RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 FA2HQ7L5A8 372 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 TMEM219Q86XT9 240 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 ORMDL3Q8N138 153 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 TMEM191AQ9H0A3 160 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 RETNQ9HD89 108 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 UQCR10Q9UDW1 63 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 SELENOKQ9Y6D0 94 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 HRNRQ86YZ3 2850 aaPredicted RBP5.83□□□□□ -1.48
SNX13-208ENST00000482558 CHD6Q8TD26 2715 aa5.82□□□□□ -1.48
SNX13-208ENST00000482558 TRAV9-2A0A087WT02 112 aa5.82□□□□□ -1.48
SNX13-208ENST00000482558 ORM1P02763 201 aa5.82□□□□□ -1.48
SNX13-208ENST00000482558 IGHV4-38-2P0DP08 117 aa5.82□□□□□ -1.48
SNX13-208ENST00000482558 HOXD3P31249 432 aaPredicted RBP5.82□□□□□ -1.48
SNX13-208ENST00000482558 BRD3OSQ6XYD6 125 aa5.82□□□□□ -1.48
SNX13-208ENST00000482558 SPATA12Q7Z6I5 190 aa5.82□□□□□ -1.48
SNX13-208ENST00000482558 NEXN-AS1Q8NBZ9 246 aa5.82□□□□□ -1.48
SNX13-208ENST00000482558 OR10J6PQ8NGY7 276 aa5.82□□□□□ -1.48
SNX13-208ENST00000482558 OR10AG1Q8NH19 301 aa5.82□□□□□ -1.48
SNX13-208ENST00000482558 PRSS3P2Q8NHM4 247 aa5.82□□□□□ -1.48
SNX13-208ENST00000482558 VGLL1Q99990 258 aa5.82□□□□□ -1.48
SNX13-208ENST00000482558 UFC1Q9Y3C8 167 aa5.82□□□□□ -1.48
SNX13-208ENST00000482558 SMG1Q96Q15 3661 aaKnown RBP5.81□□□□□ -1.48
SNX13-208ENST00000482558 C2orf70A6NJV1 201 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 TWIST1Q15672 202 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 SPATA45Q537H7 98 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 PRSS57Q6UWY2 283 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 GPHB5Q86YW7 130 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 MTURNQ8N3F0 131 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 FAM19A2Q8N3H0 131 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 Q8N976 141 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 OR4X2Q8NGF9 303 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 PRELID3AQ96N28 172 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 AGPAT4-IT1Q9H0P7 198 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 ST20Q9HBF5 79 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 DAZ1Q9NQZ3 744 aaKnown RBP5.81□□□□□ -1.48
SNX13-208ENST00000482558 ITPR1Q14643 2758 aa5.81□□□□□ -1.48
SNX13-208ENST00000482558 IGHV4-4A0A075B6R2 117 aa5.8□□□□□ -1.48
SNX13-208ENST00000482558 IGHV3OR16-10A0A075B7F0 116 aa5.8□□□□□ -1.48
SNX13-208ENST00000482558 TRAV8-2A0A0B4J237 113 aa5.8□□□□□ -1.48
SNX13-208ENST00000482558 TRAV21A0A0B4J279 112 aa5.8□□□□□ -1.48
SNX13-208ENST00000482558 IGHV1-24A0A0C4DH33 117 aa5.8□□□□□ -1.48
SNX13-208ENST00000482558 IGHV7-4-1A0A0J9YVY3 117 aa5.8□□□□□ -1.48
SNX13-208ENST00000482558 SYS1-DBNDD2H3BUS1 97 aa5.8□□□□□ -1.48
SNX13-208ENST00000482558 CKS2P33552 79 aa5.8□□□□□ -1.48
SNX13-208ENST00000482558 LY6EQ16553 131 aa5.8□□□□□ -1.48
SNX13-208ENST00000482558 ZNF705AQ6ZN79 300 aaPredicted RBP5.8□□□□□ -1.48
SNX13-208ENST00000482558 DEFB125Q8N687 156 aa5.8□□□□□ -1.48
SNX13-208ENST00000482558 MS4A6AQ9H2W1 248 aa5.8□□□□□ -1.48
SNX13-208ENST00000482558 NXT2Q9NPJ8 142 aaKnown RBP5.8□□□□□ -1.48
SNX13-208ENST00000482558 LRBAP50851 2863 aa5.79□□□□□ -1.48
SNX13-208ENST00000482558 IGHV3-35A0A0C4DH35 117 aa5.79□□□□□ -1.48
SNX13-208ENST00000482558 LINC01546A6NGU7 62 aa5.79□□□□□ -1.48
SNX13-208ENST00000482558 TCF21O43680 179 aa5.79□□□□□ -1.48
SNX13-208ENST00000482558 PPP1R17O96001 155 aa5.79□□□□□ -1.48
SNX13-208ENST00000482558 IGLC3P0DOY3 106 aa5.79□□□□□ -1.48
SNX13-208ENST00000482558 LEPP41159 167 aa5.79□□□□□ -1.48
SNX13-208ENST00000482558 RPL24P83731 157 aaKnown RBP5.79□□□□□ -1.48
SNX13-208ENST00000482558 EBLN2Q6P2I7 272 aa5.79□□□□□ -1.48
SNX13-208ENST00000482558 URB1-AS1Q96HZ7 61 aa5.79□□□□□ -1.48
SNX13-208ENST00000482558 PMCHL2Q9BQD1 86 aa5.79□□□□□ -1.48
SNX13-208ENST00000482558 MAP1LC3AQ9H492 121 aa5.79□□□□□ -1.48
SNX13-208ENST00000482558 MRPS16Q9Y3D3 137 aaKnown RBP5.79□□□□□ -1.48
SNX13-208ENST00000482558 TMSB15BA0A087X1C1 80 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 A0A096LNT2 108 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 D6R8Y8 96 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 K7EMI3 77 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 LGALS9O00182 355 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 SOCS3O14543 225 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 HBDP02042 147 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 RPL35AP18077 110 aaKnown RBP5.78□□□□□ -1.48
SNX13-208ENST00000482558 PSMB8P28062 276 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 ZNF80P51504 273 aaPredicted RBP5.78□□□□□ -1.48
SNX13-208ENST00000482558 SRSF1Q07955 248 aaKnown RBP eCLIP5.78□□□□□ -1.48
SNX13-208ENST00000482558 MRPL51Q4U2R6 128 aaKnown RBP5.78□□□□□ -1.48
SNX13-208ENST00000482558 ZNF843Q8N446 348 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 Q8TAT8 98 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 ODF3Q96PU9 254 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 OVOL2Q9BRP0 275 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 SMPXQ9UHP9 88 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 VPREB3Q9UKI3 123 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 MED13LQ71F56 2210 aa5.78□□□□□ -1.48
SNX13-208ENST00000482558 IGHV3OR16-8A0A075B7F1 116 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 IGLV9-49A0A0B4J1Y8 123 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 OR4C46A6NHA9 309 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 LINC01549A6NIU2 74 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 CYSRT1A8MQ03 144 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 PRAC2D3DTV9 90 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 G0S2P27469 103 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 HLA-DMBP28068 263 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 HNRNPA3P51991 378 aaKnown RBP5.77□□□□□ -1.49
SNX13-208ENST00000482558 BLCAPP62952 87 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 ERCC8Q13216 396 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 DEFB113Q30KQ7 82 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 DEFB112Q30KQ8 113 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 COL5A1-AS1Q5SY13 56 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 LINC01545Q5VT33 79 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 AMN1Q8IY45 258 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 TMEM86BQ8N661 226 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 RNF182Q8N6D2 247 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 MRAP2Q96G30 205 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms