RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 VPS13CQ709C8 3753 aa10.86□□□□□ -0.67
RER1-207ENST00000488353 ODF3BA8MYP8 253 aa10.86□□□□□ -0.67
RER1-207ENST00000488353 B5MCH6 92 aa10.86□□□□□ -0.67
RER1-207ENST00000488353 PRTN3P24158 256 aa10.86□□□□□ -0.67
RER1-207ENST00000488353 CITED1Q99966 193 aa10.86□□□□□ -0.67
RER1-207ENST00000488353 IGHV4-4A0A075B6R2 117 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 IGHV7-4-1A0A0J9YVY3 117 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 H3BVH4 76 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 COX6B1P14854 86 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 SRD5A1P18405 259 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 ZFP36P26651 326 aaKnown RBP10.85□□□□□ -0.67
RER1-207ENST00000488353 SPANXN1Q5VSR9 72 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 CFAP161Q6P656 301 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 VMO1Q7Z5L0 202 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 PLEKHB2Q96CS7 222 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 IGSF10Q6WRI0 2623 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 SCGB2A1O75556 95 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 CTSGP08311 255 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 ANKRD29Q8N6D5 301 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 SLC50A1Q9BRV3 221 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 C11orf21Q9P2W6 132 aa10.85□□□□□ -0.67
RER1-207ENST00000488353 PRAC2D3DTV9 90 aa10.84□□□□□ -0.67
RER1-207ENST00000488353 ZFHX3Q15911 3703 aa10.84□□□□□ -0.67
RER1-207ENST00000488353 ZFYVE26Q68DK2 2539 aa10.84□□□□□ -0.67
RER1-207ENST00000488353 M0R1W7 72 aa10.84□□□□□ -0.67
RER1-207ENST00000488353 BAALCQ8WXS3 180 aa10.84□□□□□ -0.67
RER1-207ENST00000488353 KIR2DL4Q99706 377 aa10.84□□□□□ -0.67
RER1-207ENST00000488353 IGHV3-66A0A0C4DH42 116 aa10.83□□□□□ -0.68
RER1-207ENST00000488353 RHODO00212 210 aa10.83□□□□□ -0.68
RER1-207ENST00000488353 NHLRC4P0CG21 123 aaPredicted RBP10.83□□□□□ -0.68
RER1-207ENST00000488353 ASIPP42127 132 aa10.83□□□□□ -0.68
RER1-207ENST00000488353 SCGB1C2P0DMR2 95 aa10.83□□□□□ -0.68
RER1-207ENST00000488353 SUMO2P61956 95 aaKnown RBP10.83□□□□□ -0.68
RER1-207ENST00000488353 C10orf126Q8N4M7 172 aa10.83□□□□□ -0.68
RER1-207ENST00000488353 RASL10AQ92737 203 aa10.83□□□□□ -0.68
RER1-207ENST00000488353 IGHV3OR16-13A0A075B7E8 117 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 IGHV3-74A0A0B4J1X5 117 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 GAGE2BQ13066 116 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 GAGE2EQ4V326 116 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 KLHL30-AS1Q8NEE0 82 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 GAGE2DQ9UEU5 116 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 FLNCQ14315 2725 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 IGHV7-81A0A0B4J1V7 117 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 A0A0J9YY99 117 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 ECSCRQ19T08 205 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 C2orf66Q6UXQ4 117 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 RNF182Q8N6D2 247 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 CELSR1Q9NYQ6 3014 aa10.82□□□□□ -0.68
RER1-207ENST00000488353 M0QXV9 152 aa10.81□□□□□ -0.68
RER1-207ENST00000488353 CFC1BP0CG36 223 aa10.81□□□□□ -0.68
RER1-207ENST00000488353 CFC1P0CG37 223 aa10.81□□□□□ -0.68
RER1-207ENST00000488353 AGPAT4-IT1Q9H0P7 198 aa10.81□□□□□ -0.68
RER1-207ENST00000488353 MAP1AP78559 2803 aaPredicted RBP10.81□□□□□ -0.68
RER1-207ENST00000488353 SNCGO76070 127 aa10.81□□□□□ -0.68
RER1-207ENST00000488353 Q8N6K4 173 aa10.81□□□□□ -0.68
RER1-207ENST00000488353 AJUBAQ96IF1 538 aa10.81□□□□□ -0.68
RER1-207ENST00000488353 GAGE12JA6NER3 117 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 SLC25A20O43772 301 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 GAGE7O76087 117 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 GAGE12FP0CL80 117 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 GAGE12GP0CL81 117 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 GAGE12IP0CL82 117 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 NDUFV3P56181 108 aaKnown RBP10.8□□□□□ -0.68
RER1-207ENST00000488353 GAGE4Q13068 117 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 BPESC1Q9GZL8 116 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 PRO1854Q9UHT4 67 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 SPG11Q96JI7 2443 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 IGHV3-49A0A0A0MS15 119 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 CLEC3BP05452 202 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 HERVK_113P61574 105 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 C15orf32Q32M92 178 aa10.8□□□□□ -0.68
RER1-207ENST00000488353 TRAV8-2A0A0B4J237 113 aa10.79□□□□□ -0.68
RER1-207ENST00000488353 IGHV3-30P01768 117 aa10.79□□□□□ -0.68
RER1-207ENST00000488353 IGHV3-30-5P0DP03 117 aa10.79□□□□□ -0.68
RER1-207ENST00000488353 TTC32Q5I0X7 151 aa10.79□□□□□ -0.68
RER1-207ENST00000488353 PAPPA-AS1Q5QFB9 102 aa10.79□□□□□ -0.68
RER1-207ENST00000488353 Q8N9W7 124 aa10.79□□□□□ -0.68
RER1-207ENST00000488353 USP24Q9UPU5 2620 aa10.79□□□□□ -0.68
RER1-207ENST00000488353 TGFAP01135 160 aa10.79□□□□□ -0.68
RER1-207ENST00000488353 TRBV7-9A0A0J9YWB2 115 aa10.78□□□□□ -0.68
RER1-207ENST00000488353 SLC25A29Q8N8R3 303 aa10.78□□□□□ -0.68
RER1-207ENST00000488353 USP9XQ93008 2570 aaPredicted RBP10.78□□□□□ -0.68
RER1-207ENST00000488353 BUB3O43684 328 aa10.78□□□□□ -0.68
RER1-207ENST00000488353 IFITM1P13164 125 aa10.78□□□□□ -0.68
RER1-207ENST00000488353 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.78□□□□□ -0.68
RER1-207ENST00000488353 CENPVL3A0A0U1RRI6 287 aa10.77□□□□□ -0.69
RER1-207ENST00000488353 C9JAW5 83 aa10.77□□□□□ -0.69
RER1-207ENST00000488353 Q6Q795 121 aa10.77□□□□□ -0.69
RER1-207ENST00000488353 CLEC19AQ6UXS0 136 aa10.77□□□□□ -0.69
RER1-207ENST00000488353 HIF1ANQ9NWT6 349 aa10.77□□□□□ -0.69
RER1-207ENST00000488353 UTP20O75691 2785 aaKnown RBP10.77□□□□□ -0.69
RER1-207ENST00000488353 G3V318 75 aa10.77□□□□□ -0.69
RER1-207ENST00000488353 ATP6V0E1O15342 81 aa10.77□□□□□ -0.69
RER1-207ENST00000488353 EBI3Q14213 229 aa10.77□□□□□ -0.69
RER1-207ENST00000488353 FAM110AQ9BQ89 295 aa10.77□□□□□ -0.69
RER1-207ENST00000488353 SIRPDQ9H106 197 aa10.77□□□□□ -0.69
RER1-207ENST00000488353 CRYBG3Q68DQ2 2970 aa10.76□□□□□ -0.69
RER1-207ENST00000488353 TRAV4A0A0B4J268 109 aa10.76□□□□□ -0.69
RER1-207ENST00000488353 C11orf86A6NJI1 115 aa10.76□□□□□ -0.69
RER1-207ENST00000488353 CRYGDP07320 174 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms