RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 LCE1DQ5T752 114 aa9.83□□□□□ -0.84
CLDN11-207ENST00000486975 Q6ZRN7 208 aaPredicted RBP9.83□□□□□ -0.84
CLDN11-207ENST00000486975 PRNTQ86SH4 94 aa9.83□□□□□ -0.84
CLDN11-207ENST00000486975 C9orf85Q96MD7 179 aa9.83□□□□□ -0.84
CLDN11-207ENST00000486975 CYTL1Q9NRR1 136 aa9.83□□□□□ -0.84
CLDN11-207ENST00000486975 TIRAPP58753 221 aa9.82□□□□□ -0.84
CLDN11-207ENST00000486975 HIST1H2BAQ96A08 127 aa9.82□□□□□ -0.84
CLDN11-207ENST00000486975 TRAV9-2A0A087WT02 112 aa9.81□□□□□ -0.84
CLDN11-207ENST00000486975 FAM74A7A6NL05 159 aa9.81□□□□□ -0.84
CLDN11-207ENST00000486975 RS1O15537 224 aa9.81□□□□□ -0.84
CLDN11-207ENST00000486975 IFNA7P01567 189 aa9.81□□□□□ -0.84
CLDN11-207ENST00000486975 DNAH10OSP0CZ25 163 aa9.81□□□□□ -0.84
CLDN11-207ENST00000486975 ZNF345Q14585 488 aa9.81□□□□□ -0.84
CLDN11-207ENST00000486975 PIK3CD-AS1Q5SR53 167 aa9.81□□□□□ -0.84
CLDN11-207ENST00000486975 SPATA12Q7Z6I5 190 aa9.81□□□□□ -0.84
CLDN11-207ENST00000486975 NFE4Q86UQ8 179 aa9.81□□□□□ -0.84
CLDN11-207ENST00000486975 LY96Q9Y6Y9 160 aa9.81□□□□□ -0.84
CLDN11-207ENST00000486975 ARL2-SNX15V9GYD0 113 aa9.81□□□□□ -0.84
CLDN11-207ENST00000486975 RYR1P21817 5038 aa9.8□□□□□ -0.84
CLDN11-207ENST00000486975 TRBV6-4A0A1B0GX49 114 aa9.8□□□□□ -0.84
CLDN11-207ENST00000486975 MAP1LC3B2A6NCE7 125 aa9.8□□□□□ -0.84
CLDN11-207ENST00000486975 PEX7O00628 323 aa9.8□□□□□ -0.84
CLDN11-207ENST00000486975 RNASE3P12724 160 aaKnown RBP9.8□□□□□ -0.84
CLDN11-207ENST00000486975 CFAP126Q5VTH2 177 aa9.8□□□□□ -0.84
CLDN11-207ENST00000486975 COX8CQ7Z4L0 72 aa9.8□□□□□ -0.84
CLDN11-207ENST00000486975 Q86TA4 180 aa9.8□□□□□ -0.84
CLDN11-207ENST00000486975 LINC00479Q96M42 142 aa9.8□□□□□ -0.84
CLDN11-207ENST00000486975 TCEAL7Q9BRU2 100 aa9.8□□□□□ -0.84
CLDN11-207ENST00000486975 MAP1LC3BQ9GZQ8 125 aa9.8□□□□□ -0.84
CLDN11-207ENST00000486975 PCLOQ9Y6V0 5065 aa9.8□□□□□ -0.84
CLDN11-207ENST00000486975 TRAV34A0A0B4J273 112 aa9.79□□□□□ -0.84
CLDN11-207ENST00000486975 FABP5P3A8MUU1 101 aa9.79□□□□□ -0.84
CLDN11-207ENST00000486975 FHITP49789 147 aa9.79□□□□□ -0.84
CLDN11-207ENST00000486975 FGF8P55075 233 aaPredicted RBP9.79□□□□□ -0.84
CLDN11-207ENST00000486975 UBE2G2P60604 165 aa9.79□□□□□ -0.84
CLDN11-207ENST00000486975 RHOHQ15669 191 aa9.79□□□□□ -0.84
CLDN11-207ENST00000486975 DPPA3Q6W0C5 159 aa9.79□□□□□ -0.84
CLDN11-207ENST00000486975 WFDC10BQ8IUB3 73 aa9.79□□□□□ -0.84
CLDN11-207ENST00000486975 KCNRGQ8N5I3 272 aa9.79□□□□□ -0.84
CLDN11-207ENST00000486975 LRP1BQ9NZR2 4599 aa9.78□□□□□ -0.84
CLDN11-207ENST00000486975 IGKV3D-20A0A0C4DH25 116 aa9.78□□□□□ -0.84
CLDN11-207ENST00000486975 LOC100131303A0A0U1RQF7 123 aa9.78□□□□□ -0.84
CLDN11-207ENST00000486975 PGPEP1LA6NFU8 196 aa9.78□□□□□ -0.84
CLDN11-207ENST00000486975 EVI2AP22794 236 aa9.78□□□□□ -0.84
CLDN11-207ENST00000486975 ZNF506Q5JVG8 444 aa9.78□□□□□ -0.84
CLDN11-207ENST00000486975 SLC25A29Q8N8R3 303 aa9.78□□□□□ -0.84
CLDN11-207ENST00000486975 STOML3Q8TAV4 291 aa9.78□□□□□ -0.84
CLDN11-207ENST00000486975 PRADC1Q9BSG0 188 aa9.78□□□□□ -0.84
CLDN11-207ENST00000486975 ZFP30Q9Y2G7 519 aa9.78□□□□□ -0.84
CLDN11-207ENST00000486975 TRBV6-1A0A0K0K1D8 114 aa9.77□□□□□ -0.85
CLDN11-207ENST00000486975 HMSDA8MTL9 139 aa9.77□□□□□ -0.85
CLDN11-207ENST00000486975 SEC11BP0C7V7 166 aa9.77□□□□□ -0.85
CLDN11-207ENST00000486975 MGST1P10620 155 aaKnown RBP9.77□□□□□ -0.85
CLDN11-207ENST00000486975 KRTAP10-2P60368 255 aa9.77□□□□□ -0.85
CLDN11-207ENST00000486975 DNLZQ5SXM8 178 aa9.77□□□□□ -0.85
CLDN11-207ENST00000486975 ZFP2Q6ZN57 461 aa9.77□□□□□ -0.85
CLDN11-207ENST00000486975 C10orf126Q8N4M7 172 aa9.77□□□□□ -0.85
CLDN11-207ENST00000486975 NHLRC2Q8NBF2 726 aa9.77□□□□□ -0.85
CLDN11-207ENST00000486975 FMC1Q96HJ9 113 aa9.77□□□□□ -0.85
CLDN11-207ENST00000486975 IL36BQ9NZH7 164 aa9.77□□□□□ -0.85
CLDN11-207ENST00000486975 A8MWV9 139 aa9.76□□□□□ -0.85
CLDN11-207ENST00000486975 UMAD1C9J7I0 102 aa9.76□□□□□ -0.85
CLDN11-207ENST00000486975 SMLR1H3BR10 107 aa9.76□□□□□ -0.85
CLDN11-207ENST00000486975 ASIPP42127 132 aa9.76□□□□□ -0.85
CLDN11-207ENST00000486975 ERVFC1-1P60608 527 aa9.76□□□□□ -0.85
CLDN11-207ENST00000486975 MSRB1Q9NZV6 116 aa9.76□□□□□ -0.85
CLDN11-207ENST00000486975 S100A4P26447 101 aaKnown RBP9.75□□□□□ -0.85
CLDN11-207ENST00000486975 CRIP1P50238 77 aa9.75□□□□□ -0.85
CLDN11-207ENST00000486975 MBD3L1Q8WWY6 194 aa9.75□□□□□ -0.85
CLDN11-207ENST00000486975 ZC2HC1AQ96GY0 325 aa9.75□□□□□ -0.85
CLDN11-207ENST00000486975 KRTAP4-7Q9BYR0 210 aa9.75□□□□□ -0.85
CLDN11-207ENST00000486975 PARLQ9H300 379 aa9.75□□□□□ -0.85
CLDN11-207ENST00000486975 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
CLDN11-207ENST00000486975 HSPG2P98160 4391 aa9.75□□□□□ -0.85
CLDN11-207ENST00000486975 IGHV3-38A0A0C4DH36 116 aa9.74□□□□□ -0.85
CLDN11-207ENST00000486975 A0A0D9SG52 128 aa9.74□□□□□ -0.85
CLDN11-207ENST00000486975 B4DEV8 164 aa9.74□□□□□ -0.85
CLDN11-207ENST00000486975 KRBOX1C9JBD0 128 aa9.74□□□□□ -0.85
CLDN11-207ENST00000486975 UBE2G1P62253 170 aa9.74□□□□□ -0.85
CLDN11-207ENST00000486975 LINC01556Q5JQF7 62 aa9.74□□□□□ -0.85
CLDN11-207ENST00000486975 OR11H4Q8NGC9 324 aa9.74□□□□□ -0.85
CLDN11-207ENST00000486975 BCL2L11O43521 198 aa9.73□□□□□ -0.85
CLDN11-207ENST00000486975 SH2D1AO60880 128 aa9.73□□□□□ -0.85
CLDN11-207ENST00000486975 LTAP01374 205 aa9.73□□□□□ -0.85
CLDN11-207ENST00000486975 CRYGDP07320 174 aa9.73□□□□□ -0.85
CLDN11-207ENST00000486975 ZNF674Q2M3X9 581 aa9.73□□□□□ -0.85
CLDN11-207ENST00000486975 FAM162BQ5T6X4 162 aa9.73□□□□□ -0.85
CLDN11-207ENST00000486975 LELP1Q5T871 98 aa9.73□□□□□ -0.85
CLDN11-207ENST00000486975 CST9LP1Q5W188 147 aa9.73□□□□□ -0.85
CLDN11-207ENST00000486975 UFSP1Q6NVU6 142 aa9.73□□□□□ -0.85
CLDN11-207ENST00000486975 A0A087WTM6 91 aa9.72□□□□□ -0.85
CLDN11-207ENST00000486975 IGHV3-73A0A0B4J1V6 119 aa9.72□□□□□ -0.85
CLDN11-207ENST00000486975 TRAV8-6A0A0B4J262 113 aa9.72□□□□□ -0.85
CLDN11-207ENST00000486975 LINC00694P0DN24 101 aa9.72□□□□□ -0.85
CLDN11-207ENST00000486975 EIF5AP63241 154 aaKnown RBP9.72□□□□□ -0.85
CLDN11-207ENST00000486975 SYT8Q8NBV8 401 aa9.72□□□□□ -0.85
CLDN11-207ENST00000486975 FAM213BQ8TBF2 198 aa9.72□□□□□ -0.85
CLDN11-207ENST00000486975 ZNF471Q9BX82 626 aaPredicted RBP9.72□□□□□ -0.85
CLDN11-207ENST00000486975 GTSF1LQ9H1H1 148 aa9.72□□□□□ -0.85
CLDN11-207ENST00000486975 KANTRA0A1W2PQU2 76 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms