RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 TMEM106BQ9NUM4 274 aa3.76□□□□□ -1.81
RBM39-233ENST00000482563 CPSF1Q10570 1443 aaKnown RBP3.76□□□□□ -1.81
RBM39-233ENST00000482563 C10orf71Q711Q0 1435 aa3.76□□□□□ -1.81
RBM39-233ENST00000482563 COX7CP15954 63 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 SLC48A1Q6P1K1 146 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 VAMP8Q9BV40 100 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 CYTL1Q9NRR1 136 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 PCNX2A6NKB5 2137 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 DISP1Q96F81 1524 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 BRWD1Q9NSI6 2320 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 TRBV6-8A0A0A6YYG3 113 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 CCL16O15467 120 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 IGHV3-33P01772 117 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 IGLC1P0CG04 106 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 POLR2JP52435 117 aaKnown RBP3.75□□□□□ -1.81
RBM39-233ENST00000482563 RHOHQ15669 191 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 C9orf116Q5BN46 136 aaPredicted RBP3.75□□□□□ -1.81
RBM39-233ENST00000482563 OR10AG1Q8NH19 301 aa3.75□□□□□ -1.81
RBM39-233ENST00000482563 F8W1H4 67 aa3.74□□□□□ -1.81
RBM39-233ENST00000482563 ZNF431Q8TF32 576 aaPredicted RBP3.74□□□□□ -1.81
RBM39-233ENST00000482563 NINQ8N4C6 2090 aa3.74□□□□□ -1.81
RBM39-233ENST00000482563 UBE2L5PA0A1B0GUS4 154 aa3.73□□□□□ -1.81
RBM39-233ENST00000482563 CBLN1P23435 193 aa3.73□□□□□ -1.81
RBM39-233ENST00000482563 UBE2L3P68036 154 aaKnown RBP3.73□□□□□ -1.81
RBM39-233ENST00000482563 DCDP81605 110 aaKnown RBP3.73□□□□□ -1.81
RBM39-233ENST00000482563 PPDPFLQ8WWR9 84 aa3.73□□□□□ -1.81
RBM39-233ENST00000482563 LINC00474Q9P2X8 69 aa3.73□□□□□ -1.81
RBM39-233ENST00000482563 KDM5AP29375 1690 aaKnown RBP3.73□□□□□ -1.81
RBM39-233ENST00000482563 SHROOM3Q8TF72 1996 aa3.73□□□□□ -1.81
RBM39-233ENST00000482563 CEP192Q8TEP8 1941 aa3.73□□□□□ -1.81
RBM39-233ENST00000482563 IGKV2-24A0A0C4DH68 120 aa3.73□□□□□ -1.81
RBM39-233ENST00000482563 LYPD5Q6UWN5 251 aa3.73□□□□□ -1.81
RBM39-233ENST00000482563 LIMD2Q9BT23 127 aa3.73□□□□□ -1.81
RBM39-233ENST00000482563 BAZ1AQ9NRL2 1556 aaPredicted RBP3.72□□□□□ -1.81
RBM39-233ENST00000482563 PTPRFP10586 1907 aa3.72□□□□□ -1.81
RBM39-233ENST00000482563 H3BRN7 92 aa3.72□□□□□ -1.81
RBM39-233ENST00000482563 RNASE3P12724 160 aaKnown RBP3.72□□□□□ -1.81
RBM39-233ENST00000482563 LINC00304Q8N9R0 145 aa3.72□□□□□ -1.81
RBM39-233ENST00000482563 C10orf82Q8WW14 230 aa3.72□□□□□ -1.81
RBM39-233ENST00000482563 SNRNP200O75643 2136 aaKnown RBP3.72□□□□□ -1.81
RBM39-233ENST00000482563 ARHGAP35Q9NRY4 1499 aa3.71□□□□□ -1.82
RBM39-233ENST00000482563 KRTAP10-6P60371 365 aaPredicted RBP3.71□□□□□ -1.82
RBM39-233ENST00000482563 IQCJQ1A5X6 159 aa3.71□□□□□ -1.82
RBM39-233ENST00000482563 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
RBM39-233ENST00000482563 SPTSSBQ8NFR3 76 aa3.71□□□□□ -1.82
RBM39-233ENST00000482563 ABCA3Q99758 1704 aa3.71□□□□□ -1.82
RBM39-233ENST00000482563 BAZ2BQ9UIF8 2168 aaKnown RBP3.7□□□□□ -1.82
RBM39-233ENST00000482563 CCKP06307 115 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 LINC00032P0C843 101 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 Q0VG73 95 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 COMMD6Q7Z4G1 85 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 TTTY12Q9BZ98 90 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 ORMDL1Q9P0S3 153 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 LAMB1P07942 1786 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 CCDC18Q5T9S5 1454 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 UNC13CQ8NB66 2214 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 DAPK1P53355 1430 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 A0A1B0GVY2 172 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 SSSCA1O60232 199 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 NPVFQ9HCQ7 196 aa3.7□□□□□ -1.82
RBM39-233ENST00000482563 MED12LQ86YW9 2145 aa3.69□□□□□ -1.82
RBM39-233ENST00000482563 IFT140Q96RY7 1462 aa3.69□□□□□ -1.82
RBM39-233ENST00000482563 FYCO1Q9BQS8 1478 aa3.69□□□□□ -1.82
RBM39-233ENST00000482563 MYOFQ9NZM1 2061 aa3.69□□□□□ -1.82
RBM39-233ENST00000482563 WNK3Q9BYP7 1800 aa3.69□□□□□ -1.82
RBM39-233ENST00000482563 TRGV4A0A0C4DH28 118 aa3.69□□□□□ -1.82
RBM39-233ENST00000482563 TMEM30CPA0ZSE6 113 aa3.69□□□□□ -1.82
RBM39-233ENST00000482563 AP4S1Q9Y587 144 aa3.69□□□□□ -1.82
RBM39-233ENST00000482563 SCAPERQ9BY12 1400 aa3.68□□□□□ -1.82
RBM39-233ENST00000482563 RNASE2P10153 161 aaKnown RBP3.68□□□□□ -1.82
RBM39-233ENST00000482563 KRTAP10-8P60410 259 aa3.68□□□□□ -1.82
RBM39-233ENST00000482563 UNQ5815/PRO19632Q6UWF5 114 aa3.68□□□□□ -1.82
RBM39-233ENST00000482563 ODF3Q96PU9 254 aa3.68□□□□□ -1.82
RBM39-233ENST00000482563 DOCK10Q96BY6 2186 aa3.67□□□□□ -1.82
RBM39-233ENST00000482563 H3BQ15 152 aa3.67□□□□□ -1.82
RBM39-233ENST00000482563 GNGT2O14610 69 aa3.67□□□□□ -1.82
RBM39-233ENST00000482563 ATP5EP56381 51 aaPredicted RBP3.67□□□□□ -1.82
RBM39-233ENST00000482563 IFI27L1Q96BM0 104 aa3.67□□□□□ -1.82
RBM39-233ENST00000482563 SHROOM2Q13796 1616 aa3.67□□□□□ -1.82
RBM39-233ENST00000482563 C10orf55Q5SWW7 151 aa3.67□□□□□ -1.82
RBM39-233ENST00000482563 RPL7L1Q6DKI1 246 aaKnown RBP3.67□□□□□ -1.82
RBM39-233ENST00000482563 HCP5Q6MZN7 132 aa3.67□□□□□ -1.82
RBM39-233ENST00000482563 DOCK1Q14185 1865 aa3.66□□□□□ -1.82
RBM39-233ENST00000482563 hADV29S1A0JD25 119 aa3.66□□□□□ -1.82
RBM39-233ENST00000482563 C4orf3Q8WVX3 66 aa3.66□□□□□ -1.82
RBM39-233ENST00000482563 ATG5Q9H1Y0 275 aa3.66□□□□□ -1.82
RBM39-233ENST00000482563 C22orf24Q9Y442 160 aa3.66□□□□□ -1.82
RBM39-233ENST00000482563 ARAP2Q8WZ64 1704 aa3.65□□□□□ -1.82
RBM39-233ENST00000482563 GAPVD1Q14C86 1478 aa3.65□□□□□ -1.82
RBM39-233ENST00000482563 HCG22E2RYF7 251 aa3.65□□□□□ -1.82
RBM39-233ENST00000482563 MRPL35Q9NZE8 188 aaKnown RBP3.65□□□□□ -1.82
RBM39-233ENST00000482563 FN1P02751 2386 aaKnown RBP3.65□□□□□ -1.83
RBM39-233ENST00000482563 ANKRD36BQ8N2N9 1353 aa3.65□□□□□ -1.83
RBM39-233ENST00000482563 IGKV3-7A0A075B6H7 116 aa3.64□□□□□ -1.83
RBM39-233ENST00000482563 A0A0J9YY99 117 aa3.64□□□□□ -1.83
RBM39-233ENST00000482563 TRBV6-4A0A1B0GX49 114 aa3.64□□□□□ -1.83
RBM39-233ENST00000482563 NUPR2A6NF83 97 aa3.64□□□□□ -1.83
RBM39-233ENST00000482563 A6NIN4 97 aa3.64□□□□□ -1.83
RBM39-233ENST00000482563 LCN9Q8WX39 176 aa3.64□□□□□ -1.83
RBM39-233ENST00000482563 PLEKHH2Q8IVE3 1493 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 237.2 ms