG1 85 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 PLXNB3Q9ULL4 1909 aa3.16□□□□□ -1.9
CTNNB1-215ENST00000488914 TICRRQ7Z2Z1 1910 aa3.15□□□□□ -1.9
CTNNB1-215ENST00000488914 MYO18AQ92614 2054 aaKnown RBP3.15□□□□□ -1.9
CTNNB1-215ENST00000488914 ASXL1Q8IXJ9 1541 aa3.15□□□□□ -1.9
CTNNB1-215ENST00000488914 GPATCH8Q9UKJ3 1502 aaKnown RBP3.15□□□□□ -1.9
CTNNB1-215ENST00000488914 ROMO1P60602 79 aa3.15□□□□□ -1.91
CTNNB1-215ENST00000488914 ZNF56Q15929 161 aa3.15□□□□□ -1.91
CTNNB1-215ENST00000488914 MUC7Q8TAX7 377 aa3.15□□□□□ -1.91
CTNNB1-215ENST00000488914 LINC00574Q9H8X3 128 aa3.15□□□□□ -1.91
CTNNB1-215ENST00000488914 TRAPPC1Q9Y5R8 145 aa3.15□□□□□ -1.91
CTNNB1-215ENST00000488914 U3KQK5 164 aa3.15□□□□□ -1.91
CTNNB1-215ENST00000488914 SCN4AP35499 1836 aa3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 ATAD5Q96QE3 1844 aa3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 C16orf90A8MZG2 172 aa3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 C11orf94C9JXX5 98 aa3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 DSCR4P56555 118 aaPredicted RBP3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 C9orf116Q5BN46 136 aaPredicted RBP3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 C1orf134Q5TEV5 83 aa3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 LYZL2Q7Z4W2 148 aa3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 C14orf178Q8N769 122 aaPredicted RBP3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 TIMM21Q9BVV7 248 aa3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 DYNLRB1Q9NP97 96 aa3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 RGPD3A6NKT7 1758 aaPredicted RBP3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 CFAP43Q8NDM7 1665 aa3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 ABCC6O95255 1503 aa3.14□□□□□ -1.91
CTNNB1-215ENST00000488914 SHROOM2Q13796 1616 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 TRAV7A0A075B6U4 112 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 TRBV10-2A0A0K0K1G8 114 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 B4DSR2 109 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 FXYD1O00168 92 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 IGHV4-34P06331 123 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 KRTAP10-1P60331 282 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 ZNF791Q3KP31 576 aaPredicted RBP3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 ZNF826PQ6ZT77 177 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 C6orf201Q7Z4U5 140 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 VMO1Q7Z5L0 202 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 MIR7-3HGQ8N6C7 128 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 CYB561D1Q8N8Q1 229 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 C1orf64Q8NEQ6 169 aa3.13□□□□□ -1.91
CTNNB1-215ENST00000488914 LINC00167Q96N53 147 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms