RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, human

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRD-215	ENST00000485883	VPS13B	Q7Z7G8	4022 aa		13.76	□□□□□ -0.21
CHRD-215	ENST00000485883	TRAV4	A0A0B4J268	109 aa		13.76	□□□□□ -0.21
CHRD-215	ENST00000485883	FHIT	P49789	147 aa		13.76	□□□□□ -0.21
CHRD-215	ENST00000485883		Q86TA4	180 aa		13.76	□□□□□ -0.21
CHRD-215	ENST00000485883	NFE4	Q86UQ8	179 aa		13.76	□□□□□ -0.21
CHRD-215	ENST00000485883	FAM213B	Q8TBF2	198 aa		13.76	□□□□□ -0.21
CHRD-215	ENST00000485883	TCEAL7	Q9BRU2	100 aa		13.76	□□□□□ -0.21
CHRD-215	ENST00000485883	ARL2-SNX15	V9GYD0	113 aa		13.76	□□□□□ -0.21
CHRD-215	ENST00000485883	GYPE	P15421	78 aa		13.75	□□□□□ -0.21
CHRD-215	ENST00000485883	SRI	P30626	198 aa		13.75	□□□□□ -0.21
CHRD-215	ENST00000485883	OR4C5	Q8NGB2	326 aa		13.75	□□□□□ -0.21
CHRD-215	ENST00000485883	C11orf21	Q9P2W6	132 aa		13.75	□□□□□ -0.21
CHRD-215	ENST00000485883	TRAV9-2	A0A087WT02	112 aa		13.74	□□□□□ -0.21
CHRD-215	ENST00000485883	INAFM2	P0DMQ5	153 aa		13.74	□□□□□ -0.21
CHRD-215	ENST00000485883	TPT1	P13693	172 aa	Known RBP	13.74	□□□□□ -0.21
CHRD-215	ENST00000485883	CST9LP1	Q5W188	147 aa		13.74	□□□□□ -0.21
CHRD-215	ENST00000485883	DPPA3	Q6W0C5	159 aa		13.74	□□□□□ -0.21
CHRD-215	ENST00000485883	TMUB2	Q71RG4	321 aa		13.74	□□□□□ -0.21
CHRD-215	ENST00000485883	SFT2D1	Q8WV19	159 aa		13.74	□□□□□ -0.21
CHRD-215	ENST00000485883	MSRB1	Q9NZV6	116 aa		13.74	□□□□□ -0.21
CHRD-215	ENST00000485883	UBE2G1	P62253	170 aa		13.73	□□□□□ -0.21
CHRD-215	ENST00000485883		Q5VSD8	79 aa		13.73	□□□□□ -0.21
CHRD-215	ENST00000485883	PCNP	Q8WW12	178 aa	Known RBP	13.73	□□□□□ -0.21
CHRD-215	ENST00000485883	MBD3L1	Q8WWY6	194 aa		13.73	□□□□□ -0.21
CHRD-215	ENST00000485883	FMC1	Q96HJ9	113 aa		13.73	□□□□□ -0.21
CHRD-215	ENST00000485883	ZFP30	Q9Y2G7	519 aa		13.72	□□□□□ -0.21
CHRD-215	ENST00000485883	LOC100131303	A0A0U1RQF7	123 aa		13.71	□□□□□ -0.21
CHRD-215	ENST00000485883	FABP5P3	A8MUU1	101 aa		13.71	□□□□□ -0.21
CHRD-215	ENST00000485883		C9JCJ5	164 aa		13.71	□□□□□ -0.21
CHRD-215	ENST00000485883	PAGE4	O60829	102 aa		13.71	□□□□□ -0.21
CHRD-215	ENST00000485883	ORM1	P02763	201 aa		13.71	□□□□□ -0.21
CHRD-215	ENST00000485883	EVI2A	P22794	236 aa		13.71	□□□□□ -0.21
CHRD-215	ENST00000485883	ZNF876P	Q49A33	203 aa		13.71	□□□□□ -0.21
CHRD-215	ENST00000485883	TCTE3	Q8IZS6	198 aa		13.71	□□□□□ -0.21
CHRD-215	ENST00000485883	C9orf85	Q96MD7	179 aa		13.71	□□□□□ -0.21
CHRD-215	ENST00000485883	MYCBP2	O75592	4640 aa		13.7	□□□□□ -0.22
CHRD-215	ENST00000485883	DNAH8	Q96JB1	4490 aa		13.7	□□□□□ -0.22
CHRD-215	ENST00000485883		A0A1B0GV50	99 aa		13.7	□□□□□ -0.22
CHRD-215	ENST00000485883	SMR3B	P02814	79 aa	Predicted RBP	13.7	□□□□□ -0.22
CHRD-215	ENST00000485883	H2AFB1	P0C5Y9	115 aa		13.7	□□□□□ -0.22
CHRD-215	ENST00000485883	AKR1C3	P42330	323 aa		13.7	□□□□□ -0.22
CHRD-215	ENST00000485883	HAMP	P81172	84 aa		13.7	□□□□□ -0.22
CHRD-215	ENST00000485883	TRBV6-1	A0A0K0K1D8	114 aa		13.69	□□□□□ -0.22
CHRD-215	ENST00000485883	CRYGD	P07320	174 aa		13.69	□□□□□ -0.22
CHRD-215	ENST00000485883	S100A4	P26447	101 aa	Known RBP	13.69	□□□□□ -0.22
CHRD-215	ENST00000485883	EIF5AL1	Q6IS14	154 aa	Known RBP	13.69	□□□□□ -0.22
CHRD-215	ENST00000485883	CIDEA	O60543	219 aa		13.68	□□□□□ -0.22
CHRD-215	ENST00000485883	ASIP	P42127	132 aa		13.68	□□□□□ -0.22
CHRD-215	ENST00000485883	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.68	□□□□□ -0.22
CHRD-215	ENST00000485883	COX8C	Q7Z4L0	72 aa		13.68	□□□□□ -0.22
CHRD-215	ENST00000485883	FRZB	Q92765	325 aa		13.68	□□□□□ -0.22
CHRD-215	ENST00000485883	PTH2	Q96A98	100 aa		13.68	□□□□□ -0.22
CHRD-215	ENST00000485883	TXNDC17	Q9BRA2	123 aa		13.68	□□□□□ -0.22
CHRD-215	ENST00000485883	IGKV3D-20	A0A0C4DH25	116 aa		13.67	□□□□□ -0.22
CHRD-215	ENST00000485883	RS1	O15537	224 aa		13.67	□□□□□ -0.22
CHRD-215	ENST00000485883	RNASE3	P12724	160 aa	Known RBP	13.67	□□□□□ -0.22
CHRD-215	ENST00000485883	GATA1	P15976	413 aa	Predicted RBP	13.67	□□□□□ -0.22
CHRD-215	ENST00000485883	GCSH	P23434	173 aa		13.67	□□□□□ -0.22
CHRD-215	ENST00000485883		Q6ZNX1	250 aa		13.67	□□□□□ -0.22
CHRD-215	ENST00000485883	ZC2HC1A	Q96GY0	325 aa		13.67	□□□□□ -0.22
CHRD-215	ENST00000485883		B4DEV8	164 aa		13.66	□□□□□ -0.22
CHRD-215	ENST00000485883		K7EP13	123 aa		13.66	□□□□□ -0.22
CHRD-215	ENST00000485883	LTA	P01374	205 aa		13.66	□□□□□ -0.22
CHRD-215	ENST00000485883	RAB5C	P51148	216 aa		13.66	□□□□□ -0.22
CHRD-215	ENST00000485883	ZNF506	Q5JVG8	444 aa		13.66	□□□□□ -0.22
CHRD-215	ENST00000485883	FAM162B	Q5T6X4	162 aa		13.66	□□□□□ -0.22
CHRD-215	ENST00000485883	PGPEP1L	A6NFU8	196 aa		13.65	□□□□□ -0.22
CHRD-215	ENST00000485883	SH2D1A	O60880	128 aa		13.65	□□□□□ -0.22
CHRD-215	ENST00000485883	S100A9	P06702	114 aa	Known RBP	13.65	□□□□□ -0.22
CHRD-215	ENST00000485883	CFAP126	Q5VTH2	177 aa		13.65	□□□□□ -0.22
CHRD-215	ENST00000485883	SH2D6	Q7Z4S9	175 aa		13.65	□□□□□ -0.22
CHRD-215	ENST00000485883	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.64	□□□□□ -0.23
CHRD-215	ENST00000485883		M0R036	132 aa		13.64	□□□□□ -0.23
CHRD-215	ENST00000485883	C1QB	P02746	253 aa		13.64	□□□□□ -0.23
CHRD-215	ENST00000485883	CRIP1	P50238	77 aa		13.64	□□□□□ -0.23
CHRD-215	ENST00000485883	FLG2	Q5D862	2391 aa	Predicted RBP	13.64	□□□□□ -0.23
CHRD-215	ENST00000485883	SCO2	A0A1W2PP80	73 aa		13.63	□□□□□ -0.23
CHRD-215	ENST00000485883	LRCOL1	A6NCL2	159 aa		13.63	□□□□□ -0.23
CHRD-215	ENST00000485883	TEX46	H3BTG2	121 aa		13.63	□□□□□ -0.23
CHRD-215	ENST00000485883	PIK3CD-AS1	Q5SR53	167 aa		13.63	□□□□□ -0.23
CHRD-215	ENST00000485883	C10orf126	Q8N4M7	172 aa		13.63	□□□□□ -0.23
CHRD-215	ENST00000485883	NHLRC2	Q8NBF2	726 aa		13.63	□□□□□ -0.23
CHRD-215	ENST00000485883	PRADC1	Q9BSG0	188 aa		13.63	□□□□□ -0.23
CHRD-215	ENST00000485883	MANBAL	Q9NQG1	85 aa		13.63	□□□□□ -0.23
CHRD-215	ENST00000485883	IL36B	Q9NZH7	164 aa		13.63	□□□□□ -0.23
CHRD-215	ENST00000485883	IGHV3-38	A0A0C4DH36	116 aa		13.62	□□□□□ -0.23
CHRD-215	ENST00000485883	KRBOX1	C9JBD0	128 aa		13.62	□□□□□ -0.23
CHRD-215	ENST00000485883	RHOH	Q15669	191 aa		13.62	□□□□□ -0.23
CHRD-215	ENST00000485883	ZNF674	Q2M3X9	581 aa		13.62	□□□□□ -0.23
CHRD-215	ENST00000485883	IGLV5-52	A0A0A0MRZ9	124 aa		13.61	□□□□□ -0.23
CHRD-215	ENST00000485883	IGHV3-73	A0A0B4J1V6	119 aa		13.61	□□□□□ -0.23
CHRD-215	ENST00000485883	TRAV1-1	A0A0B4J248	108 aa		13.61	□□□□□ -0.23
CHRD-215	ENST00000485883	TRBV6-4	A0A1B0GX49	114 aa		13.61	□□□□□ -0.23
CHRD-215	ENST00000485883		A8MWV9	139 aa		13.61	□□□□□ -0.23
CHRD-215	ENST00000485883		H3BVH4	76 aa		13.61	□□□□□ -0.23
CHRD-215	ENST00000485883	LINC01559	Q495D7	138 aa		13.61	□□□□□ -0.23
CHRD-215	ENST00000485883	DNLZ	Q5SXM8	178 aa		13.61	□□□□□ -0.23
CHRD-215	ENST00000485883	AKAP14	Q86UN6	197 aa		13.61	□□□□□ -0.23
CHRD-215	ENST00000485883	SLC51B	Q86UW2	128 aa		13.61	□□□□□ -0.23
CHRD-215	ENST00000485883	SLC25A29	Q8N8R3	303 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms