RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 C8orf49Q96NF6 230 aa4.42□□□□□ -1.7
CTDSPL-208ENST00000486978 HHLA3Q9XRX5 114 aa4.42□□□□□ -1.7
CTDSPL-208ENST00000486978 A0A1W2PPQ1 181 aa4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 MAP1LC3B2A6NCE7 125 aa4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 FAM74A7A6NL05 159 aa4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 HMSDA8MTL9 139 aa4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 GCGP01275 180 aa4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 IFNA7P01567 189 aa4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 PFN1P07737 140 aaKnown RBP4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 PPT1P50897 306 aa4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 ZNF80P51504 273 aaPredicted RBP4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 FGF8P55075 233 aaPredicted RBP4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 UBE2G2P60604 165 aa4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 MRPL23Q16540 153 aaKnown RBP4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 SAPCD1Q5SSQ6 148 aa4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 NKX6-2Q9C056 277 aaPredicted RBP4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 MAP1LC3BQ9GZQ8 125 aa4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 C11orf21Q9P2W6 132 aa4.41□□□□□ -1.7
CTDSPL-208ENST00000486978 TRAV34A0A0B4J273 112 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 A0A0D9SG52 128 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 PEX7O00628 323 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 ORM1P02763 201 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 SEC11BP0C7V7 166 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 HAMPP81172 84 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 SERTAD4-AS1Q5TG53 156 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 NEGR1Q7Z3B1 354 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 Q86TA4 180 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 OR4C5Q8NGB2 326 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 OR11H4Q8NGC9 324 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 STOML3Q8TAV4 291 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 PCNPQ8WW12 178 aaKnown RBP4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 HIST1H2BAQ96A08 127 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 LINC00479Q96M42 142 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 C9orf85Q96MD7 179 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 KRTAP1-5Q9BYS1 174 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 PLA2G2DQ9UNK4 145 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 ARL2-SNX15V9GYD0 113 aa4.4□□□□□ -1.71
CTDSPL-208ENST00000486978 KANTRA0A1W2PQU2 76 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 FABP5P3A8MUU1 101 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 KRTAP29-1A8MX34 341 aaPredicted RBP4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 UMAD1C9J7I0 102 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 C9JCJ5 164 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 K7EQD1 137 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 SIVA1O15304 175 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 BCL2L11O43521 198 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 CIDEAO60543 219 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 NXPH4O95158 308 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 RNASE3P12724 160 aaKnown RBP4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 GYPEP15421 78 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 GATA1P15976 413 aaPredicted RBP4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 BTF3P20290 206 aaKnown RBP4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 SRIP30626 198 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 FHITP49789 147 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 EIF5AP63241 154 aaKnown RBP4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 ZNF876PQ49A33 203 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 LYPD5Q6UWN5 251 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 FAM213BQ8TBF2 198 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 PTH2Q96A98 100 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 FMC1Q96HJ9 113 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 TXNDC17Q9BRA2 123 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 TCEAL7Q9BRU2 100 aa4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 ZNF471Q9BX82 626 aaPredicted RBP4.39□□□□□ -1.71
CTDSPL-208ENST00000486978 PGPEP1LA6NFU8 196 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 RS1O15537 224 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 S100A4P26447 101 aaKnown RBP4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 ASIPP42127 132 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 UBE2G1P62253 170 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 ZNF506Q5JVG8 444 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 CFAP126Q5VTH2 177 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 CST9LP1Q5W188 147 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 DPPA3Q6W0C5 159 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 TMUB2Q71RG4 321 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 COX8CQ7Z4L0 72 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 SH2D6Q7Z4S9 175 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 SFT2D1Q8WV19 159 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 MBD3L1Q8WWY6 194 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 FRZBQ92765 325 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 ZFP30Q9Y2G7 519 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 FAT4Q6V0I7 4981 aa4.38□□□□□ -1.71
CTDSPL-208ENST00000486978 IGKV3D-20A0A0C4DH25 116 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 TRBV6-1A0A0K0K1D8 114 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 LOC100131303A0A0U1RQF7 123 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 B4DEV8 164 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 PAGE4O60829 102 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 PFDN1O60925 122 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 LTAP01374 205 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 TPT1P13693 172 aaKnown RBP4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 AKR1C3P42330 323 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 LINC00315P59091 139 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 KRTAP10-1P60331 282 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 PIK3CD-AS1Q5SR53 167 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 FAM162BQ5T6X4 162 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 NHLRC2Q8NBF2 726 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 ZC2HC1AQ96GY0 325 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 PRADC1Q9BSG0 188 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 LY96Q9Y6Y9 160 aa4.37□□□□□ -1.71
CTDSPL-208ENST00000486978 TRAV9-2A0A087WT02 112 aa4.36□□□□□ -1.71
CTDSPL-208ENST00000486978 IGHV3-73A0A0B4J1V6 119 aa4.36□□□□□ -1.71
CTDSPL-208ENST00000486978 A0A1B0GV50 99 aa4.36□□□□□ -1.71
CTDSPL-208ENST00000486978 TRBV6-4A0A1B0GX49 114 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms